RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CTCFP49711 727 aaPredicted RBP31.2■■■□□ 2.59
MMP28-203ENST00000612672 C3orf67Q6ZVT6 689 aa31.2■■■□□ 2.59
MMP28-203ENST00000612672 MAP3K15Q6ZN16 1313 aa31.2■■■□□ 2.58
MMP28-203ENST00000612672 GPTP24298 496 aa31.19■■■□□ 2.58
MMP28-203ENST00000612672 LBX1P52954 281 aa31.18■■■□□ 2.58
MMP28-203ENST00000612672 PNMA8AQ86V59 439 aaPredicted RBP31.18■■■□□ 2.58
MMP28-203ENST00000612672 THUMPD2Q9BTF0 503 aaKnown RBP31.18■■■□□ 2.58
MMP28-203ENST00000612672 TRPM7Q96QT4 1865 aa31.18■■■□□ 2.58
MMP28-203ENST00000612672 ERVV-1B6SEH8 477 aa31.17■■■□□ 2.58
MMP28-203ENST00000612672 SCNN1DP51172 638 aa31.17■■■□□ 2.58
MMP28-203ENST00000612672 EIF4A1P60842 406 aaKnown RBP31.17■■■□□ 2.58
MMP28-203ENST00000612672 AIDAQ96BJ3 306 aa31.17■■■□□ 2.58
MMP28-203ENST00000612672 RRP7AQ9Y3A4 280 aaKnown RBP31.17■■■□□ 2.58
MMP28-203ENST00000612672 GJA3Q9Y6H8 435 aa31.17■■■□□ 2.58
MMP28-203ENST00000612672 LAMB2P55268 1798 aa31.16■■■□□ 2.58
MMP28-203ENST00000612672 HOXA10P31260 410 aaPredicted RBP31.16■■■□□ 2.58
MMP28-203ENST00000612672 SUSD4Q5VX71 490 aa31.16■■■□□ 2.58
MMP28-203ENST00000612672 NYXQ9GZU5 481 aa31.16■■■□□ 2.58
MMP28-203ENST00000612672 ZBTB3Q9H5J0 574 aa31.16■■■□□ 2.58
MMP28-203ENST00000612672 IBTKQ9P2D0 1353 aaPredicted RBP31.16■■■□□ 2.58
MMP28-203ENST00000612672 HSPA8P11142 646 aaKnown RBP31.15■■■□□ 2.58
MMP28-203ENST00000612672 MYL6BP14649 208 aa31.15■■■□□ 2.58
MMP28-203ENST00000612672 DEFB115Q30KQ5 88 aa31.15■■■□□ 2.58
MMP28-203ENST00000612672 NTSR2O95665 410 aa31.14■■■□□ 2.58
MMP28-203ENST00000612672 EPS15P42566 896 aa31.14■■■□□ 2.58
MMP28-203ENST00000612672 JDP2Q8WYK2 163 aa31.14■■■□□ 2.58
MMP28-203ENST00000612672 WDR33Q9C0J8 1336 aaKnown RBP31.14■■■□□ 2.58
MMP28-203ENST00000612672 DDX21Q9NR30 783 aaKnown RBP eCLIP31.13■■■□□ 2.57
MMP28-203ENST00000612672 TCERG1O14776 1098 aaKnown RBP31.12■■■□□ 2.57
MMP28-203ENST00000612672 ZNF34Q8IZ26 560 aa31.12■■■□□ 2.57
MMP28-203ENST00000612672 RPGRQ92834 1020 aaKnown RBP31.12■■■□□ 2.57
MMP28-203ENST00000612672 PLEKHF1Q96S99 279 aa31.12■■■□□ 2.57
MMP28-203ENST00000612672 EIF6P56537 245 aaKnown RBP31.11■■■□□ 2.57
MMP28-203ENST00000612672 KIF6Q6ZMV9 814 aa31.11■■■□□ 2.57
MMP28-203ENST00000612672 ABT1Q9ULW3 272 aaKnown RBP31.11■■■□□ 2.57
MMP28-203ENST00000612672 PPEF1O14829 653 aaPredicted RBP31.1■■■□□ 2.57
MMP28-203ENST00000612672 CC2D2BQ6DHV5 1058 aa31.1■■■□□ 2.57
MMP28-203ENST00000612672 ANKRD36CQ5JPF3 1778 aa31.1■■■□□ 2.57
MMP28-203ENST00000612672 LRP10Q7Z4F1 713 aa31.09■■■□□ 2.57
MMP28-203ENST00000612672 LARGE2Q8N3Y3 721 aa31.09■■■□□ 2.57
MMP28-203ENST00000612672 TRAF5O00463 557 aa31.08■■■□□ 2.57
MMP28-203ENST00000612672 CRAMP1Q96RY5 1269 aa31.08■■■□□ 2.57
MMP28-203ENST00000612672 PNISRQ8TF01 805 aaKnown RBP31.07■■■□□ 2.56
MMP28-203ENST00000612672 TAF1P21675 1872 aa31.07■■■□□ 2.56
MMP28-203ENST00000612672 NFE2L2Q16236 605 aa31.06■■■□□ 2.56
MMP28-203ENST00000612672 CST9Q5W186 159 aa31.06■■■□□ 2.56
MMP28-203ENST00000612672 LMOD1P29536 600 aaPredicted RBP31.05■■■□□ 2.56
MMP28-203ENST00000612672 GIGYF2Q6Y7W6 1299 aaKnown RBP31.05■■■□□ 2.56
MMP28-203ENST00000612672 RBM17Q96I25 401 aaKnown RBP31.05■■■□□ 2.56
MMP28-203ENST00000612672 AOC3Q16853 763 aa31.04■■■□□ 2.56
MMP28-203ENST00000612672 PDIA6Q15084 440 aa31.03■■■□□ 2.56
MMP28-203ENST00000612672 PROSER3Q2NL68 480 aa31.03■■■□□ 2.56
MMP28-203ENST00000612672 CYP4F22Q6NT55 531 aa31.03■■■□□ 2.56
MMP28-203ENST00000612672 CAPNS2Q96L46 248 aa31.03■■■□□ 2.56
MMP28-203ENST00000612672 PPIP5K2O43314 1243 aa31.02■■■□□ 2.56
MMP28-203ENST00000612672 ANXA1P04083 346 aa31.02■■■□□ 2.56
MMP28-203ENST00000612672 ABCC4O15439 1325 aa31.01■■■□□ 2.56
MMP28-203ENST00000612672 MAP2K1Q02750 393 aaPredicted RBP31.01■■■□□ 2.55
MMP28-203ENST00000612672 NIM1KQ8IY84 436 aa31.01■■■□□ 2.55
MMP28-203ENST00000612672 ABHD8Q96I13 439 aa31.01■■■□□ 2.55
MMP28-203ENST00000612672 USP50Q70EL3 339 aaPredicted RBP31■■■□□ 2.55
MMP28-203ENST00000612672 DUOX1Q9NRD9 1551 aa31■■■□□ 2.55
MMP28-203ENST00000612672 GRM1Q13255 1194 aa30.99■■■□□ 2.55
MMP28-203ENST00000612672 ATP6V0A2Q9Y487 856 aa30.99■■■□□ 2.55
MMP28-203ENST00000612672 ERBB4Q15303 1308 aa30.98■■■□□ 2.55
MMP28-203ENST00000612672 GRIPAP1Q4V328 841 aa30.98■■■□□ 2.55
MMP28-203ENST00000612672 PAXIP1Q6ZW49 1069 aaPredicted RBP30.98■■■□□ 2.55
MMP28-203ENST00000612672 GPRC5DQ9NZD1 345 aa30.98■■■□□ 2.55
MMP28-203ENST00000612672 CXCL9Q07325 125 aa30.97■■■□□ 2.55
MMP28-203ENST00000612672 TLL2Q9Y6L7 1015 aa30.97■■■□□ 2.55
MMP28-203ENST00000612672 AOC2O75106 756 aa30.96■■■□□ 2.55
MMP28-203ENST00000612672 SLC10A5Q5PT55 438 aa30.96■■■□□ 2.55
MMP28-203ENST00000612672 PPP1R42Q7Z4L9 355 aa30.96■■■□□ 2.55
MMP28-203ENST00000612672 TSKSQ9UJT2 592 aa30.96■■■□□ 2.55
MMP28-203ENST00000612672 COL4A1P02462 1669 aa30.96■■■□□ 2.55
MMP28-203ENST00000612672 LRRC37AA6NMS7 1700 aa30.95■■■□□ 2.55
MMP28-203ENST00000612672 PARP10Q53GL7 1025 aa30.95■■■□□ 2.55
MMP28-203ENST00000612672 NLRP3Q96P20 1036 aa30.95■■■□□ 2.55
MMP28-203ENST00000612672 GPR101Q96P66 508 aaPredicted RBP30.95■■■□□ 2.55
MMP28-203ENST00000612672 RTFDC1Q9BY42 306 aaPredicted RBP30.95■■■□□ 2.55
MMP28-203ENST00000612672 ADARB2Q9NS39 739 aaKnown RBP30.95■■■□□ 2.55
MMP28-203ENST00000612672 DDX60Q8IY21 1712 aaKnown RBP30.95■■■□□ 2.54
MMP28-203ENST00000612672 EIF2S2P20042 333 aaKnown RBP30.94■■■□□ 2.54
MMP28-203ENST00000612672 GMPSP49915 693 aaPredicted RBP30.94■■■□□ 2.54
MMP28-203ENST00000612672 UTP14AQ9BVJ6 771 aaKnown RBP30.94■■■□□ 2.54
MMP28-203ENST00000612672 TSPYL4Q9UJ04 414 aa30.94■■■□□ 2.54
MMP28-203ENST00000612672 NEFMP07197 916 aa30.93■■■□□ 2.54
MMP28-203ENST00000612672 GLIS2Q9BZE0 524 aaPredicted RBP30.93■■■□□ 2.54
MMP28-203ENST00000612672 SHTN1A0MZ66 631 aa30.92■■■□□ 2.54
MMP28-203ENST00000612672 HCLS1P14317 486 aaPredicted RBP30.92■■■□□ 2.54
MMP28-203ENST00000612672 ZNRF3Q9ULT6 936 aa30.92■■■□□ 2.54
MMP28-203ENST00000612672 ECE1P42892 770 aa30.91■■■□□ 2.54
MMP28-203ENST00000612672 HIRAP54198 1017 aaPredicted RBP30.91■■■□□ 2.54
MMP28-203ENST00000612672 FAM161AQ3B820 660 aa30.9■■■□□ 2.54
MMP28-203ENST00000612672 TRPM4Q8TD43 1214 aa30.9■■■□□ 2.54
MMP28-203ENST00000612672 ZNF428Q96B54 188 aa30.9■■■□□ 2.54
MMP28-203ENST00000612672 CASP8AP2Q9UKL3 1982 aa30.9■■■□□ 2.54
MMP28-203ENST00000612672 SAPCD2Q86UD0 394 aa30.89■■■□□ 2.54
MMP28-203ENST00000612672 NLRP10Q86W26 655 aa30.89■■■□□ 2.54
MMP28-203ENST00000612672 NECTIN2Q92692 538 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms