RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 GTF2E1P29083 439 aaPredicted RBP19.32■□□□□ 0.68
UBXN1-218ENST00000616865 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
UBXN1-218ENST00000616865 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBXN1-218ENST00000616865 HACL1Q9UJ83 578 aa19.32■□□□□ 0.68
UBXN1-218ENST00000616865 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
UBXN1-218ENST00000616865 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
UBXN1-218ENST00000616865 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
UBXN1-218ENST00000616865 NGEFQ8N5V2 710 aa19.31■□□□□ 0.68
UBXN1-218ENST00000616865 NYXQ9GZU5 481 aa19.31■□□□□ 0.68
UBXN1-218ENST00000616865 COL4A5P29400 1685 aa19.3■□□□□ 0.68
UBXN1-218ENST00000616865 RNF123Q5XPI4 1314 aa19.3■□□□□ 0.68
UBXN1-218ENST00000616865 MAP3K15Q6ZN16 1313 aa19.3■□□□□ 0.68
UBXN1-218ENST00000616865 FZD9O00144 591 aa19.3■□□□□ 0.68
UBXN1-218ENST00000616865 EAPPQ56P03 285 aaPredicted RBP19.3■□□□□ 0.68
UBXN1-218ENST00000616865 NUTM1Q86Y26 1132 aa19.3■□□□□ 0.68
UBXN1-218ENST00000616865 PSMD1Q99460 953 aa19.3■□□□□ 0.68
UBXN1-218ENST00000616865 ITGBL1O95965 494 aaPredicted RBP19.29■□□□□ 0.68
UBXN1-218ENST00000616865 EPHX2P34913 555 aa19.29■□□□□ 0.68
UBXN1-218ENST00000616865 EIF4A1P60842 406 aaKnown RBP19.29■□□□□ 0.68
UBXN1-218ENST00000616865 KIF6Q6ZMV9 814 aa19.29■□□□□ 0.68
UBXN1-218ENST00000616865 SYNE4Q8N205 404 aa19.29■□□□□ 0.68
UBXN1-218ENST00000616865 LTBP1Q14766 1721 aa19.28■□□□□ 0.68
UBXN1-218ENST00000616865 UBN2Q6ZU65 1347 aa19.28■□□□□ 0.68
UBXN1-218ENST00000616865 TTLL7Q6ZT98 887 aa19.28■□□□□ 0.68
UBXN1-218ENST00000616865 GPC2Q8N158 579 aa19.28■□□□□ 0.68
UBXN1-218ENST00000616865 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
UBXN1-218ENST00000616865 TMEM88BA6NKF7 163 aa19.27■□□□□ 0.68
UBXN1-218ENST00000616865 PNMA8AQ86V59 439 aaPredicted RBP19.27■□□□□ 0.68
UBXN1-218ENST00000616865 MYL6BP14649 208 aa19.26■□□□□ 0.67
UBXN1-218ENST00000616865 CALD1Q05682 793 aaKnown RBP19.26■□□□□ 0.67
UBXN1-218ENST00000616865 CC2D2BQ6DHV5 1058 aa19.26■□□□□ 0.67
UBXN1-218ENST00000616865 JDP2Q8WYK2 163 aa19.26■□□□□ 0.67
UBXN1-218ENST00000616865 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
UBXN1-218ENST00000616865 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
UBXN1-218ENST00000616865 CLEC11AQ9Y240 323 aa19.26■□□□□ 0.67
UBXN1-218ENST00000616865 ANKRD36CQ5JPF3 1778 aa19.25■□□□□ 0.67
UBXN1-218ENST00000616865 GPTP24298 496 aa19.25■□□□□ 0.67
UBXN1-218ENST00000616865 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
UBXN1-218ENST00000616865 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
UBXN1-218ENST00000616865 ZBTB3Q9H5J0 574 aa19.25■□□□□ 0.67
UBXN1-218ENST00000616865 TRIM35Q9UPQ4 493 aa19.25■□□□□ 0.67
UBXN1-218ENST00000616865 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
UBXN1-218ENST00000616865 FOXN1O15353 648 aa19.24■□□□□ 0.67
UBXN1-218ENST00000616865 NTSR2O95665 410 aa19.24■□□□□ 0.67
UBXN1-218ENST00000616865 VEGFBP49765 207 aa19.24■□□□□ 0.67
UBXN1-218ENST00000616865 CCDC27Q2M243 656 aa19.24■□□□□ 0.67
UBXN1-218ENST00000616865 SUSD4Q5VX71 490 aa19.24■□□□□ 0.67
UBXN1-218ENST00000616865 EIF6P56537 245 aaKnown RBP19.23■□□□□ 0.67
UBXN1-218ENST00000616865 GRIPAP1Q4V328 841 aa19.23■□□□□ 0.67
UBXN1-218ENST00000616865 MAP1SQ66K74 1059 aaPredicted RBP19.23■□□□□ 0.67
UBXN1-218ENST00000616865 ZNF34Q8IZ26 560 aa19.23■□□□□ 0.67
UBXN1-218ENST00000616865 CNTROBQ8N137 903 aa19.23■□□□□ 0.67
UBXN1-218ENST00000616865 LAMB2P55268 1798 aa19.22■□□□□ 0.67
UBXN1-218ENST00000616865 PPEF1O14829 653 aaPredicted RBP19.22■□□□□ 0.67
UBXN1-218ENST00000616865 GIGYF2Q6Y7W6 1299 aaKnown RBP19.22■□□□□ 0.67
UBXN1-218ENST00000616865 WWC1Q8IX03 1113 aa19.22■□□□□ 0.67
UBXN1-218ENST00000616865 CRAMP1Q96RY5 1269 aa19.22■□□□□ 0.67
UBXN1-218ENST00000616865 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
UBXN1-218ENST00000616865 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
UBXN1-218ENST00000616865 RASSF10A6NK89 507 aa19.21■□□□□ 0.67
UBXN1-218ENST00000616865 SLC51AQ86UW1 340 aa19.21■□□□□ 0.67
UBXN1-218ENST00000616865 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
UBXN1-218ENST00000616865 PRDM10Q9NQV6 1147 aa19.21■□□□□ 0.67
UBXN1-218ENST00000616865 GJA3Q9Y6H8 435 aa19.21■□□□□ 0.67
UBXN1-218ENST00000616865 LMOD1P29536 600 aaPredicted RBP19.2■□□□□ 0.66
UBXN1-218ENST00000616865 SCNN1DP51172 638 aa19.2■□□□□ 0.66
UBXN1-218ENST00000616865 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
UBXN1-218ENST00000616865 LRP10Q7Z4F1 713 aa19.2■□□□□ 0.66
UBXN1-218ENST00000616865 LARGE2Q8N3Y3 721 aa19.2■□□□□ 0.66
UBXN1-218ENST00000616865 AIDAQ96BJ3 306 aa19.2■□□□□ 0.66
UBXN1-218ENST00000616865 CTCFP49711 727 aaPredicted RBP19.19■□□□□ 0.66
UBXN1-218ENST00000616865 PARP10Q53GL7 1025 aa19.19■□□□□ 0.66
UBXN1-218ENST00000616865 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
UBXN1-218ENST00000616865 WDR63Q8IWG1 891 aa19.19■□□□□ 0.66
UBXN1-218ENST00000616865 TSPYL4Q9UJ04 414 aa19.19■□□□□ 0.66
UBXN1-218ENST00000616865 TRPM7Q96QT4 1865 aa19.19■□□□□ 0.66
UBXN1-218ENST00000616865 DEFB115Q30KQ5 88 aa19.18■□□□□ 0.66
UBXN1-218ENST00000616865 WBP1LQ9NX94 342 aa19.18■□□□□ 0.66
UBXN1-218ENST00000616865 TCERG1O14776 1098 aaKnown RBP19.17■□□□□ 0.66
UBXN1-218ENST00000616865 PDIA6Q15084 440 aa19.17■□□□□ 0.66
UBXN1-218ENST00000616865 NIM1KQ8IY84 436 aa19.17■□□□□ 0.66
UBXN1-218ENST00000616865 NLRP3Q96P20 1036 aa19.17■□□□□ 0.66
UBXN1-218ENST00000616865 DDX21Q9NR30 783 aaKnown RBP eCLIP19.17■□□□□ 0.66
UBXN1-218ENST00000616865 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
UBXN1-218ENST00000616865 EPS15P42566 896 aa19.16■□□□□ 0.66
UBXN1-218ENST00000616865 GNAI1P63096 354 aa19.16■□□□□ 0.66
UBXN1-218ENST00000616865 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
UBXN1-218ENST00000616865 ABT1Q9ULW3 272 aaKnown RBP19.16■□□□□ 0.66
UBXN1-218ENST00000616865 ABCC4O15439 1325 aa19.16■□□□□ 0.66
UBXN1-218ENST00000616865 IL16Q14005 1332 aa19.16■□□□□ 0.66
UBXN1-218ENST00000616865 PPIP5K2O43314 1243 aa19.15■□□□□ 0.66
UBXN1-218ENST00000616865 EIF2S2P20042 333 aaKnown RBP19.15■□□□□ 0.66
UBXN1-218ENST00000616865 PROSER3Q2NL68 480 aa19.15■□□□□ 0.66
UBXN1-218ENST00000616865 USP50Q70EL3 339 aaPredicted RBP19.15■□□□□ 0.66
UBXN1-218ENST00000616865 UTP14AQ9BVJ6 771 aaKnown RBP19.15■□□□□ 0.66
UBXN1-218ENST00000616865 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
UBXN1-218ENST00000616865 WDR33Q9C0J8 1336 aaKnown RBP19.15■□□□□ 0.66
UBXN1-218ENST00000616865 AOC3Q16853 763 aa19.14■□□□□ 0.65
UBXN1-218ENST00000616865 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
UBXN1-218ENST00000616865 TMX4Q9H1E5 349 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms