RNA–Protein interactions for RNA: ENST00000616449.1

ACSS3-208, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

Gene ACSS3, Length 3,833 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-208ENST00000616449 CCDC57Q2TAC2 916 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 ZNF594Q96JF6 807 aaPredicted RBP15.09■□□□□ 0.01
ACSS3-208ENST00000616449 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 LINS1Q8NG48 757 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 SSH3Q8TE77 659 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 ERCC4Q92889 916 aaPredicted RBP15.09■□□□□ 0.01
ACSS3-208ENST00000616449 CEP126Q9P2H0 1117 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 FRMPD1Q5SYB0 1578 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 BRD1O95696 1058 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 POLR3DP05423 398 aaPredicted RBP15.09■□□□□ 0.01
ACSS3-208ENST00000616449 IFIT1P09914 478 aaKnown RBP15.09■□□□□ 0.01
ACSS3-208ENST00000616449 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
ACSS3-208ENST00000616449 NLRP1Q9C000 1473 aa15.08■□□□□ 0.01
ACSS3-208ENST00000616449 UBE2HP62256 183 aa15.08■□□□□ 0.01
ACSS3-208ENST00000616449 STK38Q15208 465 aa15.08■□□□□ 0.01
ACSS3-208ENST00000616449 SYNE3Q6ZMZ3 975 aa15.08■□□□□ 0.01
ACSS3-208ENST00000616449 RUFY3Q7L099 469 aa15.08■□□□□ 0.01
ACSS3-208ENST00000616449 ZNF496Q96IT1 587 aaPredicted RBP15.08■□□□□ 0.01
ACSS3-208ENST00000616449 USP16Q9Y5T5 823 aa15.08■□□□□ 0.01
ACSS3-208ENST00000616449 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0
ACSS3-208ENST00000616449 TPD52L1Q16890 204 aaPredicted RBP15.08■□□□□ 0
ACSS3-208ENST00000616449 SLFNL1Q499Z3 407 aa15.08■□□□□ 0
ACSS3-208ENST00000616449 BEND3Q5T5X7 828 aa15.08■□□□□ 0
ACSS3-208ENST00000616449 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
ACSS3-208ENST00000616449 MYO3AQ8NEV4 1616 aa15.08■□□□□ 0
ACSS3-208ENST00000616449 IBTKQ9P2D0 1353 aaPredicted RBP15.08■□□□□ 0
ACSS3-208ENST00000616449 JAK2O60674 1132 aa15.08■□□□□ 0
ACSS3-208ENST00000616449 HSPA4P34932 840 aa15.08■□□□□ 0
ACSS3-208ENST00000616449 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.08■□□□□ 0
ACSS3-208ENST00000616449 RAD50Q92878 1312 aa15.08■□□□□ 0
ACSS3-208ENST00000616449 A0A0D9SFI3 127 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 NRDCO43847 1150 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 SMC2O95347 1197 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 C16orf45Q96MC5 204 aaPredicted RBP15.07■□□□□ 0
ACSS3-208ENST00000616449 Q6ZUG5 572 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 CCAR2Q8N163 923 aaKnown RBP15.07■□□□□ 0
ACSS3-208ENST00000616449 ZKSCAN5Q9Y2L8 839 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 PIK3C2BO00750 1634 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 CD163L1Q9NR16 1453 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 CCDC171Q6TFL3 1326 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 LUZP1Q86V48 1076 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 NEK1Q96PY6 1258 aa15.07■□□□□ 0
ACSS3-208ENST00000616449 NCOA5Q9HCD5 579 aaKnown RBP15.07■□□□□ 0
ACSS3-208ENST00000616449 CDC37L1Q7L3B6 337 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 PIBF1Q8WXW3 757 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 ARHGAP31Q2M1Z3 1444 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 A0A087WWV3 80 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 CHGBP05060 677 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 ZNF445P59923 1031 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 ANKRD1Q15327 319 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 ME3Q16798 604 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 SH2B1Q9NRF2 756 aaPredicted RBP15.06■□□□□ 0
ACSS3-208ENST00000616449 TRMT1Q9NXH9 659 aaKnown RBP15.06■□□□□ 0
ACSS3-208ENST00000616449 ARHGEF10O15013 1369 aa15.06■□□□□ 0
ACSS3-208ENST00000616449 ZC3H13Q5T200 1668 aaKnown RBP15.05■□□□□ 0
ACSS3-208ENST00000616449 GIGYF1O75420 1035 aaPredicted RBP15.05■□□□□ 0
ACSS3-208ENST00000616449 APOBRQ0VD83 1088 aa15.05■□□□□ 0
ACSS3-208ENST00000616449 OTUD7BQ6GQQ9 843 aa15.05■□□□□ 0
ACSS3-208ENST00000616449 FAM177A1Q8N128 213 aaPredicted RBP15.05■□□□□ 0
ACSS3-208ENST00000616449 HSPA2P54652 639 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 CCDC158Q5M9N0 1113 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 ZNF790Q6PG37 636 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 IFNL2Q8IZJ0 200 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 DNAJC25Q9H1X3 360 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 RXRAP19793 462 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 HSP90AA4PQ58FG1 418 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 HOMER1Q86YM7 354 aa15.05■□□□□ -0
ACSS3-208ENST00000616449 DIP2CQ9Y2E4 1556 aa15.04■□□□□ -0
ACSS3-208ENST00000616449 PES1O00541 588 aaKnown RBP15.04■□□□□ -0
ACSS3-208ENST00000616449 A1BGP04217 495 aa15.04■□□□□ -0
ACSS3-208ENST00000616449 LETM1O95202 739 aaPredicted RBP15.04■□□□□ -0
ACSS3-208ENST00000616449 ANO6Q4KMQ2 910 aa15.04■□□□□ -0
ACSS3-208ENST00000616449 SLC27A2O14975 620 aa15.04■□□□□ -0
ACSS3-208ENST00000616449 ZBTB9Q96C00 473 aa15.04■□□□□ -0
ACSS3-208ENST00000616449 INTS4Q96HW7 963 aaKnown RBP15.04■□□□□ -0
ACSS3-208ENST00000616449 SNRPA1P09661 255 aaKnown RBP15.03■□□□□ -0
ACSS3-208ENST00000616449 DDX21Q9NR30 783 aaKnown RBP eCLIP15.03■□□□□ -0
ACSS3-208ENST00000616449 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
ACSS3-208ENST00000616449 ALDH1L1O75891 902 aa15.03■□□□□ -0
ACSS3-208ENST00000616449 METTL24Q5JXM2 366 aa15.03■□□□□ -0
ACSS3-208ENST00000616449 HELBQ8NG08 1087 aaPredicted RBP15.03■□□□□ -0
ACSS3-208ENST00000616449 IQSEC3Q9UPP2 1182 aaPredicted RBP15.03■□□□□ -0
ACSS3-208ENST00000616449 PPLO60437 1756 aa15.03■□□□□ -0
ACSS3-208ENST00000616449 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
ACSS3-208ENST00000616449 NEURL4Q96JN8 1562 aa15.03■□□□□ -0
ACSS3-208ENST00000616449 ZNF165P49910 485 aa15.03■□□□□ -0
ACSS3-208ENST00000616449 TPCN1Q9ULQ1 816 aa15.03■□□□□ -0
ACSS3-208ENST00000616449 RRP9O43818 475 aaKnown RBP15.02■□□□□ -0
ACSS3-208ENST00000616449 TRIM29Q14134 588 aa15.02■□□□□ -0
ACSS3-208ENST00000616449 LSG1Q9H089 658 aaKnown RBP15.02■□□□□ -0
ACSS3-208ENST00000616449 CPSF1Q10570 1443 aaKnown RBP15.02□□□□□ -0.01
ACSS3-208ENST00000616449 COL3A1P02461 1466 aaPredicted RBP15.02□□□□□ -0.01
ACSS3-208ENST00000616449 CCDC186Q7Z3E2 898 aa15.02□□□□□ -0.01
ACSS3-208ENST00000616449 RASSF8Q8NHQ8 419 aa15.02□□□□□ -0.01
ACSS3-208ENST00000616449 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
ACSS3-208ENST00000616449 CBX1P83916 185 aa15.01□□□□□ -0.01
ACSS3-208ENST00000616449 CPLX2Q6PUV4 134 aaKnown RBP15.01□□□□□ -0.01
ACSS3-208ENST00000616449 ZNF589Q86UQ0 364 aaPredicted RBP15.01□□□□□ -0.01
ACSS3-208ENST00000616449 NUP133Q8WUM0 1156 aa15.01□□□□□ -0.01
ACSS3-208ENST00000616449 OSBPL3Q9H4L5 887 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms