RNA–Protein interactions for RNA: ENST00000611928.2

CLUHP11-201, Transcript of clustered mitochondria homolog pseudogene 11, humanhuman

BASIC

Gene CLUHP11, Length 1,026 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP11-201ENST00000611928 MRS2Q9HD23 443 aa14□□□□□ -0.17
CLUHP11-201ENST00000611928 ZNF277Q9NRM2 450 aaPredicted RBP14□□□□□ -0.17
CLUHP11-201ENST00000611928 CEP350Q5VT06 3117 aa14□□□□□ -0.17
CLUHP11-201ENST00000611928 LAMB2P55268 1798 aa13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 LTBP3Q9NS15 1303 aa13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 GNAI1P63096 354 aa13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 CALD1Q05682 793 aaKnown RBP13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 IFT57Q9NWB7 429 aa13.99□□□□□ -0.17
CLUHP11-201ENST00000611928 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLUHP11-201ENST00000611928 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
CLUHP11-201ENST00000611928 RBM46Q8TBY0 533 aaKnown RBP13.98□□□□□ -0.17
CLUHP11-201ENST00000611928 C7orf43Q8WVR3 580 aa13.98□□□□□ -0.17
CLUHP11-201ENST00000611928 RBM17Q96I25 401 aaKnown RBP13.98□□□□□ -0.17
CLUHP11-201ENST00000611928 HOXB7P09629 217 aa13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 HCLS1P14317 486 aaPredicted RBP13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 CRY2Q49AN0 593 aa13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 SLC51AQ86UW1 340 aa13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 NLRP10Q86W26 655 aa13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 NLRP3Q96P20 1036 aa13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 DBF4Q9UBU7 674 aaPredicted RBP13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 TRMT112Q9UI30 125 aaKnown RBP13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 SALL2Q9Y467 1007 aaPredicted RBP13.97□□□□□ -0.17
CLUHP11-201ENST00000611928 TAF1P21675 1872 aa13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 ATP5J2-PTCD1G3V325 749 aa13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 PPEF1O14829 653 aaPredicted RBP13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 DDNO94850 711 aaPredicted RBP13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 ZNF853P0CG23 659 aa13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 VEGFAP15692 232 aaPredicted RBP13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 TCIRG1Q13488 830 aa13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 RTKN2Q8IZC4 609 aa13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 SYNE4Q8N205 404 aa13.96□□□□□ -0.17
CLUHP11-201ENST00000611928 RIC1Q4ADV7 1423 aa13.96□□□□□ -0.18
CLUHP11-201ENST00000611928 WDR90Q96KV7 1748 aa13.95□□□□□ -0.18
CLUHP11-201ENST00000611928 APLP1P51693 650 aa13.95□□□□□ -0.18
CLUHP11-201ENST00000611928 RTL5Q5HYW3 569 aaPredicted RBP13.95□□□□□ -0.18
CLUHP11-201ENST00000611928 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
CLUHP11-201ENST00000611928 PLBD2Q8NHP8 589 aa13.95□□□□□ -0.18
CLUHP11-201ENST00000611928 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
CLUHP11-201ENST00000611928 HYPKQ9NX55 129 aa13.95□□□□□ -0.18
CLUHP11-201ENST00000611928 IARSP41252 1262 aaKnown RBP13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 HTRA3P83110 453 aa13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 GOLGA2Q08379 1002 aa13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 RIC3Q7Z5B4 369 aa13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 TMX4Q9H1E5 349 aaPredicted RBP13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 PHAXQ9H814 394 aaKnown RBP13.94□□□□□ -0.18
CLUHP11-201ENST00000611928 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
CLUHP11-201ENST00000611928 ZNF541Q9H0D2 1346 aa13.93□□□□□ -0.18
CLUHP11-201ENST00000611928 DDX60Q8IY21 1712 aaKnown RBP13.93□□□□□ -0.18
CLUHP11-201ENST00000611928 FSTL1Q12841 308 aa13.93□□□□□ -0.18
CLUHP11-201ENST00000611928 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
CLUHP11-201ENST00000611928 ABCC4O15439 1325 aa13.92□□□□□ -0.18
CLUHP11-201ENST00000611928 RNF123Q5XPI4 1314 aa13.92□□□□□ -0.18
CLUHP11-201ENST00000611928 HOXA10P31260 410 aaPredicted RBP13.92□□□□□ -0.18
CLUHP11-201ENST00000611928 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
CLUHP11-201ENST00000611928 TSPYL6Q8N831 410 aa13.92□□□□□ -0.18
CLUHP11-201ENST00000611928 FAM89AQ96GI7 184 aa13.92□□□□□ -0.18
CLUHP11-201ENST00000611928 POTECB2RU33 542 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 CCDC30Q5VVM6 783 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 WWC1Q8IX03 1113 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 LARGE2Q8N3Y3 721 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 JDP2Q8WYK2 163 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 MYD88Q99836 296 aa13.91□□□□□ -0.18
CLUHP11-201ENST00000611928 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
CLUHP11-201ENST00000611928 PSMD1Q99460 953 aa13.9□□□□□ -0.18
CLUHP11-201ENST00000611928 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
CLUHP11-201ENST00000611928 GJA3Q9Y6H8 435 aa13.9□□□□□ -0.18
CLUHP11-201ENST00000611928 SCN4AP35499 1836 aa13.9□□□□□ -0.18
CLUHP11-201ENST00000611928 SNED1Q8TER0 1413 aa13.9□□□□□ -0.19
CLUHP11-201ENST00000611928 COL4A5P29400 1685 aa13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 PPIP5K2O43314 1243 aa13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 EIF6P56537 245 aaKnown RBP13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 AOC3Q16853 763 aa13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 STK31Q9BXU1 1019 aa13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 ATP6V0A2Q9Y487 856 aa13.89□□□□□ -0.19
CLUHP11-201ENST00000611928 IQCA1LA6NCM1 817 aa13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 DDX58O95786 925 aaKnown RBP13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 GRAPQ13588 217 aa13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 DPP8Q6V1X1 898 aaPredicted RBP13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 NIM1KQ8IY84 436 aa13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 JARID2Q92833 1246 aaPredicted RBP13.88□□□□□ -0.19
CLUHP11-201ENST00000611928 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
CLUHP11-201ENST00000611928 TWISTNBQ3B726 338 aaPredicted RBP13.87□□□□□ -0.19
CLUHP11-201ENST00000611928 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
CLUHP11-201ENST00000611928 FZD9O00144 591 aa13.86□□□□□ -0.19
CLUHP11-201ENST00000611928 BBOX1O75936 387 aa13.86□□□□□ -0.19
CLUHP11-201ENST00000611928 GRIPAP1Q4V328 841 aa13.86□□□□□ -0.19
CLUHP11-201ENST00000611928 MPNDQ8N594 471 aa13.86□□□□□ -0.19
CLUHP11-201ENST00000611928 CCDC85AQ96PX6 553 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms