RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 BBOX1O75936 387 aa10.78□□□□□ -0.68
ZNF248-208ENST00000611278 MRS2Q9HD23 443 aa10.78□□□□□ -0.68
ZNF248-208ENST00000611278 DBF4Q9UBU7 674 aaPredicted RBP10.78□□□□□ -0.68
ZNF248-208ENST00000611278 NPC1L1Q9UHC9 1359 aa10.78□□□□□ -0.68
ZNF248-208ENST00000611278 HEG1Q9ULI3 1381 aa10.78□□□□□ -0.68
ZNF248-208ENST00000611278 GLTPD2A6NH11 291 aa10.77□□□□□ -0.68
ZNF248-208ENST00000611278 CHRNA5P30532 468 aa10.77□□□□□ -0.68
ZNF248-208ENST00000611278 C2orf69Q8N8R5 385 aa10.77□□□□□ -0.68
ZNF248-208ENST00000611278 KDM6AO15550 1401 aaPredicted RBP10.77□□□□□ -0.69
ZNF248-208ENST00000611278 MAP2K1Q02750 393 aaPredicted RBP10.77□□□□□ -0.69
ZNF248-208ENST00000611278 OTUD7BQ6GQQ9 843 aa10.77□□□□□ -0.69
ZNF248-208ENST00000611278 ERVV-1B6SEH8 477 aa10.77□□□□□ -0.69
ZNF248-208ENST00000611278 CYP19A1P11511 503 aaPredicted RBP10.77□□□□□ -0.69
ZNF248-208ENST00000611278 SOS1Q07889 1333 aaPredicted RBP10.76□□□□□ -0.69
ZNF248-208ENST00000611278 SH3TC1Q8TE82 1336 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 NOL10Q9BSC4 688 aaKnown RBP10.76□□□□□ -0.69
ZNF248-208ENST00000611278 COL13A1Q5TAT6 717 aaPredicted RBP10.76□□□□□ -0.69
ZNF248-208ENST00000611278 LDHDQ86WU2 507 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 CAPN15O75808 1086 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 TM4SF1P30408 202 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 CIAPIN1Q6FI81 312 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 SLC4A9Q96Q91 983 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 MCM10Q7L590 875 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 HOOK2Q96ED9 719 aa10.76□□□□□ -0.69
ZNF248-208ENST00000611278 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.76□□□□□ -0.69
ZNF248-208ENST00000611278 SBF1O95248 1867 aa10.75□□□□□ -0.69
ZNF248-208ENST00000611278 POLRMTO00411 1230 aaKnown RBP10.75□□□□□ -0.69
ZNF248-208ENST00000611278 HSPA1AP0DMV8 641 aaKnown RBP10.75□□□□□ -0.69
ZNF248-208ENST00000611278 HSPA1BP0DMV9 641 aaKnown RBP10.75□□□□□ -0.69
ZNF248-208ENST00000611278 PPEF1O14829 653 aaPredicted RBP10.75□□□□□ -0.69
ZNF248-208ENST00000611278 CTCFP49711 727 aaPredicted RBP10.75□□□□□ -0.69
ZNF248-208ENST00000611278 FKBP4Q02790 459 aaKnown RBP eCLIP10.75□□□□□ -0.69
ZNF248-208ENST00000611278 LGR6Q9HBX8 967 aa10.75□□□□□ -0.69
ZNF248-208ENST00000611278 CA12O43570 354 aa10.75□□□□□ -0.69
ZNF248-208ENST00000611278 DDR1Q08345 913 aa10.75□□□□□ -0.69
ZNF248-208ENST00000611278 A1BGP04217 495 aa10.74□□□□□ -0.69
ZNF248-208ENST00000611278 CWC22Q9HCG8 908 aaKnown RBP10.74□□□□□ -0.69
ZNF248-208ENST00000611278 IARSP41252 1262 aaKnown RBP10.74□□□□□ -0.69
ZNF248-208ENST00000611278 PRPF40BQ6NWY9 871 aaKnown RBP10.74□□□□□ -0.69
ZNF248-208ENST00000611278 ANKRD18AQ8IVF6 992 aa10.74□□□□□ -0.69
ZNF248-208ENST00000611278 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
ZNF248-208ENST00000611278 MYH14Q7Z406 1995 aaKnown RBP10.73□□□□□ -0.69
ZNF248-208ENST00000611278 SYNE4Q8N205 404 aa10.73□□□□□ -0.69
ZNF248-208ENST00000611278 C9orf78Q9NZ63 289 aaPredicted RBP10.73□□□□□ -0.69
ZNF248-208ENST00000611278 VPS33BQ9H267 617 aa10.73□□□□□ -0.69
ZNF248-208ENST00000611278 NSFL1CQ9UNZ2 370 aaKnown RBP10.73□□□□□ -0.69
ZNF248-208ENST00000611278 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
ZNF248-208ENST00000611278 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
ZNF248-208ENST00000611278 DLEC1Q9Y238 1755 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 RBM5P52756 815 aaKnown RBP eCLIP10.72□□□□□ -0.69
ZNF248-208ENST00000611278 TJP1Q07157 1748 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 CHMP4BQ9H444 224 aaKnown RBP10.72□□□□□ -0.69
ZNF248-208ENST00000611278 CREBZFQ9NS37 354 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
ZNF248-208ENST00000611278 SALL2Q9Y467 1007 aaPredicted RBP10.72□□□□□ -0.69
ZNF248-208ENST00000611278 MAP3K15Q6ZN16 1313 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 HOXB7P09629 217 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 ERICH6BQ5W0A0 696 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 ANKRD2Q9GZV1 360 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 PRDM10Q9NQV6 1147 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 LTBP3Q9NS15 1303 aa10.72□□□□□ -0.69
ZNF248-208ENST00000611278 EPHX2P34913 555 aa10.71□□□□□ -0.69
ZNF248-208ENST00000611278 EIF5P55010 431 aaKnown RBP10.71□□□□□ -0.69
ZNF248-208ENST00000611278 IRX6P78412 446 aaPredicted RBP10.71□□□□□ -0.69
ZNF248-208ENST00000611278 DEFB115Q30KQ5 88 aa10.71□□□□□ -0.69
ZNF248-208ENST00000611278 GORABQ5T7V8 394 aa10.71□□□□□ -0.69
ZNF248-208ENST00000611278 INTS5Q6P9B9 1019 aaKnown RBP10.71□□□□□ -0.69
ZNF248-208ENST00000611278 NRXN2Q9P2S2 1712 aa10.71□□□□□ -0.69
ZNF248-208ENST00000611278 TMEM88BA6NKF7 163 aa10.71□□□□□ -0.69
ZNF248-208ENST00000611278 GGA1Q9UJY5 639 aa10.71□□□□□ -0.69
ZNF248-208ENST00000611278 TNNI2P48788 182 aa10.71□□□□□ -0.7
ZNF248-208ENST00000611278 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.7
ZNF248-208ENST00000611278 WWC1Q8IX03 1113 aa10.71□□□□□ -0.7
ZNF248-208ENST00000611278 CWC25Q9NXE8 425 aaPredicted RBP10.71□□□□□ -0.7
ZNF248-208ENST00000611278 SCN11AQ9UI33 1791 aa10.71□□□□□ -0.7
ZNF248-208ENST00000611278 FKBP5Q13451 457 aaPredicted RBP10.7□□□□□ -0.7
ZNF248-208ENST00000611278 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
ZNF248-208ENST00000611278 CRAMP1Q96RY5 1269 aa10.7□□□□□ -0.7
ZNF248-208ENST00000611278 ANP32AP39687 249 aaKnown RBP10.7□□□□□ -0.7
ZNF248-208ENST00000611278 HTRA3P83110 453 aa10.7□□□□□ -0.7
ZNF248-208ENST00000611278 RASSF7Q02833 373 aa10.7□□□□□ -0.7
ZNF248-208ENST00000611278 TIAM2Q8IVF5 1701 aa10.7□□□□□ -0.7
ZNF248-208ENST00000611278 KIF22Q14807 665 aa10.7□□□□□ -0.7
ZNF248-208ENST00000611278 CCAR1Q8IX12 1150 aaKnown RBP10.7□□□□□ -0.7
ZNF248-208ENST00000611278 RBM26Q5T8P6 1007 aaKnown RBP10.69□□□□□ -0.7
ZNF248-208ENST00000611278 ARMC9Q7Z3E5 817 aa10.69□□□□□ -0.7
ZNF248-208ENST00000611278 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
ZNF248-208ENST00000611278 CNNM1Q9NRU3 951 aa10.69□□□□□ -0.7
ZNF248-208ENST00000611278 MRC1P22897 1456 aa10.69□□□□□ -0.7
ZNF248-208ENST00000611278 CCDC57Q2TAC2 916 aa10.69□□□□□ -0.7
ZNF248-208ENST00000611278 TBC1D9BQ66K14 1250 aa10.69□□□□□ -0.7
ZNF248-208ENST00000611278 OS9Q13438 667 aaPredicted RBP10.68□□□□□ -0.7
ZNF248-208ENST00000611278 WASHC4Q2M389 1173 aa10.68□□□□□ -0.7
ZNF248-208ENST00000611278 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
ZNF248-208ENST00000611278 DDX21Q9NR30 783 aaKnown RBP eCLIP10.68□□□□□ -0.7
ZNF248-208ENST00000611278 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
ZNF248-208ENST00000611278 AFDNP55196 1824 aaKnown RBP10.68□□□□□ -0.7
ZNF248-208ENST00000611278 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
ZNF248-208ENST00000611278 DICER1Q9UPY3 1922 aaKnown RBP10.68□□□□□ -0.7
ZNF248-208ENST00000611278 ADAMTS7Q9UKP4 1686 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms