RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 GNAI1P63096 354 aa8.18□□□□□ -1.1
CDKAL1-204ENST00000613575 NME9Q86XW9 330 aa8.18□□□□□ -1.1
CDKAL1-204ENST00000613575 BANK1Q8NDB2 785 aa8.18□□□□□ -1.1
CDKAL1-204ENST00000613575 COG3Q96JB2 828 aa8.18□□□□□ -1.1
CDKAL1-204ENST00000613575 CGNQ9P2M7 1197 aaKnown RBP8.18□□□□□ -1.1
CDKAL1-204ENST00000613575 TBX22Q9Y458 520 aa8.18□□□□□ -1.1
CDKAL1-204ENST00000613575 ANKRD26Q9UPS8 1709 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 KIF16BQ96L93 1317 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 PRR36Q9H6K5 1346 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 PLEKHG1Q9ULL1 1385 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 LTKP29376 864 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 PRR14Q9BWN1 585 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 EMILIN1Q9Y6C2 1016 aa8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 CDK12Q9NYV4 1490 aaPredicted RBP8.17□□□□□ -1.1
CDKAL1-204ENST00000613575 ZBTB7BO15156 539 aaPredicted RBP8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 FRAT2O75474 233 aaPredicted RBP8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 MRE11P49959 708 aa8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 DIXDC1Q155Q3 683 aa8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 SPIRE2Q8WWL2 714 aa8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 RAI14Q9P0K7 980 aa8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 PIK3R4Q99570 1358 aa8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 ROBO2Q9HCK4 1378 aa8.16□□□□□ -1.1
CDKAL1-204ENST00000613575 XRCC6P12956 609 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 APLP1P51693 650 aa8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 SATB1Q01826 763 aa8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 USP31Q70CQ4 1352 aa8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 SSH2Q76I76 1423 aa8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 TTC21BQ7Z4L5 1316 aa8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 TMEM57Q8N5G2 664 aa8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 SH3BP1Q9Y3L3 701 aa8.15□□□□□ -1.1
CDKAL1-204ENST00000613575 CPS1P31327 1500 aa8.15□□□□□ -1.11
CDKAL1-204ENST00000613575 FSD2A1L4K1 749 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 SSR1P43307 286 aaKnown RBP8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 FUT2Q10981 343 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 RBM28Q9NW13 759 aaKnown RBP8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 KIF24Q5T7B8 1368 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 ACTN4O43707 911 aaKnown RBP8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 HMOX1P09601 288 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 CASC1Q6TDU7 716 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 TBC1D32Q96NH3 1257 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 MBIPQ9NS73 344 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
CDKAL1-204ENST00000613575 ACEP12821 1306 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 KNDC1Q76NI1 1749 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 CHL1O00533 1208 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 USP46P62068 366 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 NUCB1Q02818 461 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 ITPRIPQ8IWB1 547 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 MYCBPQ99417 103 aaPredicted RBP8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 EID1Q9Y6B2 187 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 ARHGAP23Q9P227 1491 aa8.13□□□□□ -1.11
CDKAL1-204ENST00000613575 TTC21AQ8NDW8 1320 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 GOLIM4O00461 696 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 NDUFV2P19404 249 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 ATP6V1AP38606 617 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 KCNJ4P48050 445 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 RRS1Q15050 365 aaKnown RBP8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 MYSM1Q5VVJ2 828 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 CTR9Q6PD62 1173 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 TSPYL6Q8N831 410 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 PCDHB3Q9Y5E6 796 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 LRRC7Q96NW7 1537 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 PTCH1Q13635 1447 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 ABCC4O15439 1325 aa8.12□□□□□ -1.11
CDKAL1-204ENST00000613575 HOXA2O43364 376 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 SEMA3FQ13275 785 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 TWISTNBQ3B726 338 aaPredicted RBP8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 C8orf58Q8NAV2 365 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 GCC1Q96CN9 775 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 TIGD1Q96MW7 591 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 API5Q9BZZ5 524 aaKnown RBP8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 BSDC1Q9NW68 430 aaPredicted RBP8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 AMOTL2Q9Y2J4 779 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 CEP83Q9Y592 693 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 OVOS2A0A0J9YW53 1432 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 OVOS2Q6IE36 1432 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 PTPRUQ92729 1446 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 KIF20BQ96Q89 1820 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 SLIT1O75093 1534 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 UQCRHLA0A096LP55 91 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 MOXD2PA6NHM9 499 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 UQCRHP07919 91 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 BECN1Q14457 450 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 CSPP1Q1MSJ5 1256 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 SH3D19Q5HYK7 790 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 THUMPD2Q9BTF0 503 aaKnown RBP8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 UPF2Q9HAU5 1272 aaKnown RBP8.11□□□□□ -1.11
CDKAL1-204ENST00000613575 USP6P35125 1406 aa8.1□□□□□ -1.11
CDKAL1-204ENST00000613575 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms