RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
HDDC2-204ENST00000608295 CNKSR1Q969H4 720 aa18.7■□□□□ 0.58
HDDC2-204ENST00000608295 UTP14AQ9BVJ6 771 aaKnown RBP18.7■□□□□ 0.58
HDDC2-204ENST00000608295 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
HDDC2-204ENST00000608295 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
HDDC2-204ENST00000608295 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
HDDC2-204ENST00000608295 PRELPP51888 382 aa18.69■□□□□ 0.58
HDDC2-204ENST00000608295 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
HDDC2-204ENST00000608295 PARP10Q53GL7 1025 aa18.69■□□□□ 0.58
HDDC2-204ENST00000608295 RIC3Q7Z5B4 369 aa18.69■□□□□ 0.58
HDDC2-204ENST00000608295 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
HDDC2-204ENST00000608295 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
HDDC2-204ENST00000608295 TAF1P21675 1872 aa18.69■□□□□ 0.58
HDDC2-204ENST00000608295 HCLS1P14317 486 aaPredicted RBP18.68■□□□□ 0.58
HDDC2-204ENST00000608295 TCIRG1Q13488 830 aa18.68■□□□□ 0.58
HDDC2-204ENST00000608295 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
HDDC2-204ENST00000608295 CCDC30Q5VVM6 783 aa18.68■□□□□ 0.58
HDDC2-204ENST00000608295 ANKRD13DQ6ZTN6 518 aa18.68■□□□□ 0.58
HDDC2-204ENST00000608295 PLBD2Q8NHP8 589 aa18.68■□□□□ 0.58
HDDC2-204ENST00000608295 TRMT112Q9UI30 125 aaKnown RBP18.68■□□□□ 0.58
HDDC2-204ENST00000608295 PDZRN3Q9UPQ7 1066 aa18.68■□□□□ 0.58
HDDC2-204ENST00000608295 IL16Q14005 1332 aa18.68■□□□□ 0.58
HDDC2-204ENST00000608295 MYD88Q99836 296 aa18.67■□□□□ 0.58
HDDC2-204ENST00000608295 EXOSC9Q06265 439 aaKnown RBP18.66■□□□□ 0.58
HDDC2-204ENST00000608295 STK31Q9BXU1 1019 aa18.66■□□□□ 0.58
HDDC2-204ENST00000608295 RIC1Q4ADV7 1423 aa18.66■□□□□ 0.58
HDDC2-204ENST00000608295 WDR63Q8IWG1 891 aa18.65■□□□□ 0.58
HDDC2-204ENST00000608295 DICER1Q9UPY3 1922 aaKnown RBP18.64■□□□□ 0.58
HDDC2-204ENST00000608295 G2E3Q7L622 706 aa18.64■□□□□ 0.57
HDDC2-204ENST00000608295 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
HDDC2-204ENST00000608295 FAM89AQ96GI7 184 aa18.64■□□□□ 0.57
HDDC2-204ENST00000608295 TAOK3Q9H2K8 898 aa18.64■□□□□ 0.57
HDDC2-204ENST00000608295 NMRK2Q9NPI5 230 aa18.64■□□□□ 0.57
HDDC2-204ENST00000608295 SH3TC1Q8TE82 1336 aa18.64■□□□□ 0.57
HDDC2-204ENST00000608295 KLRG2A4D1S0 409 aaPredicted RBP18.63■□□□□ 0.57
HDDC2-204ENST00000608295 LMNB1P20700 586 aa18.63■□□□□ 0.57
HDDC2-204ENST00000608295 CRY2Q49AN0 593 aa18.63■□□□□ 0.57
HDDC2-204ENST00000608295 CCDC93Q567U6 631 aa18.63■□□□□ 0.57
HDDC2-204ENST00000608295 NLRP3Q96P20 1036 aa18.62■□□□□ 0.57
HDDC2-204ENST00000608295 ISCA1Q9BUE6 129 aa18.62■□□□□ 0.57
HDDC2-204ENST00000608295 MAP3K2Q9Y2U5 619 aa18.62■□□□□ 0.57
HDDC2-204ENST00000608295 COL4A1P02462 1669 aa18.61■□□□□ 0.57
HDDC2-204ENST00000608295 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
HDDC2-204ENST00000608295 RBM17Q96I25 401 aaKnown RBP18.61■□□□□ 0.57
HDDC2-204ENST00000608295 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
HDDC2-204ENST00000608295 ABCC4O15439 1325 aa18.6■□□□□ 0.57
HDDC2-204ENST00000608295 PPEF1O14829 653 aaPredicted RBP18.6■□□□□ 0.57
HDDC2-204ENST00000608295 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
HDDC2-204ENST00000608295 ALDH1B1P30837 517 aa18.6■□□□□ 0.57
HDDC2-204ENST00000608295 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
HDDC2-204ENST00000608295 C7orf43Q8WVR3 580 aa18.6■□□□□ 0.57
HDDC2-204ENST00000608295 ZNF277Q9NRM2 450 aaPredicted RBP18.6■□□□□ 0.57
HDDC2-204ENST00000608295 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
HDDC2-204ENST00000608295 C1QTNF8P60827 252 aa18.59■□□□□ 0.57
HDDC2-204ENST00000608295 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
HDDC2-204ENST00000608295 SOGA3Q5TF21 947 aa18.59■□□□□ 0.57
HDDC2-204ENST00000608295 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
HDDC2-204ENST00000608295 SPEF2Q9C093 1822 aa18.58■□□□□ 0.57
HDDC2-204ENST00000608295 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
HDDC2-204ENST00000608295 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
HDDC2-204ENST00000608295 MIER1Q8N108 512 aa18.58■□□□□ 0.56
HDDC2-204ENST00000608295 ZNF521Q96K83 1311 aa18.57■□□□□ 0.56
HDDC2-204ENST00000608295 KIF3CO14782 793 aa18.57■□□□□ 0.56
HDDC2-204ENST00000608295 VAMP4O75379 141 aa18.57■□□□□ 0.56
HDDC2-204ENST00000608295 FLIIQ13045 1269 aa18.57■□□□□ 0.56
HDDC2-204ENST00000608295 FKBP5Q13451 457 aaPredicted RBP18.57■□□□□ 0.56
HDDC2-204ENST00000608295 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
HDDC2-204ENST00000608295 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
HDDC2-204ENST00000608295 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
HDDC2-204ENST00000608295 CACNA1FO60840 1977 aa18.57■□□□□ 0.56
HDDC2-204ENST00000608295 LTBP3Q9NS15 1303 aa18.56■□□□□ 0.56
HDDC2-204ENST00000608295 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
HDDC2-204ENST00000608295 HOXA10P31260 410 aaPredicted RBP18.56■□□□□ 0.56
HDDC2-204ENST00000608295 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDDC2-204ENST00000608295 SLC10A5Q5PT55 438 aa18.56■□□□□ 0.56
HDDC2-204ENST00000608295 KSR2Q6VAB6 950 aa18.56■□□□□ 0.56
HDDC2-204ENST00000608295 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
HDDC2-204ENST00000608295 KDM2BQ8NHM5 1336 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 COL4A5P29400 1685 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 DDX46Q7L014 1031 aaKnown RBP18.55■□□□□ 0.56
HDDC2-204ENST00000608295 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 CRAMP1Q96RY5 1269 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 CHMP4AQ9BY43 222 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 RRAGCQ9HB90 399 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 MYH3P11055 1940 aa18.55■□□□□ 0.56
HDDC2-204ENST00000608295 F6X3S4 739 aa18.53■□□□□ 0.56
HDDC2-204ENST00000608295 IGKV5-2P06315 115 aa18.53■□□□□ 0.56
HDDC2-204ENST00000608295 NEXNQ0ZGT2 675 aa18.53■□□□□ 0.56
HDDC2-204ENST00000608295 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
HDDC2-204ENST00000608295 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
HDDC2-204ENST00000608295 LRRC37AA6NMS7 1700 aa18.52■□□□□ 0.56
HDDC2-204ENST00000608295 IARSP41252 1262 aaKnown RBP18.52■□□□□ 0.56
HDDC2-204ENST00000608295 GRAPQ13588 217 aa18.52■□□□□ 0.56
HDDC2-204ENST00000608295 C16orf71Q8IYS4 520 aaPredicted RBP18.52■□□□□ 0.56
HDDC2-204ENST00000608295 ZBTB38Q8NAP3 1195 aaPredicted RBP18.52■□□□□ 0.56
HDDC2-204ENST00000608295 CCDC191Q8NCU4 936 aa18.52■□□□□ 0.56
HDDC2-204ENST00000608295 GRAPLQ8TC17 118 aaPredicted RBP18.52■□□□□ 0.56
HDDC2-204ENST00000608295 CELF1Q92879 486 aaKnown RBP18.52■□□□□ 0.56
HDDC2-204ENST00000608295 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms