RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
CTSA-218ENST00000607814 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
CTSA-218ENST00000607814 MAP1SQ66K74 1059 aaPredicted RBP17.92■□□□□ 0.46
CTSA-218ENST00000607814 PSMD1Q99460 953 aa17.92■□□□□ 0.46
CTSA-218ENST00000607814 ABT1Q9ULW3 272 aaKnown RBP17.92■□□□□ 0.46
CTSA-218ENST00000607814 FAM161AQ3B820 660 aa17.91■□□□□ 0.46
CTSA-218ENST00000607814 JDP2Q8WYK2 163 aa17.91■□□□□ 0.46
CTSA-218ENST00000607814 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTSA-218ENST00000607814 ECE1P42892 770 aa17.9■□□□□ 0.46
CTSA-218ENST00000607814 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
CTSA-218ENST00000607814 CC2D2BQ6DHV5 1058 aa17.9■□□□□ 0.46
CTSA-218ENST00000607814 SYNE4Q8N205 404 aa17.9■□□□□ 0.46
CTSA-218ENST00000607814 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
CTSA-218ENST00000607814 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
CTSA-218ENST00000607814 SNRPA1P09661 255 aaKnown RBP17.89■□□□□ 0.45
CTSA-218ENST00000607814 RGS19P49795 217 aa17.89■□□□□ 0.45
CTSA-218ENST00000607814 NIP7Q9Y221 180 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTSA-218ENST00000607814 SNED1Q8TER0 1413 aa17.89■□□□□ 0.45
CTSA-218ENST00000607814 LMOD1P29536 600 aaPredicted RBP17.88■□□□□ 0.45
CTSA-218ENST00000607814 EIF6P56537 245 aaKnown RBP17.88■□□□□ 0.45
CTSA-218ENST00000607814 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
CTSA-218ENST00000607814 MLLT1Q03111 559 aaPredicted RBP17.87■□□□□ 0.45
CTSA-218ENST00000607814 CRY2Q49AN0 593 aa17.87■□□□□ 0.45
CTSA-218ENST00000607814 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
CTSA-218ENST00000607814 CAPNS2Q96L46 248 aa17.86■□□□□ 0.45
CTSA-218ENST00000607814 PCDH10Q9P2E7 1040 aa17.86■□□□□ 0.45
CTSA-218ENST00000607814 LAS1LQ9Y4W2 734 aaKnown RBP17.86■□□□□ 0.45
CTSA-218ENST00000607814 GTF2E1P29083 439 aaPredicted RBP17.85■□□□□ 0.45
CTSA-218ENST00000607814 MAP2K2P36507 400 aa17.85■□□□□ 0.45
CTSA-218ENST00000607814 USP50Q70EL3 339 aaPredicted RBP17.85■□□□□ 0.45
CTSA-218ENST00000607814 NGEFQ8N5V2 710 aa17.85■□□□□ 0.45
CTSA-218ENST00000607814 GPR101Q96P66 508 aaPredicted RBP17.85■□□□□ 0.45
CTSA-218ENST00000607814 NYXQ9GZU5 481 aa17.85■□□□□ 0.45
CTSA-218ENST00000607814 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
CTSA-218ENST00000607814 NBPF26B4DH59 902 aa17.84■□□□□ 0.45
CTSA-218ENST00000607814 ANP32CO43423 234 aa17.84■□□□□ 0.45
CTSA-218ENST00000607814 CA12O43570 354 aa17.84■□□□□ 0.45
CTSA-218ENST00000607814 EIF4A1P60842 406 aaKnown RBP17.84■□□□□ 0.45
CTSA-218ENST00000607814 NBPF10Q6P3W6 841 aaKnown RBP17.84■□□□□ 0.45
CTSA-218ENST00000607814 NBPF15Q8N660 670 aa17.84■□□□□ 0.45
CTSA-218ENST00000607814 TSPYL4Q9UJ04 414 aa17.84■□□□□ 0.45
CTSA-218ENST00000607814 APAF1O14727 1248 aa17.83■□□□□ 0.44
CTSA-218ENST00000607814 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
CTSA-218ENST00000607814 SCNN1DP51172 638 aa17.83■□□□□ 0.44
CTSA-218ENST00000607814 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.44
CTSA-218ENST00000607814 GJA3Q9Y6H8 435 aa17.83■□□□□ 0.44
CTSA-218ENST00000607814 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
CTSA-218ENST00000607814 TRPM7Q96QT4 1865 aa17.82■□□□□ 0.44
CTSA-218ENST00000607814 CCDC85CA6NKD9 419 aa17.82■□□□□ 0.44
CTSA-218ENST00000607814 TLL2Q9Y6L7 1015 aa17.82■□□□□ 0.44
CTSA-218ENST00000607814 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
CTSA-218ENST00000607814 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
CTSA-218ENST00000607814 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
CTSA-218ENST00000607814 CST9Q5W186 159 aa17.81■□□□□ 0.44
CTSA-218ENST00000607814 CYP4F22Q6NT55 531 aa17.81■□□□□ 0.44
CTSA-218ENST00000607814 PAXIP1Q6ZW49 1069 aaPredicted RBP17.81■□□□□ 0.44
CTSA-218ENST00000607814 LARGE2Q8N3Y3 721 aa17.81■□□□□ 0.44
CTSA-218ENST00000607814 IBTKQ9P2D0 1353 aaPredicted RBP17.8■□□□□ 0.44
CTSA-218ENST00000607814 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 EPS15P42566 896 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 HLFQ16534 295 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 NECTIN2Q92692 538 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
CTSA-218ENST00000607814 HHIPL1Q96JK4 782 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 VPS33BQ9H267 617 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 MRS2Q9HD23 443 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 COL4A5P29400 1685 aa17.8■□□□□ 0.44
CTSA-218ENST00000607814 MYL6BP14649 208 aa17.79■□□□□ 0.44
CTSA-218ENST00000607814 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
CTSA-218ENST00000607814 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
CTSA-218ENST00000607814 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
CTSA-218ENST00000607814 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
CTSA-218ENST00000607814 NIM1KQ8IY84 436 aa17.78■□□□□ 0.44
CTSA-218ENST00000607814 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
CTSA-218ENST00000607814 KDM3BQ7LBC6 1761 aa17.78■□□□□ 0.44
CTSA-218ENST00000607814 ANXA1P04083 346 aa17.77■□□□□ 0.44
CTSA-218ENST00000607814 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.44
CTSA-218ENST00000607814 SAPCD2Q86UD0 394 aa17.77■□□□□ 0.44
CTSA-218ENST00000607814 PDE4DIPQ5VU43 2346 aa17.77■□□□□ 0.43
CTSA-218ENST00000607814 TNRC18O15417 2968 aaPredicted RBP17.76■□□□□ 0.43
CTSA-218ENST00000607814 TRAF5O00463 557 aa17.76■□□□□ 0.43
CTSA-218ENST00000607814 FMR1Q06787 632 aaKnown RBP eCLIP17.76■□□□□ 0.43
CTSA-218ENST00000607814 GRM1Q13255 1194 aa17.76■□□□□ 0.43
CTSA-218ENST00000607814 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
CTSA-218ENST00000607814 RBM17Q96I25 401 aaKnown RBP17.76■□□□□ 0.43
CTSA-218ENST00000607814 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
CTSA-218ENST00000607814 GPRC5DQ9NZD1 345 aa17.76■□□□□ 0.43
CTSA-218ENST00000607814 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
CTSA-218ENST00000607814 MAP3K15Q6ZN16 1313 aa17.75■□□□□ 0.43
CTSA-218ENST00000607814 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
CTSA-218ENST00000607814 CHL1O00533 1208 aa17.75■□□□□ 0.43
CTSA-218ENST00000607814 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
CTSA-218ENST00000607814 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
CTSA-218ENST00000607814 NUP98P52948 1817 aa17.75■□□□□ 0.43
CTSA-218ENST00000607814 AOC2O75106 756 aa17.74■□□□□ 0.43
CTSA-218ENST00000607814 PROSER3Q2NL68 480 aa17.74■□□□□ 0.43
CTSA-218ENST00000607814 KIF6Q6ZMV9 814 aa17.74■□□□□ 0.43
CTSA-218ENST00000607814 TTLL7Q6ZT98 887 aa17.74■□□□□ 0.43
CTSA-218ENST00000607814 ZC3H15Q8WU90 426 aaKnown RBP17.74■□□□□ 0.43
CTSA-218ENST00000607814 MCOLN1Q9GZU1 580 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms