RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 DDX60Q8IY21 1712 aaKnown RBP28.4■■■□□ 2.14
UBE2E3-206ENST00000602479 HOXA10P31260 410 aaPredicted RBP28.39■■■□□ 2.14
UBE2E3-206ENST00000602479 HTRA3P83110 453 aa28.39■■■□□ 2.14
UBE2E3-206ENST00000602479 ZNF277Q9NRM2 450 aaPredicted RBP28.39■■■□□ 2.14
UBE2E3-206ENST00000602479 LAS1LQ9Y4W2 734 aaKnown RBP28.39■■■□□ 2.14
UBE2E3-206ENST00000602479 TAF1P21675 1872 aa28.38■■■□□ 2.13
UBE2E3-206ENST00000602479 DDNO94850 711 aaPredicted RBP28.38■■■□□ 2.13
UBE2E3-206ENST00000602479 PPP1R42Q7Z4L9 355 aa28.38■■■□□ 2.13
UBE2E3-206ENST00000602479 RPGRQ92834 1020 aaKnown RBP28.38■■■□□ 2.13
UBE2E3-206ENST00000602479 C3orf67Q6ZVT6 689 aa28.37■■■□□ 2.13
UBE2E3-206ENST00000602479 COPS6Q7L5N1 327 aa28.37■■■□□ 2.13
UBE2E3-206ENST00000602479 XAGE3Q8WTP9 111 aa28.37■■■□□ 2.13
UBE2E3-206ENST00000602479 DDX21Q9NR30 783 aaKnown RBP eCLIP28.37■■■□□ 2.13
UBE2E3-206ENST00000602479 COL4A5P29400 1685 aa28.37■■■□□ 2.13
UBE2E3-206ENST00000602479 ADAMTSL1Q8N6G6 1762 aa28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 HOXB7P09629 217 aa28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 AIMP1Q12904 312 aaKnown RBP28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 CFAP44Q96MT7 982 aa28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 PSMD1Q99460 953 aa28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 CHPF2Q9P2E5 772 aa28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 RNF123Q5XPI4 1314 aa28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 ZNF541Q9H0D2 1346 aa28.34■■■□□ 2.13
UBE2E3-206ENST00000602479 IARSP41252 1262 aaKnown RBP28.33■■■□□ 2.13
UBE2E3-206ENST00000602479 L3MBTL3Q96JM7 780 aaPredicted RBP28.33■■■□□ 2.13
UBE2E3-206ENST00000602479 CRAMP1Q96RY5 1269 aa28.33■■■□□ 2.13
UBE2E3-206ENST00000602479 UTP14AQ9BVJ6 771 aaKnown RBP28.33■■■□□ 2.13
UBE2E3-206ENST00000602479 HSP90AB3PQ58FF7 597 aa28.32■■■□□ 2.12
UBE2E3-206ENST00000602479 HDGFL1Q5TGJ6 251 aa28.32■■■□□ 2.12
UBE2E3-206ENST00000602479 CC2D2BQ6DHV5 1058 aa28.32■■■□□ 2.12
UBE2E3-206ENST00000602479 SLC51AQ86UW1 340 aa28.32■■■□□ 2.12
UBE2E3-206ENST00000602479 SYNE4Q8N205 404 aa28.32■■■□□ 2.12
UBE2E3-206ENST00000602479 RBM17Q96I25 401 aaKnown RBP28.32■■■□□ 2.12
UBE2E3-206ENST00000602479 SLC10A5Q5PT55 438 aa28.31■■■□□ 2.12
UBE2E3-206ENST00000602479 NLRP10Q86W26 655 aa28.31■■■□□ 2.12
UBE2E3-206ENST00000602479 KLRG1Q96E93 195 aa28.31■■■□□ 2.12
UBE2E3-206ENST00000602479 LRRC37AA6NMS7 1700 aa28.31■■■□□ 2.12
UBE2E3-206ENST00000602479 NLRP3Q96P20 1036 aa28.3■■■□□ 2.12
UBE2E3-206ENST00000602479 MBIPQ9NS73 344 aa28.3■■■□□ 2.12
UBE2E3-206ENST00000602479 APAF1O14727 1248 aa28.29■■■□□ 2.12
UBE2E3-206ENST00000602479 PPEF1O14829 653 aaPredicted RBP28.29■■■□□ 2.12
UBE2E3-206ENST00000602479 ZNF853P0CG23 659 aa28.29■■■□□ 2.12
UBE2E3-206ENST00000602479 TCIRG1Q13488 830 aa28.29■■■□□ 2.12
UBE2E3-206ENST00000602479 IQCA1LA6NCM1 817 aa28.28■■■□□ 2.12
UBE2E3-206ENST00000602479 FZD9O00144 591 aa28.28■■■□□ 2.12
UBE2E3-206ENST00000602479 POTEIP0CG38 1075 aa28.28■■■□□ 2.12
UBE2E3-206ENST00000602479 POTEJP0CG39 1038 aa28.28■■■□□ 2.12
UBE2E3-206ENST00000602479 LTBP1Q14766 1721 aa28.27■■■□□ 2.12
UBE2E3-206ENST00000602479 DBF4Q9UBU7 674 aaPredicted RBP28.27■■■□□ 2.12
UBE2E3-206ENST00000602479 ABCC4O15439 1325 aa28.26■■■□□ 2.11
UBE2E3-206ENST00000602479 GRIPAP1Q4V328 841 aa28.26■■■□□ 2.11
UBE2E3-206ENST00000602479 DUSP27Q5VZP5 1158 aa28.26■■■□□ 2.11
UBE2E3-206ENST00000602479 CHADLQ6NUI6 762 aa28.26■■■□□ 2.11
UBE2E3-206ENST00000602479 JMYQ8N9B5 988 aa28.25■■■□□ 2.11
UBE2E3-206ENST00000602479 PLBD2Q8NHP8 589 aa28.25■■■□□ 2.11
UBE2E3-206ENST00000602479 TAF1DQ9H5J8 278 aaPredicted RBP28.25■■■□□ 2.11
UBE2E3-206ENST00000602479 IFT57Q9NWB7 429 aa28.25■■■□□ 2.11
UBE2E3-206ENST00000602479 TRMT112Q9UI30 125 aaKnown RBP28.24■■■□□ 2.11
UBE2E3-206ENST00000602479 SH3TC1Q8TE82 1336 aa28.23■■■□□ 2.11
UBE2E3-206ENST00000602479 TCERG1O14776 1098 aaKnown RBP28.23■■■□□ 2.11
UBE2E3-206ENST00000602479 HCLS1P14317 486 aaPredicted RBP28.23■■■□□ 2.11
UBE2E3-206ENST00000602479 JDP2Q8WYK2 163 aa28.23■■■□□ 2.11
UBE2E3-206ENST00000602479 GNAI1P63096 354 aa28.22■■■□□ 2.11
UBE2E3-206ENST00000602479 ANKRD13DQ6ZTN6 518 aa28.22■■■□□ 2.11
UBE2E3-206ENST00000602479 HYPKQ9NX55 129 aa28.22■■■□□ 2.11
UBE2E3-206ENST00000602479 ATP6V0A2Q9Y487 856 aa28.22■■■□□ 2.11
UBE2E3-206ENST00000602479 DUOX1Q9NRD9 1551 aa28.21■■■□□ 2.11
UBE2E3-206ENST00000602479 CALD1Q05682 793 aaKnown RBP28.21■■■□□ 2.11
UBE2E3-206ENST00000602479 CCDC184Q52MB2 194 aa28.21■■■□□ 2.11
UBE2E3-206ENST00000602479 GPC2Q8N158 579 aa28.21■■■□□ 2.11
UBE2E3-206ENST00000602479 COL4A1P02462 1669 aa28.2■■■□□ 2.11
UBE2E3-206ENST00000602479 LDHDQ86WU2 507 aa28.2■■■□□ 2.1
UBE2E3-206ENST00000602479 ISCA1Q9BUE6 129 aa28.2■■■□□ 2.1
UBE2E3-206ENST00000602479 HACL1Q9UJ83 578 aa28.2■■■□□ 2.1
UBE2E3-206ENST00000602479 LARGE2Q8N3Y3 721 aa28.18■■■□□ 2.1
UBE2E3-206ENST00000602479 ZNF428Q96B54 188 aa28.18■■■□□ 2.1
UBE2E3-206ENST00000602479 EPHX2P34913 555 aa28.17■■■□□ 2.1
UBE2E3-206ENST00000602479 ATP5J2-PTCD1G3V325 749 aa28.16■■■□□ 2.1
UBE2E3-206ENST00000602479 BBOX1O75936 387 aa28.16■■■□□ 2.1
UBE2E3-206ENST00000602479 EIF6P56537 245 aaKnown RBP28.16■■■□□ 2.1
UBE2E3-206ENST00000602479 PASKQ96RG2 1323 aa28.16■■■□□ 2.1
UBE2E3-206ENST00000602479 GRAPQ13588 217 aa28.15■■■□□ 2.1
UBE2E3-206ENST00000602479 EAPPQ56P03 285 aaPredicted RBP28.15■■■□□ 2.1
UBE2E3-206ENST00000602479 DDX46Q7L014 1031 aaKnown RBP28.15■■■□□ 2.1
UBE2E3-206ENST00000602479 GRAPLQ8TC17 118 aaPredicted RBP28.15■■■□□ 2.1
UBE2E3-206ENST00000602479 RTFDC1Q9BY42 306 aaPredicted RBP28.15■■■□□ 2.1
UBE2E3-206ENST00000602479 TMX4Q9H1E5 349 aaPredicted RBP28.15■■■□□ 2.1
UBE2E3-206ENST00000602479 MYH3P11055 1940 aa28.15■■■□□ 2.1
UBE2E3-206ENST00000602479 ELL2O00472 640 aaPredicted RBP28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 PPIP5K2O43314 1243 aa28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 AOC3Q16853 763 aa28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 IFFO2Q5TF58 517 aa28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 SP8Q8IXZ3 490 aa28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 C8orf58Q8NAV2 365 aa28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 FAM89AQ96GI7 184 aa28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 PHAXQ9H814 394 aaKnown RBP28.14■■■□□ 2.1
UBE2E3-206ENST00000602479 CACNA1FO60840 1977 aa28.13■■■□□ 2.09
UBE2E3-206ENST00000602479 TRPM7Q96QT4 1865 aa28.13■■■□□ 2.09
UBE2E3-206ENST00000602479 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
UBE2E3-206ENST00000602479 NIM1KQ8IY84 436 aa28.13■■■□□ 2.09
UBE2E3-206ENST00000602479 VPS33BQ9H267 617 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms