RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 MCM5P33992 734 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 IGBP1P78318 339 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 ARMC3Q5W041 872 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 ICE2Q659A1 982 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 CTR9Q6PD62 1173 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 FEZ1Q99689 392 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 RSPH14Q9UHP6 348 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 ZKSCAN5Q9Y2L8 839 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 ZPR1O75312 459 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 HMGN5P82970 282 aaKnown RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 RIC3Q7Z5B4 369 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 NGDNQ8NEJ9 315 aaKnown RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 ZNF516Q92618 1163 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 JARID2Q92833 1246 aaPredicted RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 PRIMPOLQ96LW4 560 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 OGFRQ9NZT2 677 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 NOP2P46087 812 aaKnown RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 KCNC4Q03721 635 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 TCEAL1Q15170 157 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 SH3D19Q5HYK7 790 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 C1QTNF12Q5T7M4 302 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 CCDC70Q6NSX1 233 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 RSBN1LQ6PCB5 846 aaPredicted RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 RAVER1Q8IY67 606 aaKnown RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 STAG1Q8WVM7 1258 aa5.66□□□□□ -1.5
LINC01109-201ENST00000603837 PRKRIP1Q9H875 184 aaPredicted RBP5.66□□□□□ -1.5
LINC01109-201ENST00000603837 ARAP3Q8WWN8 1544 aa5.65□□□□□ -1.5
LINC01109-201ENST00000603837 UACAQ9BZF9 1416 aa5.65□□□□□ -1.5
LINC01109-201ENST00000603837 CNTLNQ9NXG0 1405 aa5.65□□□□□ -1.5
LINC01109-201ENST00000603837 NCOA2Q15596 1464 aa5.65□□□□□ -1.5
LINC01109-201ENST00000603837 ITGBL1O95965 494 aaPredicted RBP5.65□□□□□ -1.5
LINC01109-201ENST00000603837 GTF2F1P35269 517 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC01109-201ENST00000603837 CLK2P49760 499 aaKnown RBP5.65□□□□□ -1.5
LINC01109-201ENST00000603837 C10orf62Q5T681 223 aaPredicted RBP5.65□□□□□ -1.5
LINC01109-201ENST00000603837 FMNL3Q8IVF7 1028 aa5.65□□□□□ -1.5
LINC01109-201ENST00000603837 TSR2Q969E8 191 aaKnown RBP5.65□□□□□ -1.5
LINC01109-201ENST00000603837 INO80BQ9C086 356 aaPredicted RBP5.65□□□□□ -1.5
LINC01109-201ENST00000603837 SFMBT1Q9UHJ3 866 aa5.65□□□□□ -1.5
LINC01109-201ENST00000603837 FMN1Q68DA7 1419 aa5.65□□□□□ -1.5
LINC01109-201ENST00000603837 MTUS2Q5JR59 1369 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 SPTLC1O15269 473 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 TGFB3P10600 412 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 KANK3Q6NY19 840 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 ARPC5LQ9BPX5 153 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 CHMP5Q9NZZ3 219 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 DMGDHQ9UI17 866 aaKnown RBP5.65□□□□□ -1.51
LINC01109-201ENST00000603837 PTPRKQ15262 1439 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 CARMIL2Q6F5E8 1435 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 KIF16BQ96L93 1317 aa5.65□□□□□ -1.51
LINC01109-201ENST00000603837 ZRANB2O95218 330 aaKnown RBP eCLIP5.64□□□□□ -1.51
LINC01109-201ENST00000603837 GJA5P36382 358 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 Q3C1V9 767 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 LMBRD2Q68DH5 695 aaPredicted RBP5.64□□□□□ -1.51
LINC01109-201ENST00000603837 PAGR1Q9BTK6 254 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 TMX1Q9H3N1 280 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 RMI1Q9H9A7 625 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 BRMS1Q9HCU9 246 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 LIMD1Q9UGP4 676 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 PCDHGC3Q9UN70 934 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 SMC3Q9UQE7 1217 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 TNNT1P13805 278 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 ZC3H6P61129 1189 aaKnown RBP5.64□□□□□ -1.51
LINC01109-201ENST00000603837 SETDB1Q15047 1291 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 HDGFL1Q5TGJ6 251 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 SLC26A8Q96RN1 970 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 BCL2L13Q9BXK5 485 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 GOPCQ9HD26 462 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 DONSONQ9NYP3 566 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 RCAN3Q9UKA8 241 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 NAIPQ13075 1403 aa5.64□□□□□ -1.51
LINC01109-201ENST00000603837 GUCY2CP25092 1073 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 ABL2P42684 1182 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 TOMM20Q15388 145 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 RBM28Q9NW13 759 aaKnown RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 PCDHB15Q9Y5E8 787 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 CCDC18Q5T9S5 1454 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 VIRMAQ69YN4 1812 aaKnown RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 REREQ9P2R6 1566 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 PRG4Q92954 1404 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 ABCA9Q8IUA7 1624 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 C6orf229H3BNL8 230 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 TLL1O43897 1013 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 FMNL1O95466 1100 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 COPB2P35606 906 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 TERF2Q15554 542 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 ZKSCAN8Q15776 578 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 SKOR2Q2VWA4 1001 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 RNF19BQ6ZMZ0 732 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 CENPQQ7L2Z9 268 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 SYMPKQ92797 1274 aaKnown RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 ZNF512BQ96KM6 892 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 RSPH9Q9H1X1 276 aaPredicted RBP5.63□□□□□ -1.51
LINC01109-201ENST00000603837 RASSF4Q9H2L5 321 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 CHIC2Q9UKJ5 165 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 IQSEC2Q5JU85 1478 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 USP19O94966 1318 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 KIAA0556O60303 1618 aa5.63□□□□□ -1.51
LINC01109-201ENST00000603837 FAM177BA6PVY3 158 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms