RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GOLGA6AQ9NYA3 693 aa10.02□□□□□ -0.81
TTC28-208ENST00000612946 KIAA1107Q9UPP5 1409 aa10.02□□□□□ -0.81
TTC28-208ENST00000612946 EFCAB2Q5VUJ9 269 aa10.02□□□□□ -0.81
TTC28-208ENST00000612946 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
TTC28-208ENST00000612946 TANGO6Q9C0B7 1094 aa10.02□□□□□ -0.81
TTC28-208ENST00000612946 DDX27Q96GQ7 796 aaKnown RBP10.02□□□□□ -0.81
TTC28-208ENST00000612946 JAKMIP1Q96N16 626 aaKnown RBP10.02□□□□□ -0.81
TTC28-208ENST00000612946 PLCB1Q9NQ66 1216 aa10.02□□□□□ -0.81
TTC28-208ENST00000612946 DNAI1Q9UI46 699 aa10.02□□□□□ -0.81
TTC28-208ENST00000612946 ERCC6LQ2NKX8 1250 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 TTC5Q8N0Z6 440 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 Q9H521 79 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 CETN1Q12798 172 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.01□□□□□ -0.819e-7■■■■□ 22.5
TTC28-208ENST00000612946 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
TTC28-208ENST00000612946 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
TTC28-208ENST00000612946 INSRP06213 1382 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 HDAC9Q9UKV0 1011 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
TTC28-208ENST00000612946 CEP85LQ5SZL2 805 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 A0A1W2PRG0 241 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 TNNC1P63316 161 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 DDX23Q9BUQ8 820 aaKnown RBP10.01□□□□□ -0.81
TTC28-208ENST00000612946 NPHP3Q7Z494 1330 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 G3V3G9 751 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 PSMD7P51665 324 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 DCAF8Q5TAQ9 597 aa10.01□□□□□ -0.81
TTC28-208ENST00000612946 TRMT1Q9NXH9 659 aaKnown RBP10.01□□□□□ -0.81
TTC28-208ENST00000612946 EVI5O60447 810 aa10□□□□□ -0.81
TTC28-208ENST00000612946 IQCGQ9H095 443 aaKnown RBP10□□□□□ -0.81
TTC28-208ENST00000612946 AKAP2Q9Y2D5 859 aa10□□□□□ -0.81
TTC28-208ENST00000612946 HDAC1Q13547 482 aaPredicted RBP10□□□□□ -0.81
TTC28-208ENST00000612946 MTMR3Q13615 1198 aa10□□□□□ -0.81
TTC28-208ENST00000612946 KIAA0753Q2KHM9 967 aa10□□□□□ -0.81
TTC28-208ENST00000612946 ITSN2Q9NZM3 1697 aa10□□□□□ -0.81
TTC28-208ENST00000612946 CCDC69A6NI79 296 aa10□□□□□ -0.81
TTC28-208ENST00000612946 MTRF1LQ9UGC7 380 aaKnown RBP10□□□□□ -0.81
TTC28-208ENST00000612946 ANKRD36BQ8N2N9 1353 aa10□□□□□ -0.81
TTC28-208ENST00000612946 PHLDB3Q6NSJ2 640 aa10□□□□□ -0.81
TTC28-208ENST00000612946 GAS2L2Q8NHY3 880 aa10□□□□□ -0.81
TTC28-208ENST00000612946 FERMT1Q9BQL6 677 aa10□□□□□ -0.81
TTC28-208ENST00000612946 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
TTC28-208ENST00000612946 PPP1R1BQ9UD71 204 aaPredicted RBP10□□□□□ -0.81
TTC28-208ENST00000612946 NOB1Q9ULX3 412 aaKnown RBP10□□□□□ -0.81
TTC28-208ENST00000612946 MACROD2A1Z1Q3 448 aa10□□□□□ -0.81
TTC28-208ENST00000612946 UBE4AQ14139 1066 aa10□□□□□ -0.81
TTC28-208ENST00000612946 SNCBQ16143 134 aa10□□□□□ -0.81
TTC28-208ENST00000612946 INTS8Q75QN2 995 aaKnown RBP10□□□□□ -0.81
TTC28-208ENST00000612946 RNF10Q8N5U6 811 aaKnown RBP10□□□□□ -0.81
TTC28-208ENST00000612946 PPFIA2O75334 1257 aa10□□□□□ -0.81
TTC28-208ENST00000612946 PPP2R3AQ06190 1150 aa10□□□□□ -0.81
TTC28-208ENST00000612946 CHMP4BP1P59074 171 aa10□□□□□ -0.81
TTC28-208ENST00000612946 APBA1Q02410 837 aa10□□□□□ -0.81
TTC28-208ENST00000612946 SLFN5Q08AF3 891 aa10□□□□□ -0.81
TTC28-208ENST00000612946 TEX2Q8IWB9 1127 aa10□□□□□ -0.81
TTC28-208ENST00000612946 NCOA2Q15596 1464 aa10□□□□□ -0.81
TTC28-208ENST00000612946 HCLS1P14317 486 aaPredicted RBP10□□□□□ -0.81
TTC28-208ENST00000612946 SYT1P21579 422 aa10□□□□□ -0.81
TTC28-208ENST00000612946 CAMK4Q16566 473 aa10□□□□□ -0.81
TTC28-208ENST00000612946 TCP11L2Q8N4U5 519 aa10□□□□□ -0.81
TTC28-208ENST00000612946 SOX12O15370 315 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 GLRX3O76003 335 aaKnown RBP9.99□□□□□ -0.81
TTC28-208ENST00000612946 SEPT2Q15019 361 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 FYB2Q5VWT5 728 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 SATB2Q9UPW6 733 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 PTPN23Q9H3S7 1636 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 ZSCAN22P10073 491 aaPredicted RBP9.99□□□□□ -0.81
TTC28-208ENST00000612946 VPS37DQ86XT2 251 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 MTUS1Q9ULD2 1270 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 CEBPZQ03701 1054 aaKnown RBP9.99□□□□□ -0.81
TTC28-208ENST00000612946 ICE2Q659A1 982 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 TAOK1Q7L7X3 1001 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 FAM71BQ8TC56 605 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 NSD2O96028 1365 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 TSNARE1Q96NA8 513 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 TSPYL4Q9UJ04 414 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 KDM4AO75164 1064 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 CABS1Q96KC9 395 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 SURF6O75683 361 aaKnown RBP9.99□□□□□ -0.81
TTC28-208ENST00000612946 AMPD3Q01432 767 aa9.99□□□□□ -0.81
TTC28-208ENST00000612946 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
TTC28-208ENST00000612946 FSIP1Q8NA03 581 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
TTC28-208ENST00000612946 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 MIER3Q7Z3K6 550 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 TBC1D31Q96DN5 1066 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 NKIRAS1Q9NYS0 192 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 UBASH3AP57075 661 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 TYRO3Q06418 890 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 PDCD2Q16342 344 aaPredicted RBP9.98□□□□□ -0.81
TTC28-208ENST00000612946 EID1Q9Y6B2 187 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 PPP2R5EQ16537 467 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 LRRC23Q53EV4 343 aaPredicted RBP9.98□□□□□ -0.81
TTC28-208ENST00000612946 GNL3LQ9NVN8 582 aaKnown RBP9.98□□□□□ -0.81
TTC28-208ENST00000612946 LRRD1A4D1F6 860 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 CNGA1P29973 690 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 ZBTB16Q05516 673 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 PPP1R14CQ8TAE6 165 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms