RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 ANKRD36CQ5JPF3 1778 aa12.96□□□□□ -0.34
CTSA-215ENST00000607187 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
CTSA-215ENST00000607187 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 H0YIN7 160 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 PYGBP11216 843 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 PDE6BP35913 854 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 HDGFL1Q5TGJ6 251 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 NBPF5PQ86XG9 351 aaPredicted RBP12.95□□□□□ -0.34
CTSA-215ENST00000607187 C2CD5Q86YS7 1000 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTSA-215ENST00000607187 SBF1O95248 1867 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
CTSA-215ENST00000607187 NPHP1O15259 732 aa12.94□□□□□ -0.34
CTSA-215ENST00000607187 ST5P78524 1137 aa12.94□□□□□ -0.34
CTSA-215ENST00000607187 TPTE2Q6XPS3 522 aa12.94□□□□□ -0.34
CTSA-215ENST00000607187 ZNF784Q8NCA9 323 aaPredicted RBP12.94□□□□□ -0.34
CTSA-215ENST00000607187 ZBTB3Q9H5J0 574 aa12.94□□□□□ -0.34
CTSA-215ENST00000607187 WDR70Q9NW82 654 aa12.94□□□□□ -0.34
CTSA-215ENST00000607187 CHPF2Q9P2E5 772 aa12.94□□□□□ -0.34
CTSA-215ENST00000607187 GIGYF2Q6Y7W6 1299 aaKnown RBP12.93□□□□□ -0.34
CTSA-215ENST00000607187 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
CTSA-215ENST00000607187 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
CTSA-215ENST00000607187 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
CTSA-215ENST00000607187 ARFGEF2Q9Y6D5 1785 aa12.93□□□□□ -0.34
CTSA-215ENST00000607187 IL16Q14005 1332 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 CCDC88AQ3V6T2 1871 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
CTSA-215ENST00000607187 IBTKQ9P2D0 1353 aaPredicted RBP12.92□□□□□ -0.34
CTSA-215ENST00000607187 UBN2Q6ZU65 1347 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
CTSA-215ENST00000607187 FAM177BA6PVY3 158 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
CTSA-215ENST00000607187 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 SRGNP10124 158 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 GPTP24298 496 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
CTSA-215ENST00000607187 NYXQ9GZU5 481 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
CTSA-215ENST00000607187 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 ADCY9O60503 1353 aa12.91□□□□□ -0.34
CTSA-215ENST00000607187 TNRC6CQ9HCJ0 1690 aaKnown RBP12.9□□□□□ -0.34
CTSA-215ENST00000607187 SUSD4Q5VX71 490 aa12.9□□□□□ -0.34
CTSA-215ENST00000607187 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
CTSA-215ENST00000607187 TSPYL6Q8N831 410 aa12.9□□□□□ -0.34
CTSA-215ENST00000607187 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
CTSA-215ENST00000607187 ZNF622Q969S3 477 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTSA-215ENST00000607187 HYPKQ9NX55 129 aa12.9□□□□□ -0.34
CTSA-215ENST00000607187 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
CTSA-215ENST00000607187 FER1L6Q2WGJ9 1857 aa12.9□□□□□ -0.34
CTSA-215ENST00000607187 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
CTSA-215ENST00000607187 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
CTSA-215ENST00000607187 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
CTSA-215ENST00000607187 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
CTSA-215ENST00000607187 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
CTSA-215ENST00000607187 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
CTSA-215ENST00000607187 MASTLQ96GX5 879 aa12.89□□□□□ -0.35
CTSA-215ENST00000607187 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
CTSA-215ENST00000607187 NTSR2O95665 410 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 TCIRG1Q13488 830 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 ERFEQ4G0M1 354 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 CNKSR1Q969H4 720 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
CTSA-215ENST00000607187 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
CTSA-215ENST00000607187 NPR1P16066 1061 aa12.87□□□□□ -0.35
CTSA-215ENST00000607187 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
CTSA-215ENST00000607187 DICER1Q9UPY3 1922 aaKnown RBP12.87□□□□□ -0.35
CTSA-215ENST00000607187 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
CTSA-215ENST00000607187 LAMB2P55268 1798 aa12.86□□□□□ -0.35
CTSA-215ENST00000607187 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
CTSA-215ENST00000607187 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
CTSA-215ENST00000607187 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
CTSA-215ENST00000607187 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
CTSA-215ENST00000607187 UTP14AQ9BVJ6 771 aaKnown RBP12.86□□□□□ -0.35
CTSA-215ENST00000607187 PHAXQ9H814 394 aaKnown RBP12.86□□□□□ -0.35
CTSA-215ENST00000607187 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
CTSA-215ENST00000607187 C21orf2O43822 256 aa12.85□□□□□ -0.35
CTSA-215ENST00000607187 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
CTSA-215ENST00000607187 SLC10A5Q5PT55 438 aa12.85□□□□□ -0.35
CTSA-215ENST00000607187 C9orf131Q5VYM1 1079 aa12.85□□□□□ -0.35
CTSA-215ENST00000607187 HOMEZQ8IX15 550 aa12.85□□□□□ -0.35
CTSA-215ENST00000607187 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
CTSA-215ENST00000607187 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
CTSA-215ENST00000607187 ALDH1B1P30837 517 aa12.84□□□□□ -0.35
CTSA-215ENST00000607187 RASSF7Q02833 373 aa12.84□□□□□ -0.35
CTSA-215ENST00000607187 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
CTSA-215ENST00000607187 C7orf43Q8WVR3 580 aa12.84□□□□□ -0.35
CTSA-215ENST00000607187 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
CTSA-215ENST00000607187 NFKBIEO00221 500 aa12.83□□□□□ -0.36
CTSA-215ENST00000607187 LMNB1P20700 586 aa12.83□□□□□ -0.36
CTSA-215ENST00000607187 HOXA10P31260 410 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms