RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 SYNE4Q8N205 404 aa11.8□□□□□ -0.52
SRGAP2D-201ENST00000605551 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
SRGAP2D-201ENST00000605551 PSMD1Q99460 953 aa11.8□□□□□ -0.52
SRGAP2D-201ENST00000605551 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
SRGAP2D-201ENST00000605551 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
SRGAP2D-201ENST00000605551 POTECB2RU33 542 aa11.79□□□□□ -0.52
SRGAP2D-201ENST00000605551 PPEF1O14829 653 aaPredicted RBP11.79□□□□□ -0.52
SRGAP2D-201ENST00000605551 GPC2Q8N158 579 aa11.79□□□□□ -0.52
SRGAP2D-201ENST00000605551 LARGE2Q8N3Y3 721 aa11.79□□□□□ -0.52
SRGAP2D-201ENST00000605551 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
SRGAP2D-201ENST00000605551 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 EPHX2P34913 555 aa11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 TMPOP42166 694 aaKnown RBP11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 ZNF34Q8IZ26 560 aa11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 CRAMP1Q96RY5 1269 aa11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 TAF1DQ9H5J8 278 aaPredicted RBP11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 ZNF541Q9H0D2 1346 aa11.78□□□□□ -0.52
SRGAP2D-201ENST00000605551 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.52
SRGAP2D-201ENST00000605551 NTSR2O95665 410 aa11.77□□□□□ -0.53
SRGAP2D-201ENST00000605551 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
SRGAP2D-201ENST00000605551 SUSD4Q5VX71 490 aa11.77□□□□□ -0.53
SRGAP2D-201ENST00000605551 RUNDC1Q96C34 613 aa11.77□□□□□ -0.53
SRGAP2D-201ENST00000605551 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.53
SRGAP2D-201ENST00000605551 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
SRGAP2D-201ENST00000605551 FZD9O00144 591 aa11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 TCERG1O14776 1098 aaKnown RBP11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 HSPA1AP0DMV8 641 aaKnown RBP11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 HSPA1BP0DMV9 641 aaKnown RBP11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 AIMP1Q12904 312 aaKnown RBP11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 OLFM4Q6UX06 510 aa11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
SRGAP2D-201ENST00000605551 TMEM88BA6NKF7 163 aa11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 PPIP5K2O43314 1243 aa11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 HOXB7P09629 217 aa11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 CCDC146Q8IYE0 955 aa11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 VPS33BQ9H267 617 aa11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRGAP2D-201ENST00000605551 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 HDGFL1Q5TGJ6 251 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 COPS6Q7L5N1 327 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 XAGE3Q8WTP9 111 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 CHMP4AQ9BY43 222 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
SRGAP2D-201ENST00000605551 ABCC4O15439 1325 aa11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 BBOX1O75936 387 aa11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 ANXA1P04083 346 aa11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 HSP90B1P14625 803 aaKnown RBP11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 CNTNAP1P78357 1384 aa11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 DPP8Q6V1X1 898 aaPredicted RBP11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 PASKQ96RG2 1323 aa11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 DBF4Q9UBU7 674 aaPredicted RBP11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 ATP6V0A2Q9Y487 856 aa11.73□□□□□ -0.53
SRGAP2D-201ENST00000605551 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
SRGAP2D-201ENST00000605551 PDIA6Q15084 440 aa11.72□□□□□ -0.53
SRGAP2D-201ENST00000605551 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
SRGAP2D-201ENST00000605551 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
SRGAP2D-201ENST00000605551 NLRP10Q86W26 655 aa11.72□□□□□ -0.53
SRGAP2D-201ENST00000605551 CNTROBQ8N137 903 aa11.72□□□□□ -0.53
SRGAP2D-201ENST00000605551 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
SRGAP2D-201ENST00000605551 SNED1Q8TER0 1413 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 CHL1O00533 1208 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 GRAPQ13588 217 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 COL13A1Q5TAT6 717 aaPredicted RBP11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 MAP1SQ66K74 1059 aaPredicted RBP11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 USP50Q70EL3 339 aaPredicted RBP11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 SP8Q8IXZ3 490 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 MPNDQ8N594 471 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 PLBD2Q8NHP8 589 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
SRGAP2D-201ENST00000605551 LAMB2P55268 1798 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 ADAMTSL1Q8N6G6 1762 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 CDHR2Q9BYE9 1310 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 HCLS1P14317 486 aaPredicted RBP11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 TNIP1Q15025 636 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 AOC3Q16853 763 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 ANKRD13DQ6ZTN6 518 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 LRP10Q7Z4F1 713 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 CFAP44Q96MT7 982 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 ZNRF3Q9ULT6 936 aa11.7□□□□□ -0.54
SRGAP2D-201ENST00000605551 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
SRGAP2D-201ENST00000605551 GNAI1P63096 354 aa11.69□□□□□ -0.54
SRGAP2D-201ENST00000605551 DEFB115Q30KQ5 88 aa11.69□□□□□ -0.54
SRGAP2D-201ENST00000605551 CIAPIN1Q6FI81 312 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms