RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
CTSA-219ENST00000607841 NUP98P52948 1817 aa18.12■□□□□ 0.49
CTSA-219ENST00000607841 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
CTSA-219ENST00000607841 HSP90B1P14625 803 aaKnown RBP18.12■□□□□ 0.49
CTSA-219ENST00000607841 DPEP1P16444 411 aa18.12■□□□□ 0.49
CTSA-219ENST00000607841 C2CD5Q86YS7 1000 aa18.12■□□□□ 0.49
CTSA-219ENST00000607841 LINS1Q8NG48 757 aa18.12■□□□□ 0.49
CTSA-219ENST00000607841 SLC10A5Q5PT55 438 aa18.11■□□□□ 0.49
CTSA-219ENST00000607841 ZBTB38Q8NAP3 1195 aaPredicted RBP18.11■□□□□ 0.49
CTSA-219ENST00000607841 PIM2Q9P1W9 311 aa18.11■□□□□ 0.49
CTSA-219ENST00000607841 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
CTSA-219ENST00000607841 KIF16BQ96L93 1317 aa18.11■□□□□ 0.49
CTSA-219ENST00000607841 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
CTSA-219ENST00000607841 NEURL1BA8MQ27 555 aa18.1■□□□□ 0.49
CTSA-219ENST00000607841 F6X3S4 739 aa18.1■□□□□ 0.49
CTSA-219ENST00000607841 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
CTSA-219ENST00000607841 IGKV5-2P06315 115 aa18.1■□□□□ 0.49
CTSA-219ENST00000607841 CHRNA5P30532 468 aa18.1■□□□□ 0.49
CTSA-219ENST00000607841 SLC4A10Q6U841 1118 aa18.1■□□□□ 0.49
CTSA-219ENST00000607841 NLRP3Q96P20 1036 aa18.1■□□□□ 0.49
CTSA-219ENST00000607841 API5Q9BZZ5 524 aaKnown RBP18.1■□□□□ 0.49
CTSA-219ENST00000607841 KLRG2A4D1S0 409 aaPredicted RBP18.09■□□□□ 0.49
CTSA-219ENST00000607841 CWF19L2Q2TBE0 894 aaKnown RBP18.09■□□□□ 0.49
CTSA-219ENST00000607841 ARHGAP45Q92619 1136 aa18.09■□□□□ 0.49
CTSA-219ENST00000607841 FAM89AQ96GI7 184 aa18.09■□□□□ 0.49
CTSA-219ENST00000607841 CACNA1FO60840 1977 aa18.09■□□□□ 0.49
CTSA-219ENST00000607841 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.49
CTSA-219ENST00000607841 ABCC12Q96J65 1359 aa18.08■□□□□ 0.49
CTSA-219ENST00000607841 AFDNP55196 1824 aaKnown RBP18.08■□□□□ 0.48
CTSA-219ENST00000607841 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
CTSA-219ENST00000607841 KCNA3P22001 575 aa18.08■□□□□ 0.48
CTSA-219ENST00000607841 GPR162Q16538 588 aa18.08■□□□□ 0.48
CTSA-219ENST00000607841 BEND3Q5T5X7 828 aa18.08■□□□□ 0.48
CTSA-219ENST00000607841 ZNF622Q969S3 477 aaKnown RBP eCLIP18.08■□□□□ 0.48
CTSA-219ENST00000607841 MASTLQ96GX5 879 aa18.08■□□□□ 0.48
CTSA-219ENST00000607841 ARFGEF2Q9Y6D5 1785 aa18.08■□□□□ 0.48
CTSA-219ENST00000607841 BCAR3O75815 825 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 SRGNP10124 158 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 NPR1P16066 1061 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 GCKRQ14397 625 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 DALRD3Q5D0E6 543 aaKnown RBP18.07■□□□□ 0.48
CTSA-219ENST00000607841 STYK1Q6J9G0 422 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
CTSA-219ENST00000607841 SRCIN1Q9C0H9 1055 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
CTSA-219ENST00000607841 IRS4O14654 1257 aaPredicted RBP18.06■□□□□ 0.48
CTSA-219ENST00000607841 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
CTSA-219ENST00000607841 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
CTSA-219ENST00000607841 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
CTSA-219ENST00000607841 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
CTSA-219ENST00000607841 ANKRD36CQ5JPF3 1778 aa18.06■□□□□ 0.48
CTSA-219ENST00000607841 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
CTSA-219ENST00000607841 ALDH1B1P30837 517 aa18.05■□□□□ 0.48
CTSA-219ENST00000607841 SYNE4Q8N205 404 aa18.05■□□□□ 0.48
CTSA-219ENST00000607841 TTLL6Q8N841 843 aa18.05■□□□□ 0.48
CTSA-219ENST00000607841 RPGRQ92834 1020 aaKnown RBP18.05■□□□□ 0.48
CTSA-219ENST00000607841 FRAT1Q92837 279 aaPredicted RBP18.05■□□□□ 0.48
CTSA-219ENST00000607841 BCS1LQ9Y276 419 aa18.05■□□□□ 0.48
CTSA-219ENST00000607841 CDHR2Q9BYE9 1310 aa18.04■□□□□ 0.48
CTSA-219ENST00000607841 H7C1W4 665 aa18.04■□□□□ 0.48
CTSA-219ENST00000607841 YY1P25490 414 aa18.04■□□□□ 0.48
CTSA-219ENST00000607841 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
CTSA-219ENST00000607841 RBM17Q96I25 401 aaKnown RBP18.04■□□□□ 0.48
CTSA-219ENST00000607841 WWC3Q9ULE0 1092 aa18.04■□□□□ 0.48
CTSA-219ENST00000607841 PDE8AO60658 829 aa18.03■□□□□ 0.48
CTSA-219ENST00000607841 ZKSCAN2Q63HK3 967 aa18.03■□□□□ 0.48
CTSA-219ENST00000607841 ATF7IPQ6VMQ6 1270 aa18.03■□□□□ 0.48
CTSA-219ENST00000607841 C9orf78Q9NZ63 289 aaPredicted RBP18.03■□□□□ 0.48
CTSA-219ENST00000607841 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
CTSA-219ENST00000607841 HOXA10P31260 410 aaPredicted RBP18.02■□□□□ 0.48
CTSA-219ENST00000607841 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
CTSA-219ENST00000607841 GRM8O00222 908 aa18.01■□□□□ 0.47
CTSA-219ENST00000607841 YBX3P16989 372 aaKnown RBP eCLIP18.01■□□□□ 0.47
CTSA-219ENST00000607841 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
CTSA-219ENST00000607841 C3orf67Q6ZVT6 689 aa18.01■□□□□ 0.47
CTSA-219ENST00000607841 JARID2Q92833 1246 aaPredicted RBP18.01■□□□□ 0.47
CTSA-219ENST00000607841 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
CTSA-219ENST00000607841 TRIM27P14373 513 aa18■□□□□ 0.47
CTSA-219ENST00000607841 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
CTSA-219ENST00000607841 KIAA1551Q9HCM1 1747 aa17.99■□□□□ 0.47
CTSA-219ENST00000607841 CCDC152Q4G0S7 254 aa17.99■□□□□ 0.47
CTSA-219ENST00000607841 PRPF40BQ6NWY9 871 aaKnown RBP17.99■□□□□ 0.47
CTSA-219ENST00000607841 PLA2G12BQ9BX93 195 aa17.99■□□□□ 0.47
CTSA-219ENST00000607841 ANKRD31Q8N7Z5 1873 aa17.99■□□□□ 0.47
CTSA-219ENST00000607841 MS4A1P11836 297 aa17.98■□□□□ 0.47
CTSA-219ENST00000607841 CASP7P55210 303 aa17.98■□□□□ 0.47
CTSA-219ENST00000607841 SOGA3Q5TF21 947 aa17.98■□□□□ 0.47
CTSA-219ENST00000607841 TMX4Q9H1E5 349 aaPredicted RBP17.98■□□□□ 0.47
CTSA-219ENST00000607841 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
CTSA-219ENST00000607841 ABCC4O15439 1325 aa17.98■□□□□ 0.47
CTSA-219ENST00000607841 BBOX1O75936 387 aa17.97■□□□□ 0.47
CTSA-219ENST00000607841 CTSWP56202 376 aa17.97■□□□□ 0.47
CTSA-219ENST00000607841 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
CTSA-219ENST00000607841 FTSJ3Q8IY81 847 aaKnown RBP17.97■□□□□ 0.47
CTSA-219ENST00000607841 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
CTSA-219ENST00000607841 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
CTSA-219ENST00000607841 UTYO14607 1347 aa17.97■□□□□ 0.47
CTSA-219ENST00000607841 GRAPQ13588 217 aa17.96■□□□□ 0.47
CTSA-219ENST00000607841 GRAPLQ8TC17 118 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms