RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 POTEJP0CG39 1038 aa27.73■■■□□ 2.03
PPFIA3-209ENST00000602783 HOXA10P31260 410 aaPredicted RBP27.73■■■□□ 2.03
PPFIA3-209ENST00000602783 IARSP41252 1262 aaKnown RBP27.73■■■□□ 2.03
PPFIA3-209ENST00000602783 PARP10Q53GL7 1025 aa27.73■■■□□ 2.03
PPFIA3-209ENST00000602783 CHADLQ6NUI6 762 aa27.73■■■□□ 2.03
PPFIA3-209ENST00000602783 LAS1LQ9Y4W2 734 aaKnown RBP27.73■■■□□ 2.03
PPFIA3-209ENST00000602783 IQCA1LA6NCM1 817 aa27.72■■■□□ 2.03
PPFIA3-209ENST00000602783 RBM17Q96I25 401 aaKnown RBP27.72■■■□□ 2.03
PPFIA3-209ENST00000602783 L3MBTL3Q96JM7 780 aaPredicted RBP27.72■■■□□ 2.03
PPFIA3-209ENST00000602783 ADAMTS8Q9UP79 889 aa27.72■■■□□ 2.03
PPFIA3-209ENST00000602783 ZNF541Q9H0D2 1346 aa27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 CHL1O00533 1208 aa27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 AIMP1Q12904 312 aaKnown RBP27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 RIC1Q4ADV7 1423 aa27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 CC2D2BQ6DHV5 1058 aa27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 COPS6Q7L5N1 327 aa27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 PSMD1Q99460 953 aa27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 TRIM35Q9UPQ4 493 aa27.71■■■□□ 2.03
PPFIA3-209ENST00000602783 KRT24Q2M2I5 525 aa27.7■■■□□ 2.02
PPFIA3-209ENST00000602783 C3orf67Q6ZVT6 689 aa27.7■■■□□ 2.02
PPFIA3-209ENST00000602783 CRAMP1Q96RY5 1269 aa27.7■■■□□ 2.02
PPFIA3-209ENST00000602783 UTP14AQ9BVJ6 771 aaKnown RBP27.7■■■□□ 2.02
PPFIA3-209ENST00000602783 TCERG1O14776 1098 aaKnown RBP27.69■■■□□ 2.02
PPFIA3-209ENST00000602783 XAGE3Q8WTP9 111 aa27.69■■■□□ 2.02
PPFIA3-209ENST00000602783 NLRP3Q96P20 1036 aa27.69■■■□□ 2.02
PPFIA3-209ENST00000602783 TAF1DQ9H5J8 278 aaPredicted RBP27.69■■■□□ 2.02
PPFIA3-209ENST00000602783 FZD9O00144 591 aa27.68■■■□□ 2.02
PPFIA3-209ENST00000602783 JDP2Q8WYK2 163 aa27.68■■■□□ 2.02
PPFIA3-209ENST00000602783 DDX21Q9NR30 783 aaKnown RBP eCLIP27.67■■■□□ 2.02
PPFIA3-209ENST00000602783 SNED1Q8TER0 1413 aa27.67■■■□□ 2.02
PPFIA3-209ENST00000602783 PPEF1O14829 653 aaPredicted RBP27.66■■■□□ 2.02
PPFIA3-209ENST00000602783 HSP90AB3PQ58FF7 597 aa27.66■■■□□ 2.02
PPFIA3-209ENST00000602783 SLC10A5Q5PT55 438 aa27.66■■■□□ 2.02
PPFIA3-209ENST00000602783 GRIPAP1Q4V328 841 aa27.65■■■□□ 2.02
PPFIA3-209ENST00000602783 SLC51AQ86UW1 340 aa27.65■■■□□ 2.02
PPFIA3-209ENST00000602783 LDHDQ86WU2 507 aa27.65■■■□□ 2.02
PPFIA3-209ENST00000602783 HACL1Q9UJ83 578 aa27.65■■■□□ 2.02
PPFIA3-209ENST00000602783 SCN4AP35499 1836 aa27.64■■■□□ 2.02
PPFIA3-209ENST00000602783 EAPPQ56P03 285 aaPredicted RBP27.64■■■□□ 2.02
PPFIA3-209ENST00000602783 TCIRG1Q13488 830 aa27.63■■■□□ 2.01
PPFIA3-209ENST00000602783 NLRP10Q86W26 655 aa27.63■■■□□ 2.01
PPFIA3-209ENST00000602783 GPC2Q8N158 579 aa27.62■■■□□ 2.01
PPFIA3-209ENST00000602783 TMX4Q9H1E5 349 aaPredicted RBP27.62■■■□□ 2.01
PPFIA3-209ENST00000602783 CHPF2Q9P2E5 772 aa27.62■■■□□ 2.01
PPFIA3-209ENST00000602783 ANKRD36CQ5JPF3 1778 aa27.62■■■□□ 2.01
PPFIA3-209ENST00000602783 RNF123Q5XPI4 1314 aa27.62■■■□□ 2.01
PPFIA3-209ENST00000602783 EPHX2P34913 555 aa27.61■■■□□ 2.01
PPFIA3-209ENST00000602783 EIF6P56537 245 aaKnown RBP27.61■■■□□ 2.01
PPFIA3-209ENST00000602783 HDGFL1Q5TGJ6 251 aa27.61■■■□□ 2.01
PPFIA3-209ENST00000602783 LARGE2Q8N3Y3 721 aa27.61■■■□□ 2.01
PPFIA3-209ENST00000602783 CREBZFQ9NS37 354 aa27.61■■■□□ 2.01
PPFIA3-209ENST00000602783 CLEC11AQ9Y240 323 aa27.61■■■□□ 2.01
PPFIA3-209ENST00000602783 PCNTO95613 3336 aa27.61■■■□□ 2.01
PPFIA3-209ENST00000602783 HCLS1P14317 486 aaPredicted RBP27.6■■■□□ 2.01
PPFIA3-209ENST00000602783 TRMT112Q9UI30 125 aaKnown RBP27.6■■■□□ 2.01
PPFIA3-209ENST00000602783 GJA3Q9Y6H8 435 aa27.6■■■□□ 2.01
PPFIA3-209ENST00000602783 CFAP44Q96MT7 982 aa27.59■■■□□ 2.01
PPFIA3-209ENST00000602783 ATP6V0A2Q9Y487 856 aa27.59■■■□□ 2.01
PPFIA3-209ENST00000602783 HOXB7P09629 217 aa27.58■■■□□ 2.01
PPFIA3-209ENST00000602783 PNMA8AQ86V59 439 aaPredicted RBP27.58■■■□□ 2.01
PPFIA3-209ENST00000602783 ZNF428Q96B54 188 aa27.58■■■□□ 2.01
PPFIA3-209ENST00000602783 ABCC4O15439 1325 aa27.58■■■□□ 2.01
PPFIA3-209ENST00000602783 COL4A5P29400 1685 aa27.57■■■□□ 2
PPFIA3-209ENST00000602783 DBF4Q9UBU7 674 aaPredicted RBP27.57■■■□□ 2
PPFIA3-209ENST00000602783 PASKQ96RG2 1323 aa27.57■■■□□ 2
PPFIA3-209ENST00000602783 ITGBL1O95965 494 aaPredicted RBP27.56■■■□□ 2
PPFIA3-209ENST00000602783 DUSP27Q5VZP5 1158 aa27.56■■■□□ 2
PPFIA3-209ENST00000602783 ANKRD13DQ6ZTN6 518 aa27.56■■■□□ 2
PPFIA3-209ENST00000602783 PLBD2Q8NHP8 589 aa27.56■■■□□ 2
PPFIA3-209ENST00000602783 MBIPQ9NS73 344 aa27.56■■■□□ 2
PPFIA3-209ENST00000602783 MKRN1Q9UHC7 482 aaKnown RBP27.56■■■□□ 2
PPFIA3-209ENST00000602783 SH3TC1Q8TE82 1336 aa27.56■■■□□ 2
PPFIA3-209ENST00000602783 APAF1O14727 1248 aa27.55■■■□□ 2
PPFIA3-209ENST00000602783 PPIP5K2O43314 1243 aa27.55■■■□□ 2
PPFIA3-209ENST00000602783 BBOX1O75936 387 aa27.55■■■□□ 2
PPFIA3-209ENST00000602783 COL13A1Q5TAT6 717 aaPredicted RBP27.55■■■□□ 2
PPFIA3-209ENST00000602783 NIM1KQ8IY84 436 aa27.55■■■□□ 2
PPFIA3-209ENST00000602783 DDX46Q7L014 1031 aaKnown RBP27.54■■■□□ 2
PPFIA3-209ENST00000602783 HSPA1AP0DMV8 641 aaKnown RBP27.53■■■□□ 2
PPFIA3-209ENST00000602783 HSPA1BP0DMV9 641 aaKnown RBP27.53■■■□□ 2
PPFIA3-209ENST00000602783 LMOD1P29536 600 aaPredicted RBP27.53■■■□□ 2
PPFIA3-209ENST00000602783 AOC3Q16853 763 aa27.53■■■□□ 2
PPFIA3-209ENST00000602783 SP8Q8IXZ3 490 aa27.53■■■□□ 2
PPFIA3-209ENST00000602783 ZNF316A6NFI3 1004 aaPredicted RBP27.52■■■□□ 2
PPFIA3-209ENST00000602783 CCDC184Q52MB2 194 aa27.52■■■□□ 2
PPFIA3-209ENST00000602783 MAP1SQ66K74 1059 aaPredicted RBP27.52■■■□□ 2
PPFIA3-209ENST00000602783 CNTROBQ8N137 903 aa27.52■■■□□ 2
PPFIA3-209ENST00000602783 SUPT20HQ8NEM7 779 aa27.52■■■□□ 2
PPFIA3-209ENST00000602783 VPS33BQ9H267 617 aa27.52■■■□□ 2
PPFIA3-209ENST00000602783 HYPKQ9NX55 129 aa27.52■■■□□ 2
PPFIA3-209ENST00000602783 ATP5J2-PTCD1G3V325 749 aa27.51■■□□□ 1.99
PPFIA3-209ENST00000602783 ZNF853P0CG23 659 aa27.51■■□□□ 1.99
PPFIA3-209ENST00000602783 DPP8Q6V1X1 898 aaPredicted RBP27.51■■□□□ 1.99
PPFIA3-209ENST00000602783 MPNDQ8N594 471 aa27.51■■□□□ 1.99
PPFIA3-209ENST00000602783 TMEM88BA6NKF7 163 aa27.5■■□□□ 1.99
PPFIA3-209ENST00000602783 EPS15P42566 896 aa27.5■■□□□ 1.99
PPFIA3-209ENST00000602783 SCNN1DP51172 638 aa27.5■■□□□ 1.99
PPFIA3-209ENST00000602783 GRAPQ13588 217 aa27.5■■□□□ 1.99
PPFIA3-209ENST00000602783 GRAPLQ8TC17 118 aaPredicted RBP27.5■■□□□ 1.99
PPFIA3-209ENST00000602783 ISCA1Q9BUE6 129 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms