RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 KIF6Q6ZMV9 814 aa23.07■■□□□ 1.28
CHMP4A-211ENST00000609024 LARGE2Q8N3Y3 721 aa23.07■■□□□ 1.28
CHMP4A-211ENST00000609024 DDX21Q9NR30 783 aaKnown RBP eCLIP23.07■■□□□ 1.28
CHMP4A-211ENST00000609024 HTATSF1O43719 755 aaKnown RBP23.06■■□□□ 1.28
CHMP4A-211ENST00000609024 HSPA8P11142 646 aaKnown RBP23.06■■□□□ 1.28
CHMP4A-211ENST00000609024 DCTN1Q14203 1278 aa23.06■■□□□ 1.28
CHMP4A-211ENST00000609024 TAF7Q15545 349 aaPredicted RBP23.06■■□□□ 1.28
CHMP4A-211ENST00000609024 ADAMTSL1Q8N6G6 1762 aa23.05■■□□□ 1.28
CHMP4A-211ENST00000609024 NUTM1Q86Y26 1132 aa23.05■■□□□ 1.28
CHMP4A-211ENST00000609024 ABHD8Q96I13 439 aa23.05■■□□□ 1.28
CHMP4A-211ENST00000609024 ERVV-1B6SEH8 477 aa23.03■■□□□ 1.28
CHMP4A-211ENST00000609024 CRY2Q49AN0 593 aa23.03■■□□□ 1.28
CHMP4A-211ENST00000609024 NIM1KQ8IY84 436 aa23.03■■□□□ 1.28
CHMP4A-211ENST00000609024 RBM17Q96I25 401 aaKnown RBP23.03■■□□□ 1.28
CHMP4A-211ENST00000609024 TCERG1O14776 1098 aaKnown RBP23.02■■□□□ 1.28
CHMP4A-211ENST00000609024 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
CHMP4A-211ENST00000609024 CAPNS2Q96L46 248 aa23.02■■□□□ 1.28
CHMP4A-211ENST00000609024 MIS18AQ9NYP9 233 aa23.02■■□□□ 1.28
CHMP4A-211ENST00000609024 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
CHMP4A-211ENST00000609024 USP50Q70EL3 339 aaPredicted RBP23.01■■□□□ 1.27
CHMP4A-211ENST00000609024 GPR101Q96P66 508 aaPredicted RBP23.01■■□□□ 1.27
CHMP4A-211ENST00000609024 MAP3K15Q6ZN16 1313 aa23.01■■□□□ 1.27
CHMP4A-211ENST00000609024 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
CHMP4A-211ENST00000609024 GPTP24298 496 aa23■■□□□ 1.27
CHMP4A-211ENST00000609024 EPS15P42566 896 aa23■■□□□ 1.27
CHMP4A-211ENST00000609024 ABCC12Q96J65 1359 aa23■■□□□ 1.27
CHMP4A-211ENST00000609024 CCDC85CA6NKD9 419 aa22.99■■□□□ 1.27
CHMP4A-211ENST00000609024 MYL6BP14649 208 aa22.99■■□□□ 1.27
CHMP4A-211ENST00000609024 HOXA10P31260 410 aaPredicted RBP22.99■■□□□ 1.27
CHMP4A-211ENST00000609024 PPIP5K2O43314 1243 aa22.98■■□□□ 1.27
CHMP4A-211ENST00000609024 FAM161AQ3B820 660 aa22.98■■□□□ 1.27
CHMP4A-211ENST00000609024 CYP4F22Q6NT55 531 aa22.98■■□□□ 1.27
CHMP4A-211ENST00000609024 CRAMP1Q96RY5 1269 aa22.98■■□□□ 1.27
CHMP4A-211ENST00000609024 ZBTB3Q9H5J0 574 aa22.98■■□□□ 1.27
CHMP4A-211ENST00000609024 LAMB4A4D0S4 1761 aa22.97■■□□□ 1.27
CHMP4A-211ENST00000609024 SCNN1DP51172 638 aa22.97■■□□□ 1.27
CHMP4A-211ENST00000609024 PPP1R42Q7Z4L9 355 aa22.97■■□□□ 1.27
CHMP4A-211ENST00000609024 PPP2R1AP30153 589 aa22.96■■□□□ 1.27
CHMP4A-211ENST00000609024 NLRP3Q96P20 1036 aa22.96■■□□□ 1.27
CHMP4A-211ENST00000609024 TTLL7Q6ZT98 887 aa22.95■■□□□ 1.26
CHMP4A-211ENST00000609024 SUPT20HQ8NEM7 779 aa22.95■■□□□ 1.26
CHMP4A-211ENST00000609024 ADARB2Q9NS39 739 aaKnown RBP22.95■■□□□ 1.26
CHMP4A-211ENST00000609024 IBTKQ9P2D0 1353 aaPredicted RBP22.95■■□□□ 1.26
CHMP4A-211ENST00000609024 NUP98P52948 1817 aa22.94■■□□□ 1.26
CHMP4A-211ENST00000609024 TRAF5O00463 557 aa22.94■■□□□ 1.26
CHMP4A-211ENST00000609024 MLLT1Q03111 559 aaPredicted RBP22.94■■□□□ 1.26
CHMP4A-211ENST00000609024 FMR1Q06787 632 aaKnown RBP eCLIP22.94■■□□□ 1.26
CHMP4A-211ENST00000609024 SUSD4Q5VX71 490 aa22.94■■□□□ 1.26
CHMP4A-211ENST00000609024 CFAP44Q96MT7 982 aa22.94■■□□□ 1.26
CHMP4A-211ENST00000609024 TLL2Q9Y6L7 1015 aa22.94■■□□□ 1.26
CHMP4A-211ENST00000609024 RIC1Q4ADV7 1423 aa22.93■■□□□ 1.26
CHMP4A-211ENST00000609024 SNED1Q8TER0 1413 aa22.93■■□□□ 1.26
CHMP4A-211ENST00000609024 MAP2K2P36507 400 aa22.93■■□□□ 1.26
CHMP4A-211ENST00000609024 VPS33BQ9H267 617 aa22.93■■□□□ 1.26
CHMP4A-211ENST00000609024 UBN2Q6ZU65 1347 aa22.92■■□□□ 1.26
CHMP4A-211ENST00000609024 AOC3Q16853 763 aa22.92■■□□□ 1.26
CHMP4A-211ENST00000609024 PARP10Q53GL7 1025 aa22.92■■□□□ 1.26
CHMP4A-211ENST00000609024 CST9Q5W186 159 aa22.92■■□□□ 1.26
CHMP4A-211ENST00000609024 GPRC5DQ9NZD1 345 aa22.92■■□□□ 1.26
CHMP4A-211ENST00000609024 TRPM7Q96QT4 1865 aa22.92■■□□□ 1.26
CHMP4A-211ENST00000609024 LTBP1Q14766 1721 aa22.91■■□□□ 1.26
CHMP4A-211ENST00000609024 COL4A5P29400 1685 aa22.91■■□□□ 1.26
CHMP4A-211ENST00000609024 CA12O43570 354 aa22.91■■□□□ 1.26
CHMP4A-211ENST00000609024 CELF2O95319 508 aaKnown RBP22.91■■□□□ 1.26
CHMP4A-211ENST00000609024 BCL2L13Q9BXK5 485 aa22.91■■□□□ 1.26
CHMP4A-211ENST00000609024 ZNRF3Q9ULT6 936 aa22.91■■□□□ 1.26
CHMP4A-211ENST00000609024 EIF4A1P60842 406 aaKnown RBP22.9■■□□□ 1.26
CHMP4A-211ENST00000609024 GIGYF2Q6Y7W6 1299 aaKnown RBP22.9■■□□□ 1.26
CHMP4A-211ENST00000609024 ZNF34Q8IZ26 560 aa22.9■■□□□ 1.26
CHMP4A-211ENST00000609024 ZNF408Q9H9D4 720 aa22.9■■□□□ 1.26
CHMP4A-211ENST00000609024 TSKSQ9UJT2 592 aa22.9■■□□□ 1.26
CHMP4A-211ENST00000609024 ATP6V0A2Q9Y487 856 aa22.9■■□□□ 1.26
CHMP4A-211ENST00000609024 AOC2O75106 756 aa22.89■■□□□ 1.25
CHMP4A-211ENST00000609024 NTSR2O95665 410 aa22.89■■□□□ 1.25
CHMP4A-211ENST00000609024 DPP8Q6V1X1 898 aaPredicted RBP22.89■■□□□ 1.25
CHMP4A-211ENST00000609024 UTP14AQ9BVJ6 771 aaKnown RBP22.89■■□□□ 1.25
CHMP4A-211ENST00000609024 TNIP1Q15025 636 aa22.88■■□□□ 1.25
CHMP4A-211ENST00000609024 PNNQ9H307 717 aaKnown RBP22.88■■□□□ 1.25
CHMP4A-211ENST00000609024 THSD7BQ9C0I4 1608 aa22.88■■□□□ 1.25
CHMP4A-211ENST00000609024 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
CHMP4A-211ENST00000609024 MAPK8IP3Q9UPT6 1336 aa22.87■■□□□ 1.25
CHMP4A-211ENST00000609024 CXCL9Q07325 125 aa22.87■■□□□ 1.25
CHMP4A-211ENST00000609024 CIAPIN1Q6FI81 312 aa22.87■■□□□ 1.25
CHMP4A-211ENST00000609024 SAPCD2Q86UD0 394 aa22.87■■□□□ 1.25
CHMP4A-211ENST00000609024 SLC34A2O95436 690 aa22.86■■□□□ 1.25
CHMP4A-211ENST00000609024 GMPSP49915 693 aaPredicted RBP22.86■■□□□ 1.25
CHMP4A-211ENST00000609024 MPNDQ8N594 471 aa22.86■■□□□ 1.25
CHMP4A-211ENST00000609024 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
CHMP4A-211ENST00000609024 BBOX1O75936 387 aa22.85■■□□□ 1.25
CHMP4A-211ENST00000609024 C3orf67Q6ZVT6 689 aa22.85■■□□□ 1.25
CHMP4A-211ENST00000609024 GLIS2Q9BZE0 524 aaPredicted RBP22.85■■□□□ 1.25
CHMP4A-211ENST00000609024 CDHR2Q9BYE9 1310 aa22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 EIF2S2P20042 333 aaKnown RBP22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 BRPF1P55201 1214 aaPredicted RBP22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 NFE2L2Q16236 605 aa22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 DDX46Q7L014 1031 aaKnown RBP22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 CDC37L1Q7L3B6 337 aa22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 ZC3H15Q8WU90 426 aaKnown RBP22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 HHIPL1Q96JK4 782 aa22.84■■□□□ 1.25
CHMP4A-211ENST00000609024 ABCC4O15439 1325 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms