RNA–Protein interactions for RNA: ENST00000613706.4

BARD1-211, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-211ENST00000613706 CEP135Q66GS9 1140 aa12.81□□□□□ -0.36
BARD1-211ENST00000613706 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
BARD1-211ENST00000613706 LSG1Q9H089 658 aaKnown RBP12.81□□□□□ -0.36
BARD1-211ENST00000613706 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
BARD1-211ENST00000613706 FSIP1Q8NA03 581 aa12.81□□□□□ -0.36
BARD1-211ENST00000613706 CGNQ9P2M7 1197 aaKnown RBP12.81□□□□□ -0.36
BARD1-211ENST00000613706 STAP2Q9UGK3 403 aa12.81□□□□□ -0.36
BARD1-211ENST00000613706 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
BARD1-211ENST00000613706 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
BARD1-211ENST00000613706 HYPKQ9NX55 129 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 SKILP12757 684 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 KRT32Q14532 448 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 CCDC85AQ96PX6 553 aaPredicted RBP12.8□□□□□ -0.36
BARD1-211ENST00000613706 TPCN1Q9ULQ1 816 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 ATP10DQ9P241 1426 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 JAK2O60674 1132 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 ATP2B1P20020 1258 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 FKBP4Q02790 459 aaKnown RBP eCLIP12.8□□□□□ -0.36
BARD1-211ENST00000613706 Q6ZUG5 572 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 CHST3Q7LGC8 479 aa12.8□□□□□ -0.36
BARD1-211ENST00000613706 MROH2AA6NES4 1674 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 AATKQ6ZMQ8 1374 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
BARD1-211ENST00000613706 NRXN1Q9ULB1 1477 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 SLC27A2O14975 620 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 RALYLQ86SE5 291 aaKnown RBP12.79□□□□□ -0.36
BARD1-211ENST00000613706 TTC41PQ6P2S7 1318 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
BARD1-211ENST00000613706 HOXC9P31274 260 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
BARD1-211ENST00000613706 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
BARD1-211ENST00000613706 MAP3K5Q99683 1374 aa12.78□□□□□ -0.36
BARD1-211ENST00000613706 SERPINC1P01008 464 aa12.78□□□□□ -0.36
BARD1-211ENST00000613706 A0A087WWV3 80 aa12.78□□□□□ -0.36
BARD1-211ENST00000613706 ZC3H6P61129 1189 aaKnown RBP12.78□□□□□ -0.36
BARD1-211ENST00000613706 KIF18AQ8NI77 898 aa12.78□□□□□ -0.36
BARD1-211ENST00000613706 TRERF1Q96PN7 1200 aa12.78□□□□□ -0.36
BARD1-211ENST00000613706 TMX1Q9H3N1 280 aa12.78□□□□□ -0.36
BARD1-211ENST00000613706 GRM8O00222 908 aa12.77□□□□□ -0.36
BARD1-211ENST00000613706 BICC1Q9H694 974 aaKnown RBP12.77□□□□□ -0.36
BARD1-211ENST00000613706 ANO10Q9NW15 660 aa12.77□□□□□ -0.36
BARD1-211ENST00000613706 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.36
BARD1-211ENST00000613706 USP16Q9Y5T5 823 aa12.77□□□□□ -0.36
BARD1-211ENST00000613706 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.36
BARD1-211ENST00000613706 LEO1Q8WVC0 666 aaPredicted RBP12.77□□□□□ -0.36
BARD1-211ENST00000613706 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.37
BARD1-211ENST00000613706 GOLIM4O00461 696 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 NFXL1Q6ZNB6 911 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
BARD1-211ENST00000613706 AOX1Q06278 1338 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 NR1I2O75469 434 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 HAND2P61296 217 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 TMC6Q7Z403 805 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 AOPEPQ8N6M6 819 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.37
BARD1-211ENST00000613706 ATP7BP35670 1465 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 TRDNQ13061 729 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 STX1AQ16623 288 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 ZBTB9Q96C00 473 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 MLH3Q9UHC1 1453 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.37
BARD1-211ENST00000613706 ZNF75DP51815 510 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
BARD1-211ENST00000613706 CAMSAP1Q5T5Y3 1602 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 TNNT3P45378 269 aaPredicted RBP12.75□□□□□ -0.37
BARD1-211ENST00000613706 CCDC69A6NI79 296 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
BARD1-211ENST00000613706 RPS6KB1P23443 525 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 APOBRQ0VD83 1088 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 TRIM29Q14134 588 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 PTPRMP28827 1452 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 CPLX2Q6PUV4 134 aaKnown RBP12.75□□□□□ -0.37
BARD1-211ENST00000613706 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
BARD1-211ENST00000613706 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 ARGLU1Q9NWB6 273 aaPredicted RBP12.75□□□□□ -0.37
BARD1-211ENST00000613706 MRVI1Q9Y6F6 885 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
BARD1-211ENST00000613706 ADGRB2O60241 1585 aa12.75□□□□□ -0.37
BARD1-211ENST00000613706 INO80Q9ULG1 1556 aaPredicted RBP12.75□□□□□ -0.37
BARD1-211ENST00000613706 A0A087WZG4 1122 aa12.74□□□□□ -0.37
BARD1-211ENST00000613706 SMTNL1A8MU46 457 aa12.74□□□□□ -0.37
BARD1-211ENST00000613706 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
BARD1-211ENST00000613706 SUCLG2Q96I99 432 aa12.74□□□□□ -0.37
BARD1-211ENST00000613706 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
BARD1-211ENST00000613706 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
BARD1-211ENST00000613706 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
BARD1-211ENST00000613706 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
BARD1-211ENST00000613706 BEND3Q5T5X7 828 aa12.74□□□□□ -0.37
BARD1-211ENST00000613706 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms