RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 OLFM4Q6UX06 510 aa23.73■■□□□ 1.39
GTPBP3-228ENST00000602165 LTBP3Q9NS15 1303 aa23.73■■□□□ 1.39
GTPBP3-228ENST00000602165 ALDH1B1P30837 517 aa23.72■■□□□ 1.39
GTPBP3-228ENST00000602165 HSP90AB3PQ58FF7 597 aa23.72■■□□□ 1.39
GTPBP3-228ENST00000602165 UTP14AQ9BVJ6 771 aaKnown RBP23.72■■□□□ 1.39
GTPBP3-228ENST00000602165 TCIRG1Q13488 830 aa23.71■■□□□ 1.39
GTPBP3-228ENST00000602165 CCDC93Q567U6 631 aa23.71■■□□□ 1.39
GTPBP3-228ENST00000602165 C3orf67Q6ZVT6 689 aa23.71■■□□□ 1.39
GTPBP3-228ENST00000602165 NLRP10Q86W26 655 aa23.71■■□□□ 1.39
GTPBP3-228ENST00000602165 C8orf58Q8NAV2 365 aa23.71■■□□□ 1.39
GTPBP3-228ENST00000602165 RPGRQ92834 1020 aaKnown RBP23.71■■□□□ 1.39
GTPBP3-228ENST00000602165 RRAGCQ9HB90 399 aa23.7■■□□□ 1.38
GTPBP3-228ENST00000602165 HYPKQ9NX55 129 aa23.7■■□□□ 1.38
GTPBP3-228ENST00000602165 CCDC27Q2M243 656 aa23.69■■□□□ 1.38
GTPBP3-228ENST00000602165 ANKRD13DQ6ZTN6 518 aa23.69■■□□□ 1.38
GTPBP3-228ENST00000602165 WWC1Q8IX03 1113 aa23.69■■□□□ 1.38
GTPBP3-228ENST00000602165 PLBD2Q8NHP8 589 aa23.69■■□□□ 1.38
GTPBP3-228ENST00000602165 TSR2Q969E8 191 aaKnown RBP23.69■■□□□ 1.38
GTPBP3-228ENST00000602165 ZNF428Q96B54 188 aa23.69■■□□□ 1.38
GTPBP3-228ENST00000602165 DDX60Q8IY21 1712 aaKnown RBP23.68■■□□□ 1.38
GTPBP3-228ENST00000602165 GLTPD2A6NH11 291 aa23.68■■□□□ 1.38
GTPBP3-228ENST00000602165 TOMM70O94826 608 aa23.68■■□□□ 1.38
GTPBP3-228ENST00000602165 HOXA10P31260 410 aaPredicted RBP23.67■■□□□ 1.38
GTPBP3-228ENST00000602165 SYNE4Q8N205 404 aa23.67■■□□□ 1.38
GTPBP3-228ENST00000602165 TAF1P21675 1872 aa23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 RNF123Q5XPI4 1314 aa23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 FKBP4Q02790 459 aaKnown RBP eCLIP23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 SLC10A5Q5PT55 438 aa23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 C16orf71Q8IYS4 520 aaPredicted RBP23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 RBM17Q96I25 401 aaKnown RBP23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 NLRP3Q96P20 1036 aa23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 PHAXQ9H814 394 aaKnown RBP23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 TRMT112Q9UI30 125 aaKnown RBP23.66■■□□□ 1.38
GTPBP3-228ENST00000602165 WDR90Q96KV7 1748 aa23.65■■□□□ 1.38
GTPBP3-228ENST00000602165 HCLS1P14317 486 aaPredicted RBP23.65■■□□□ 1.38
GTPBP3-228ENST00000602165 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
GTPBP3-228ENST00000602165 ATP5J2-PTCD1G3V325 749 aa23.64■■□□□ 1.37
GTPBP3-228ENST00000602165 HSPA6P17066 643 aa23.64■■□□□ 1.37
GTPBP3-228ENST00000602165 SLC51AQ86UW1 340 aa23.64■■□□□ 1.37
GTPBP3-228ENST00000602165 RTKN2Q8IZC4 609 aa23.64■■□□□ 1.37
GTPBP3-228ENST00000602165 CRAMP1Q96RY5 1269 aa23.64■■□□□ 1.37
GTPBP3-228ENST00000602165 ZNF277Q9NRM2 450 aaPredicted RBP23.64■■□□□ 1.37
GTPBP3-228ENST00000602165 SNED1Q8TER0 1413 aa23.64■■□□□ 1.37
GTPBP3-228ENST00000602165 SH3TC1Q8TE82 1336 aa23.63■■□□□ 1.37
GTPBP3-228ENST00000602165 FAM9BQ8IZU0 186 aa23.63■■□□□ 1.37
GTPBP3-228ENST00000602165 ISCA1Q9BUE6 129 aa23.63■■□□□ 1.37
GTPBP3-228ENST00000602165 CEP350Q5VT06 3117 aa23.63■■□□□ 1.37
GTPBP3-228ENST00000602165 TCERG1O14776 1098 aaKnown RBP23.62■■□□□ 1.37
GTPBP3-228ENST00000602165 PPEF1O14829 653 aaPredicted RBP23.62■■□□□ 1.37
GTPBP3-228ENST00000602165 GOLGA2Q08379 1002 aa23.62■■□□□ 1.37
GTPBP3-228ENST00000602165 CCDC30Q5VVM6 783 aa23.62■■□□□ 1.37
GTPBP3-228ENST00000602165 DPY19L2Q6NUT2 758 aa23.62■■□□□ 1.37
GTPBP3-228ENST00000602165 RIC3Q7Z5B4 369 aa23.62■■□□□ 1.37
GTPBP3-228ENST00000602165 IL16Q14005 1332 aa23.61■■□□□ 1.37
GTPBP3-228ENST00000602165 NCBP3Q53F19 620 aaKnown RBP23.61■■□□□ 1.37
GTPBP3-228ENST00000602165 RBM46Q8TBY0 533 aaKnown RBP23.61■■□□□ 1.37
GTPBP3-228ENST00000602165 ABCC4O15439 1325 aa23.6■■□□□ 1.37
GTPBP3-228ENST00000602165 VEGFAP15692 232 aaPredicted RBP23.59■■□□□ 1.37
GTPBP3-228ENST00000602165 CC2D2BQ6DHV5 1058 aa23.59■■□□□ 1.37
GTPBP3-228ENST00000602165 FAM89AQ96GI7 184 aa23.59■■□□□ 1.37
GTPBP3-228ENST00000602165 DDNO94850 711 aaPredicted RBP23.58■■□□□ 1.37
GTPBP3-228ENST00000602165 IARSP41252 1262 aaKnown RBP23.58■■□□□ 1.37
GTPBP3-228ENST00000602165 TWISTNBQ3B726 338 aaPredicted RBP23.58■■□□□ 1.37
GTPBP3-228ENST00000602165 RTL5Q5HYW3 569 aaPredicted RBP23.58■■□□□ 1.37
GTPBP3-228ENST00000602165 PSMD1Q99460 953 aa23.58■■□□□ 1.37
GTPBP3-228ENST00000602165 CHMP4AQ9BY43 222 aa23.58■■□□□ 1.37
GTPBP3-228ENST00000602165 POTECB2RU33 542 aa23.57■■□□□ 1.36
GTPBP3-228ENST00000602165 MYD88Q99836 296 aa23.57■■□□□ 1.36
GTPBP3-228ENST00000602165 CACNA1FO60840 1977 aa23.57■■□□□ 1.36
GTPBP3-228ENST00000602165 FANCIQ9NVI1 1328 aa23.57■■□□□ 1.36
GTPBP3-228ENST00000602165 COL4A5P29400 1685 aa23.56■■□□□ 1.36
GTPBP3-228ENST00000602165 SCN4AP35499 1836 aa23.55■■□□□ 1.36
GTPBP3-228ENST00000602165 TRIM28Q13263 835 aaKnown RBP23.55■■□□□ 1.36
GTPBP3-228ENST00000602165 DDX46Q7L014 1031 aaKnown RBP23.55■■□□□ 1.36
GTPBP3-228ENST00000602165 WDR63Q8IWG1 891 aa23.55■■□□□ 1.36
GTPBP3-228ENST00000602165 STK31Q9BXU1 1019 aa23.55■■□□□ 1.36
GTPBP3-228ENST00000602165 ZNF541Q9H0D2 1346 aa23.55■■□□□ 1.36
GTPBP3-228ENST00000602165 DDX58O95786 925 aaKnown RBP23.54■■□□□ 1.36
GTPBP3-228ENST00000602165 FSTL1Q12841 308 aa23.54■■□□□ 1.36
GTPBP3-228ENST00000602165 ATP6V0A2Q9Y487 856 aa23.54■■□□□ 1.36
GTPBP3-228ENST00000602165 GRIPAP1Q4V328 841 aa23.53■■□□□ 1.36
GTPBP3-228ENST00000602165 TMX4Q9H1E5 349 aaPredicted RBP23.53■■□□□ 1.36
GTPBP3-228ENST00000602165 COL4A1P02462 1669 aa23.53■■□□□ 1.36
GTPBP3-228ENST00000602165 LRRC37AA6NMS7 1700 aa23.53■■□□□ 1.36
GTPBP3-228ENST00000602165 IRS4O14654 1257 aaPredicted RBP23.52■■□□□ 1.36
GTPBP3-228ENST00000602165 GRAPQ13588 217 aa23.52■■□□□ 1.36
GTPBP3-228ENST00000602165 SMC1BQ8NDV3 1235 aa23.52■■□□□ 1.36
GTPBP3-228ENST00000602165 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
GTPBP3-228ENST00000602165 METTL22Q9BUU2 404 aaPredicted RBP23.52■■□□□ 1.36
GTPBP3-228ENST00000602165 MAP3K2Q9Y2U5 619 aa23.52■■□□□ 1.36
GTPBP3-228ENST00000602165 BBOX1O75936 387 aa23.51■■□□□ 1.35
GTPBP3-228ENST00000602165 APLP1P51693 650 aa23.51■■□□□ 1.35
GTPBP3-228ENST00000602165 G2E3Q7L622 706 aa23.51■■□□□ 1.35
GTPBP3-228ENST00000602165 JDP2Q8WYK2 163 aa23.51■■□□□ 1.35
GTPBP3-228ENST00000602165 SPINK5Q9NQ38 1064 aaPredicted RBP23.51■■□□□ 1.35
GTPBP3-228ENST00000602165 PI4KAP2A4QPH2 592 aa23.5■■□□□ 1.35
GTPBP3-228ENST00000602165 FZD9O00144 591 aa23.5■■□□□ 1.35
GTPBP3-228ENST00000602165 PI4KAP1Q8N8J0 262 aa23.5■■□□□ 1.35
GTPBP3-228ENST00000602165 ZBTB38Q8NAP3 1195 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms