RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 NFKBIEO00221 500 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 C21orf2O43822 256 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
LINC01001-203ENST00000607448 GPBP1L1Q9HC44 474 aaPredicted RBP13.45□□□□□ -0.26
LINC01001-203ENST00000607448 DDX21Q9NR30 783 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC01001-203ENST00000607448 KLRG2A4D1S0 409 aaPredicted RBP13.44□□□□□ -0.26
LINC01001-203ENST00000607448 NTSR2O95665 410 aa13.44□□□□□ -0.26
LINC01001-203ENST00000607448 GNAI1P63096 354 aa13.44□□□□□ -0.26
LINC01001-203ENST00000607448 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
LINC01001-203ENST00000607448 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
LINC01001-203ENST00000607448 TRMT2AQ8IZ69 625 aaKnown RBP13.44□□□□□ -0.26
LINC01001-203ENST00000607448 C8orf58Q8NAV2 365 aa13.44□□□□□ -0.26
LINC01001-203ENST00000607448 TSR2Q969E8 191 aaKnown RBP13.44□□□□□ -0.26
LINC01001-203ENST00000607448 ZNF428Q96B54 188 aa13.44□□□□□ -0.26
LINC01001-203ENST00000607448 MASTLQ96GX5 879 aa13.44□□□□□ -0.26
LINC01001-203ENST00000607448 RNF181Q9P0P0 153 aa13.44□□□□□ -0.26
LINC01001-203ENST00000607448 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
LINC01001-203ENST00000607448 HOXB7P09629 217 aa13.43□□□□□ -0.26
LINC01001-203ENST00000607448 STYK1Q6J9G0 422 aa13.43□□□□□ -0.26
LINC01001-203ENST00000607448 OLFM4Q6UX06 510 aa13.43□□□□□ -0.26
LINC01001-203ENST00000607448 SLC51AQ86UW1 340 aa13.43□□□□□ -0.26
LINC01001-203ENST00000607448 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
LINC01001-203ENST00000607448 C1QTNF8P60827 252 aa13.42□□□□□ -0.26
LINC01001-203ENST00000607448 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
LINC01001-203ENST00000607448 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
LINC01001-203ENST00000607448 IPO9Q96P70 1041 aaKnown RBP13.42□□□□□ -0.26
LINC01001-203ENST00000607448 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
LINC01001-203ENST00000607448 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
LINC01001-203ENST00000607448 IBTKQ9P2D0 1353 aaPredicted RBP13.42□□□□□ -0.26
LINC01001-203ENST00000607448 RIC1Q4ADV7 1423 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
LINC01001-203ENST00000607448 CCDC27Q2M243 656 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 NYXQ9GZU5 481 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 CEP350Q5VT06 3117 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 E9PSI1 815 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 KIF3CO14782 793 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 NPR1P16066 1061 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
LINC01001-203ENST00000607448 CRY2Q49AN0 593 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 CNKSR1Q969H4 720 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
LINC01001-203ENST00000607448 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
LINC01001-203ENST00000607448 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
LINC01001-203ENST00000607448 COL4A1P02462 1669 aa13.4□□□□□ -0.26
LINC01001-203ENST00000607448 NLRP10Q86W26 655 aa13.4□□□□□ -0.26
LINC01001-203ENST00000607448 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
LINC01001-203ENST00000607448 LMNB1P20700 586 aa13.39□□□□□ -0.27
LINC01001-203ENST00000607448 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
LINC01001-203ENST00000607448 PLIN1O60240 522 aa13.38□□□□□ -0.27
LINC01001-203ENST00000607448 TCIRG1Q13488 830 aa13.38□□□□□ -0.27
LINC01001-203ENST00000607448 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
LINC01001-203ENST00000607448 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
LINC01001-203ENST00000607448 PPP1R42Q7Z4L9 355 aa13.38□□□□□ -0.27
LINC01001-203ENST00000607448 PLBD2Q8NHP8 589 aa13.38□□□□□ -0.27
LINC01001-203ENST00000607448 PDE4AP27815 886 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 ANKRD13DQ6ZTN6 518 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
LINC01001-203ENST00000607448 BACH2Q9BYV9 841 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
LINC01001-203ENST00000607448 HYPKQ9NX55 129 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 CACNA1FO60840 1977 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 COL4A5P29400 1685 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 ATP5J2-PTCD1G3V325 749 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 TAOK3Q9H2K8 898 aa13.37□□□□□ -0.27
LINC01001-203ENST00000607448 WDR90Q96KV7 1748 aa13.36□□□□□ -0.27
LINC01001-203ENST00000607448 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
LINC01001-203ENST00000607448 LTBP3Q9NS15 1303 aa13.36□□□□□ -0.27
LINC01001-203ENST00000607448 HCLS1P14317 486 aaPredicted RBP13.36□□□□□ -0.27
LINC01001-203ENST00000607448 HSP90AB3PQ58FF7 597 aa13.36□□□□□ -0.27
LINC01001-203ENST00000607448 ISCA1Q9BUE6 129 aa13.36□□□□□ -0.27
LINC01001-203ENST00000607448 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
LINC01001-203ENST00000607448 IL16Q14005 1332 aa13.35□□□□□ -0.27
LINC01001-203ENST00000607448 LRRC37AA6NMS7 1700 aa13.35□□□□□ -0.27
LINC01001-203ENST00000607448 ALDH1B1P30837 517 aa13.35□□□□□ -0.27
LINC01001-203ENST00000607448 HOXA10P31260 410 aaPredicted RBP13.35□□□□□ -0.27
LINC01001-203ENST00000607448 SLC10A5Q5PT55 438 aa13.35□□□□□ -0.27
LINC01001-203ENST00000607448 RPGRQ92834 1020 aaKnown RBP13.35□□□□□ -0.27
LINC01001-203ENST00000607448 TRMT112Q9UI30 125 aaKnown RBP13.35□□□□□ -0.27
LINC01001-203ENST00000607448 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
LINC01001-203ENST00000607448 CCDC93Q567U6 631 aa13.34□□□□□ -0.27
LINC01001-203ENST00000607448 RTL5Q5HYW3 569 aaPredicted RBP13.34□□□□□ -0.27
LINC01001-203ENST00000607448 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
LINC01001-203ENST00000607448 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
LINC01001-203ENST00000607448 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
LINC01001-203ENST00000607448 MYH3P11055 1940 aa13.34□□□□□ -0.27
LINC01001-203ENST00000607448 ABCC4O15439 1325 aa13.34□□□□□ -0.27
LINC01001-203ENST00000607448 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
LINC01001-203ENST00000607448 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
LINC01001-203ENST00000607448 G2E3Q7L622 706 aa13.33□□□□□ -0.28
LINC01001-203ENST00000607448 NLRP3Q96P20 1036 aa13.33□□□□□ -0.28
LINC01001-203ENST00000607448 SH3TC1Q8TE82 1336 aa13.33□□□□□ -0.28
LINC01001-203ENST00000607448 ZC3H4Q9UPT8 1303 aaKnown RBP13.33□□□□□ -0.28
LINC01001-203ENST00000607448 GLTPD2A6NH11 291 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 FKBP4Q02790 459 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01001-203ENST00000607448 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 RIC3Q7Z5B4 369 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 CRAMP1Q96RY5 1269 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms