RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CHMP4BP1P59074 171 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 PPARDQ03181 441 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 CCDC114Q96M63 670 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 ECM2O94769 699 aaPredicted RBP15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 ATP2B2Q01814 1243 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 CLASRPQ8N2M8 674 aaKnown RBP15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 MYO6Q9UM54 1294 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 COL17A1Q9UMD9 1497 aaPredicted RBP15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 A0A087WWV3 80 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 NDUFAB1O14561 156 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 PIK3C2GO75747 1445 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 C14orf37Q86TY3 774 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 MEIS3Q99687 375 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
PPP4R3B-205ENST00000616288 EFCAB8A8MWE9 144 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 LONRF2Q1L5Z9 754 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 CCDC158Q5M9N0 1113 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 FAM76AQ8TAV0 307 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 A0A087WUV0 522 aaPredicted RBP15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 GOLGA6L10A6NI86 522 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 SLFNL1Q499Z3 407 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 BICC1Q9H694 974 aaKnown RBP15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 CCDC196A0A1B0GTZ2 297 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 N4BP2L2Q92802 583 aaPredicted RBP15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 ORC3Q9UBD5 711 aaPredicted RBP15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
PPP4R3B-205ENST00000616288 CCDC144BQ3MJ40 725 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 FILIP1LQ4L180 1135 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 CCDC144CPQ8IYA2 1237 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 CLSTN2Q9H4D0 955 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 SLC52A1Q9NWF4 448 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 TADA2BQ86TJ2 420 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 RASSF8Q8NHQ8 419 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 CCDC141Q6ZP82 1450 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 AP5Z1O43299 807 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 PDE6BP35913 854 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 ANKRD44Q8N8A2 993 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 PPP1R13BQ96KQ4 1090 aa15.62■□□□□ 0.09
PPP4R3B-205ENST00000616288 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 SATB1Q01826 763 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 KIAA1328Q86T90 577 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 TTC6Q86TZ1 520 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 TSPYL6Q8N831 410 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 KIF4AO95239 1232 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 CEP112Q8N8E3 955 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 MINK1Q8N4C8 1332 aaPredicted RBP15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 NR1I2O75469 434 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 FAM204AQ9H8W3 233 aa15.61■□□□□ 0.09
PPP4R3B-205ENST00000616288 HSPA4P34932 840 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 CHMLP26374 656 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 ZNF569Q5MCW4 686 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 ODF2LQ9ULJ1 636 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 NPC1L1Q9UHC9 1359 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 POLR1AO95602 1720 aaPredicted RBP15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 KIF1CO43896 1103 aaKnown RBP15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 MATR3P43243 847 aaKnown RBP eCLIP15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 CCDC181Q5TID7 509 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 BCAS4Q8TDM0 211 aa15.6■□□□□ 0.09
PPP4R3B-205ENST00000616288 MUM1L1Q5H9M0 696 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 RSRC1Q96IZ7 334 aaKnown RBP15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 PARD6BQ9BYG5 372 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 XPO4Q9C0E2 1151 aaKnown RBP15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 ASXL1Q8IXJ9 1541 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 PRAG1Q86YV5 1406 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 KIF3BO15066 747 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 RPSAP08865 295 aaKnown RBP15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 KANK1Q14678 1352 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 NUP133Q8WUM0 1156 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 KIAA0586Q9BVV6 1533 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 CHRM1P11229 460 aaPredicted RBP15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 PLA2G4AP47712 749 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 KLHL10Q6JEL2 608 aa15.59■□□□□ 0.09
PPP4R3B-205ENST00000616288 NOP2P46087 812 aaKnown RBP15.58■□□□□ 0.09
PPP4R3B-205ENST00000616288 NEDD9Q14511 834 aa15.58■□□□□ 0.09
PPP4R3B-205ENST00000616288 ATP8B1O43520 1251 aa15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 MCM3P25205 808 aa15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 CARD14Q9BXL6 1004 aa15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 C9orf78Q9NZ63 289 aaPredicted RBP15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 ARID4AP29374 1257 aaPredicted RBP15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 CEP85LQ5SZL2 805 aa15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 CDC37L1Q7L3B6 337 aa15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 MRPL50Q8N5N7 158 aaKnown RBP15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 KIF1BPQ96EK5 621 aa15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
PPP4R3B-205ENST00000616288 GOLGA6CA6NDK9 693 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 GOLGA6DP0CG33 693 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 TTC19Q6DKK2 380 aaPredicted RBP15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 HYPKQ9NX55 129 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 GOLGA6AQ9NYA3 693 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
PPP4R3B-205ENST00000616288 TRIM29Q14134 588 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms