RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SENP3-EIF4A1A0A087X0R7 540 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 C21orf2O43822 256 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 HSP90B1P14625 803 aaKnown RBP15.85■□□□□ 0.13
CBWD3-208ENST00000612050 LMNB1P20700 586 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 TWISTNBQ3B726 338 aaPredicted RBP15.85■□□□□ 0.13
CBWD3-208ENST00000612050 ERFEQ4G0M1 354 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 SUSD4Q5VX71 490 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 PRPF40BQ6NWY9 871 aaKnown RBP15.85■□□□□ 0.13
CBWD3-208ENST00000612050 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 TSR2Q969E8 191 aaKnown RBP15.85■□□□□ 0.13
CBWD3-208ENST00000612050 UBN2Q6ZU65 1347 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 C8orf58Q8NAV2 365 aa15.85■□□□□ 0.13
CBWD3-208ENST00000612050 RBM17Q96I25 401 aaKnown RBP15.85■□□□□ 0.13
CBWD3-208ENST00000612050 TRMT112Q9UI30 125 aaKnown RBP15.85■□□□□ 0.13
CBWD3-208ENST00000612050 RIC1Q4ADV7 1423 aa15.84■□□□□ 0.13
CBWD3-208ENST00000612050 KDM2BQ8NHM5 1336 aa15.84■□□□□ 0.13
CBWD3-208ENST00000612050 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
CBWD3-208ENST00000612050 ADCY9O60503 1353 aa15.84■□□□□ 0.13
CBWD3-208ENST00000612050 NTSR2O95665 410 aa15.84■□□□□ 0.13
CBWD3-208ENST00000612050 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
CBWD3-208ENST00000612050 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.13
CBWD3-208ENST00000612050 KLRG2A4D1S0 409 aaPredicted RBP15.83■□□□□ 0.12
CBWD3-208ENST00000612050 CCER2I3L3R5 266 aa15.83■□□□□ 0.12
CBWD3-208ENST00000612050 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
CBWD3-208ENST00000612050 GOLGB1Q14789 3259 aaKnown RBP15.82■□□□□ 0.12
CBWD3-208ENST00000612050 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
CBWD3-208ENST00000612050 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
CBWD3-208ENST00000612050 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
CBWD3-208ENST00000612050 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
CBWD3-208ENST00000612050 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
CBWD3-208ENST00000612050 RASSF7Q02833 373 aa15.81■□□□□ 0.12
CBWD3-208ENST00000612050 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
CBWD3-208ENST00000612050 C16orf71Q8IYS4 520 aaPredicted RBP15.81■□□□□ 0.12
CBWD3-208ENST00000612050 UTRNP46939 3433 aa15.81■□□□□ 0.12
CBWD3-208ENST00000612050 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
CBWD3-208ENST00000612050 SBF1O95248 1867 aa15.81■□□□□ 0.12
CBWD3-208ENST00000612050 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
CBWD3-208ENST00000612050 CRY2Q49AN0 593 aa15.8■□□□□ 0.12
CBWD3-208ENST00000612050 DPY19L2Q6NUT2 758 aa15.8■□□□□ 0.12
CBWD3-208ENST00000612050 LTBP3Q9NS15 1303 aa15.8■□□□□ 0.12
CBWD3-208ENST00000612050 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
CBWD3-208ENST00000612050 DDX46Q7L014 1031 aaKnown RBP15.79■□□□□ 0.12
CBWD3-208ENST00000612050 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
CBWD3-208ENST00000612050 CRAMP1Q96RY5 1269 aa15.79■□□□□ 0.12
CBWD3-208ENST00000612050 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
CBWD3-208ENST00000612050 FER1L6Q2WGJ9 1857 aa15.79■□□□□ 0.12
CBWD3-208ENST00000612050 CCDC88AQ3V6T2 1871 aa15.79■□□□□ 0.12
CBWD3-208ENST00000612050 TNRC6CQ9HCJ0 1690 aaKnown RBP15.79■□□□□ 0.12
CBWD3-208ENST00000612050 CACNA1FO60840 1977 aa15.79■□□□□ 0.12
CBWD3-208ENST00000612050 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
CBWD3-208ENST00000612050 NFKBIEO00221 500 aa15.77■□□□□ 0.12
CBWD3-208ENST00000612050 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
CBWD3-208ENST00000612050 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
CBWD3-208ENST00000612050 TRIM28Q13263 835 aaKnown RBP15.77■□□□□ 0.12
CBWD3-208ENST00000612050 CCDC191Q8NCU4 936 aa15.77■□□□□ 0.12
CBWD3-208ENST00000612050 MYD88Q99836 296 aa15.77■□□□□ 0.12
CBWD3-208ENST00000612050 ISCA1Q9BUE6 129 aa15.77■□□□□ 0.12
CBWD3-208ENST00000612050 TIAM2Q8IVF5 1701 aa15.77■□□□□ 0.11
CBWD3-208ENST00000612050 PPEF1O14829 653 aaPredicted RBP15.77■□□□□ 0.11
CBWD3-208ENST00000612050 C1QTNF8P60827 252 aa15.77■□□□□ 0.11
CBWD3-208ENST00000612050 FKBP4Q02790 459 aaKnown RBP eCLIP15.77■□□□□ 0.11
CBWD3-208ENST00000612050 EXOSC9Q06265 439 aaKnown RBP15.77■□□□□ 0.11
CBWD3-208ENST00000612050 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.11
CBWD3-208ENST00000612050 KSR2Q6VAB6 950 aa15.77■□□□□ 0.11
CBWD3-208ENST00000612050 CWC25Q9NXE8 425 aaPredicted RBP15.77■□□□□ 0.11
CBWD3-208ENST00000612050 HCLS1P14317 486 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-208ENST00000612050 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-208ENST00000612050 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-208ENST00000612050 MAP3K2Q9Y2U5 619 aa15.76■□□□□ 0.11
CBWD3-208ENST00000612050 DICER1Q9UPY3 1922 aaKnown RBP15.75■□□□□ 0.11
CBWD3-208ENST00000612050 E9PSI1 815 aa15.75■□□□□ 0.11
CBWD3-208ENST00000612050 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
CBWD3-208ENST00000612050 BBOX1O75936 387 aa15.75■□□□□ 0.11
CBWD3-208ENST00000612050 TMC4Q7Z404 712 aa15.75■□□□□ 0.11
CBWD3-208ENST00000612050 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
CBWD3-208ENST00000612050 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
CBWD3-208ENST00000612050 PI4KAP2A4QPH2 592 aa15.74■□□□□ 0.11
CBWD3-208ENST00000612050 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
CBWD3-208ENST00000612050 PI4KAP1Q8N8J0 262 aa15.74■□□□□ 0.11
CBWD3-208ENST00000612050 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
CBWD3-208ENST00000612050 JDP2Q8WYK2 163 aa15.74■□□□□ 0.11
CBWD3-208ENST00000612050 GLTPD2A6NH11 291 aa15.73■□□□□ 0.11
CBWD3-208ENST00000612050 VAMP4O75379 141 aa15.73■□□□□ 0.11
CBWD3-208ENST00000612050 FLIIQ13045 1269 aa15.73■□□□□ 0.11
CBWD3-208ENST00000612050 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
CBWD3-208ENST00000612050 C7orf43Q8WVR3 580 aa15.73■□□□□ 0.11
CBWD3-208ENST00000612050 LAMB2P55268 1798 aa15.73■□□□□ 0.11
CBWD3-208ENST00000612050 ABCC4O15439 1325 aa15.72■□□□□ 0.11
CBWD3-208ENST00000612050 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-208ENST00000612050 GRAPQ13588 217 aa15.72■□□□□ 0.11
CBWD3-208ENST00000612050 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-208ENST00000612050 PSMD1Q99460 953 aa15.72■□□□□ 0.11
CBWD3-208ENST00000612050 TOMM70O94826 608 aa15.71■□□□□ 0.11
CBWD3-208ENST00000612050 IARSP41252 1262 aaKnown RBP15.71■□□□□ 0.11
CBWD3-208ENST00000612050 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
CBWD3-208ENST00000612050 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
CBWD3-208ENST00000612050 ZNF428Q96B54 188 aa15.71■□□□□ 0.11
CBWD3-208ENST00000612050 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
CBWD3-208ENST00000612050 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.1
CBWD3-208ENST00000612050 PDE8AO60658 829 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms