RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
SRGAP2-210ENST00000604419 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
SRGAP2-210ENST00000604419 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
SRGAP2-210ENST00000604419 TMX4Q9H1E5 349 aaPredicted RBP12.78□□□□□ -0.36
SRGAP2-210ENST00000604419 IBTKQ9P2D0 1353 aaPredicted RBP12.78□□□□□ -0.36
SRGAP2-210ENST00000604419 RIC1Q4ADV7 1423 aa12.78□□□□□ -0.36
SRGAP2-210ENST00000604419 CACNA1SQ13698 1873 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 MYL6BP14649 208 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 PARP10Q53GL7 1025 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 SUSD4Q5VX71 490 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 TTLL7Q6ZT98 887 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 VPS33BQ9H267 617 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 MAPK8IP3Q9UPT6 1336 aa12.77□□□□□ -0.37
SRGAP2-210ENST00000604419 LMOD1P29536 600 aaPredicted RBP12.76□□□□□ -0.37
SRGAP2-210ENST00000604419 VEGFBP49765 207 aa12.76□□□□□ -0.37
SRGAP2-210ENST00000604419 NLRP3Q96P20 1036 aa12.76□□□□□ -0.37
SRGAP2-210ENST00000604419 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
SRGAP2-210ENST00000604419 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
SRGAP2-210ENST00000604419 RNF123Q5XPI4 1314 aa12.76□□□□□ -0.37
SRGAP2-210ENST00000604419 GPTP24298 496 aa12.75□□□□□ -0.37
SRGAP2-210ENST00000604419 CTCFP49711 727 aaPredicted RBP12.75□□□□□ -0.37
SRGAP2-210ENST00000604419 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
SRGAP2-210ENST00000604419 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
SRGAP2-210ENST00000604419 LARGE2Q8N3Y3 721 aa12.75□□□□□ -0.37
SRGAP2-210ENST00000604419 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
SRGAP2-210ENST00000604419 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
SRGAP2-210ENST00000604419 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 UBN2Q6ZU65 1347 aa12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 NTSR2O95665 410 aa12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 MAP1SQ66K74 1059 aaPredicted RBP12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 THUMPD2Q9BTF0 503 aaKnown RBP12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 TSPYL4Q9UJ04 414 aa12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 LAMB4A4D0S4 1761 aa12.74□□□□□ -0.37
SRGAP2-210ENST00000604419 FOXN1O15353 648 aa12.73□□□□□ -0.37
SRGAP2-210ENST00000604419 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
SRGAP2-210ENST00000604419 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
SRGAP2-210ENST00000604419 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
SRGAP2-210ENST00000604419 UTP14AQ9BVJ6 771 aaKnown RBP12.73□□□□□ -0.37
SRGAP2-210ENST00000604419 ATP6V0A2Q9Y487 856 aa12.73□□□□□ -0.37
SRGAP2-210ENST00000604419 NUP98P52948 1817 aa12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 KDM3BQ7LBC6 1761 aa12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 BBOX1O75936 387 aa12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 RIPK4P57078 832 aa12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
SRGAP2-210ENST00000604419 PDIA6Q15084 440 aa12.71□□□□□ -0.37
SRGAP2-210ENST00000604419 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.37
SRGAP2-210ENST00000604419 ABT1Q9ULW3 272 aaKnown RBP12.71□□□□□ -0.37
SRGAP2-210ENST00000604419 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.38
SRGAP2-210ENST00000604419 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 PPIP5K2O43314 1243 aa12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 EPS15P42566 896 aa12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 SCNN1DP51172 638 aa12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 RALBP1Q15311 655 aa12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 SP8Q8IXZ3 490 aa12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 RTFDC1Q9BY42 306 aaPredicted RBP12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 ADARB2Q9NS39 739 aaKnown RBP12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
SRGAP2-210ENST00000604419 ECE1P42892 770 aa12.69□□□□□ -0.38
SRGAP2-210ENST00000604419 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
SRGAP2-210ENST00000604419 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
SRGAP2-210ENST00000604419 TMPOP42166 694 aaKnown RBP12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 LBX1P52954 281 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 TNIP1Q15025 636 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 AOC3Q16853 763 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 DPP8Q6V1X1 898 aaPredicted RBP12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 TMC4Q7Z404 712 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 MPNDQ8N594 471 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 GPRC5DQ9NZD1 345 aa12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 TRMT112Q9UI30 125 aaKnown RBP12.68□□□□□ -0.38
SRGAP2-210ENST00000604419 ABCC4O15439 1325 aa12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 CXCL9Q07325 125 aa12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 ZC3H15Q8WU90 426 aaKnown RBP12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 PGAP2Q9UHJ9 254 aa12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 COL4A5P29400 1685 aa12.67□□□□□ -0.38
SRGAP2-210ENST00000604419 SH3TC1Q8TE82 1336 aa12.66□□□□□ -0.38
SRGAP2-210ENST00000604419 CHL1O00533 1208 aa12.66□□□□□ -0.38
SRGAP2-210ENST00000604419 MAP2K2P36507 400 aa12.66□□□□□ -0.38
SRGAP2-210ENST00000604419 KIAA2012Q0VF49 1180 aa12.66□□□□□ -0.38
SRGAP2-210ENST00000604419 AIMP1Q12904 312 aaKnown RBP12.66□□□□□ -0.38
SRGAP2-210ENST00000604419 CST9Q5W186 159 aa12.66□□□□□ -0.38
SRGAP2-210ENST00000604419 CIAPIN1Q6FI81 312 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms