RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 ITGBL1O95965 494 aaPredicted RBP23.44■■□□□ 1.34
CCDC12-212ENST00000605358 PARP10Q53GL7 1025 aa23.44■■□□□ 1.34
CCDC12-212ENST00000605358 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
CCDC12-212ENST00000605358 PPP1R42Q7Z4L9 355 aa23.44■■□□□ 1.34
CCDC12-212ENST00000605358 OLFM4Q6UX06 510 aa23.43■■□□□ 1.34
CCDC12-212ENST00000605358 NUTM1Q86Y26 1132 aa23.43■■□□□ 1.34
CCDC12-212ENST00000605358 RBM17Q96I25 401 aaKnown RBP23.43■■□□□ 1.34
CCDC12-212ENST00000605358 ABCC12Q96J65 1359 aa23.42■■□□□ 1.34
CCDC12-212ENST00000605358 MYL6BP14649 208 aa23.42■■□□□ 1.34
CCDC12-212ENST00000605358 EAPPQ56P03 285 aaPredicted RBP23.42■■□□□ 1.34
CCDC12-212ENST00000605358 VPS33BQ9H267 617 aa23.42■■□□□ 1.34
CCDC12-212ENST00000605358 MKRN1Q9UHC7 482 aaKnown RBP23.42■■□□□ 1.34
CCDC12-212ENST00000605358 ADAMTSL1Q8N6G6 1762 aa23.42■■□□□ 1.34
CCDC12-212ENST00000605358 UBN2Q6ZU65 1347 aa23.41■■□□□ 1.34
CCDC12-212ENST00000605358 EIF6P56537 245 aaKnown RBP23.41■■□□□ 1.34
CCDC12-212ENST00000605358 SUSD4Q5VX71 490 aa23.41■■□□□ 1.34
CCDC12-212ENST00000605358 CLEC11AQ9Y240 323 aa23.41■■□□□ 1.34
CCDC12-212ENST00000605358 RNF123Q5XPI4 1314 aa23.4■■□□□ 1.34
CCDC12-212ENST00000605358 TMX4Q9H1E5 349 aaPredicted RBP23.4■■□□□ 1.34
CCDC12-212ENST00000605358 ZBTB3Q9H5J0 574 aa23.4■■□□□ 1.34
CCDC12-212ENST00000605358 TSPYL4Q9UJ04 414 aa23.4■■□□□ 1.34
CCDC12-212ENST00000605358 NTSR2O95665 410 aa23.39■■□□□ 1.33
CCDC12-212ENST00000605358 GPTP24298 496 aa23.39■■□□□ 1.33
CCDC12-212ENST00000605358 LMOD3Q0VAK6 560 aa23.39■■□□□ 1.33
CCDC12-212ENST00000605358 SLC10A5Q5PT55 438 aa23.39■■□□□ 1.33
CCDC12-212ENST00000605358 NLRP3Q96P20 1036 aa23.39■■□□□ 1.33
CCDC12-212ENST00000605358 THUMPD2Q9BTF0 503 aaKnown RBP23.39■■□□□ 1.33
CCDC12-212ENST00000605358 RALBP1Q15311 655 aa23.38■■□□□ 1.33
CCDC12-212ENST00000605358 CNTROBQ8N137 903 aa23.38■■□□□ 1.33
CCDC12-212ENST00000605358 LMOD1P29536 600 aaPredicted RBP23.37■■□□□ 1.33
CCDC12-212ENST00000605358 PPEF1O14829 653 aaPredicted RBP23.36■■□□□ 1.33
CCDC12-212ENST00000605358 RIPK4P57078 832 aa23.36■■□□□ 1.33
CCDC12-212ENST00000605358 HSP90AB3PQ58FF7 597 aa23.36■■□□□ 1.33
CCDC12-212ENST00000605358 LRP10Q7Z4F1 713 aa23.36■■□□□ 1.33
CCDC12-212ENST00000605358 LARGE2Q8N3Y3 721 aa23.36■■□□□ 1.33
CCDC12-212ENST00000605358 UTP14AQ9BVJ6 771 aaKnown RBP23.36■■□□□ 1.33
CCDC12-212ENST00000605358 PRDM10Q9NQV6 1147 aa23.36■■□□□ 1.33
CCDC12-212ENST00000605358 RASSF10A6NK89 507 aa23.35■■□□□ 1.33
CCDC12-212ENST00000605358 PDIA6Q15084 440 aa23.35■■□□□ 1.33
CCDC12-212ENST00000605358 VEGFBP49765 207 aa23.34■■□□□ 1.33
CCDC12-212ENST00000605358 SUPT20HQ8NEM7 779 aa23.34■■□□□ 1.33
CCDC12-212ENST00000605358 AIDAQ96BJ3 306 aa23.34■■□□□ 1.33
CCDC12-212ENST00000605358 ATP6V0A2Q9Y487 856 aa23.34■■□□□ 1.33
CCDC12-212ENST00000605358 BBOX1O75936 387 aa23.33■■□□□ 1.33
CCDC12-212ENST00000605358 DEFB115Q30KQ5 88 aa23.33■■□□□ 1.33
CCDC12-212ENST00000605358 USP50Q70EL3 339 aaPredicted RBP23.33■■□□□ 1.33
CCDC12-212ENST00000605358 CTCFP49711 727 aaPredicted RBP23.32■■□□□ 1.32
CCDC12-212ENST00000605358 MAP1SQ66K74 1059 aaPredicted RBP23.32■■□□□ 1.32
CCDC12-212ENST00000605358 NIM1KQ8IY84 436 aa23.32■■□□□ 1.32
CCDC12-212ENST00000605358 GJA3Q9Y6H8 435 aa23.32■■□□□ 1.32
CCDC12-212ENST00000605358 EIF2S2P20042 333 aaKnown RBP23.31■■□□□ 1.32
CCDC12-212ENST00000605358 TMPOP42166 694 aaKnown RBP23.31■■□□□ 1.32
CCDC12-212ENST00000605358 RTFDC1Q9BY42 306 aaPredicted RBP23.31■■□□□ 1.32
CCDC12-212ENST00000605358 FOXN1O15353 648 aa23.3■■□□□ 1.32
CCDC12-212ENST00000605358 SCNN1DP51172 638 aa23.3■■□□□ 1.32
CCDC12-212ENST00000605358 DDX21Q9NR30 783 aaKnown RBP eCLIP23.3■■□□□ 1.32
CCDC12-212ENST00000605358 WBP1LQ9NX94 342 aa23.3■■□□□ 1.32
CCDC12-212ENST00000605358 COL4A5P29400 1685 aa23.29■■□□□ 1.32
CCDC12-212ENST00000605358 CAPN15O75808 1086 aa23.29■■□□□ 1.32
CCDC12-212ENST00000605358 SP8Q8IXZ3 490 aa23.29■■□□□ 1.32
CCDC12-212ENST00000605358 PPIP5K2O43314 1243 aa23.28■■□□□ 1.32
CCDC12-212ENST00000605358 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
CCDC12-212ENST00000605358 C3orf67Q6ZVT6 689 aa23.28■■□□□ 1.32
CCDC12-212ENST00000605358 TMC4Q7Z404 712 aa23.28■■□□□ 1.32
CCDC12-212ENST00000605358 ANKRD36CQ5JPF3 1778 aa23.27■■□□□ 1.32
CCDC12-212ENST00000605358 EPS15P42566 896 aa23.27■■□□□ 1.32
CCDC12-212ENST00000605358 TCIRG1Q13488 830 aa23.27■■□□□ 1.32
CCDC12-212ENST00000605358 COPS6Q7L5N1 327 aa23.27■■□□□ 1.32
CCDC12-212ENST00000605358 NLRP10Q86W26 655 aa23.27■■□□□ 1.32
CCDC12-212ENST00000605358 ZNRF3Q9ULT6 936 aa23.27■■□□□ 1.32
CCDC12-212ENST00000605358 LTBP1Q14766 1721 aa23.26■■□□□ 1.31
CCDC12-212ENST00000605358 CHL1O00533 1208 aa23.26■■□□□ 1.31
CCDC12-212ENST00000605358 PROSER3Q2NL68 480 aa23.26■■□□□ 1.31
CCDC12-212ENST00000605358 ADARB2Q9NS39 739 aaKnown RBP23.26■■□□□ 1.31
CCDC12-212ENST00000605358 ABCC4O15439 1325 aa23.26■■□□□ 1.31
CCDC12-212ENST00000605358 CDHR2Q9BYE9 1310 aa23.26■■□□□ 1.31
CCDC12-212ENST00000605358 WDR33Q9C0J8 1336 aaKnown RBP23.26■■□□□ 1.31
CCDC12-212ENST00000605358 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
CCDC12-212ENST00000605358 HOXB7P09629 217 aa23.25■■□□□ 1.31
CCDC12-212ENST00000605358 DDX46Q7L014 1031 aaKnown RBP23.25■■□□□ 1.31
CCDC12-212ENST00000605358 GPRC5DQ9NZD1 345 aa23.25■■□□□ 1.31
CCDC12-212ENST00000605358 ABT1Q9ULW3 272 aaKnown RBP23.25■■□□□ 1.31
CCDC12-212ENST00000605358 SH3TC1Q8TE82 1336 aa23.25■■□□□ 1.31
CCDC12-212ENST00000605358 ECE1P42892 770 aa23.24■■□□□ 1.31
CCDC12-212ENST00000605358 AOC3Q16853 763 aa23.24■■□□□ 1.31
CCDC12-212ENST00000605358 DPP8Q6V1X1 898 aaPredicted RBP23.24■■□□□ 1.31
CCDC12-212ENST00000605358 MPNDQ8N594 471 aa23.24■■□□□ 1.31
CCDC12-212ENST00000605358 XAGE3Q8WTP9 111 aa23.24■■□□□ 1.31
CCDC12-212ENST00000605358 TRMT112Q9UI30 125 aaKnown RBP23.24■■□□□ 1.31
CCDC12-212ENST00000605358 KIAA2012Q0VF49 1180 aa23.23■■□□□ 1.31
CCDC12-212ENST00000605358 TRPM7Q96QT4 1865 aa23.23■■□□□ 1.31
CCDC12-212ENST00000605358 ANXA1P04083 346 aa23.22■■□□□ 1.31
CCDC12-212ENST00000605358 CXCL9Q07325 125 aa23.22■■□□□ 1.31
CCDC12-212ENST00000605358 AIMP1Q12904 312 aaKnown RBP23.22■■□□□ 1.31
CCDC12-212ENST00000605358 GRAPQ13588 217 aa23.22■■□□□ 1.31
CCDC12-212ENST00000605358 TNIP1Q15025 636 aa23.22■■□□□ 1.31
CCDC12-212ENST00000605358 GRAPLQ8TC17 118 aaPredicted RBP23.22■■□□□ 1.31
CCDC12-212ENST00000605358 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
CCDC12-212ENST00000605358 ZC3H15Q8WU90 426 aaKnown RBP23.21■■□□□ 1.31
CCDC12-212ENST00000605358 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms