RNA–Protein interactions for RNA: ENST00000602061.5

SYMPK-218, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-218ENST00000602061 RBM17Q96I25 401 aaKnown RBP16.78■□□□□ 0.28
SYMPK-218ENST00000602061 GJA3Q9Y6H8 435 aa16.78■□□□□ 0.28
SYMPK-218ENST00000602061 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.28
SYMPK-218ENST00000602061 GPTP24298 496 aa16.77■□□□□ 0.28
SYMPK-218ENST00000602061 VEGFBP49765 207 aa16.77■□□□□ 0.28
SYMPK-218ENST00000602061 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
SYMPK-218ENST00000602061 LARGE2Q8N3Y3 721 aa16.77■□□□□ 0.28
SYMPK-218ENST00000602061 PNNQ9H307 717 aaKnown RBP16.77■□□□□ 0.28
SYMPK-218ENST00000602061 ZBTB3Q9H5J0 574 aa16.77■□□□□ 0.28
SYMPK-218ENST00000602061 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
SYMPK-218ENST00000602061 ABT1Q9ULW3 272 aaKnown RBP16.77■□□□□ 0.28
SYMPK-218ENST00000602061 RIC1Q4ADV7 1423 aa16.77■□□□□ 0.27
SYMPK-218ENST00000602061 MAP1SQ66K74 1059 aaPredicted RBP16.76■□□□□ 0.27
SYMPK-218ENST00000602061 KDM3BQ7LBC6 1761 aa16.76■□□□□ 0.27
SYMPK-218ENST00000602061 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
SYMPK-218ENST00000602061 PPEF1O14829 653 aaPredicted RBP16.75■□□□□ 0.27
SYMPK-218ENST00000602061 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
SYMPK-218ENST00000602061 NFE2L2Q16236 605 aa16.75■□□□□ 0.27
SYMPK-218ENST00000602061 DEFB115Q30KQ5 88 aa16.75■□□□□ 0.27
SYMPK-218ENST00000602061 PPP1R42Q7Z4L9 355 aa16.75■□□□□ 0.27
SYMPK-218ENST00000602061 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
SYMPK-218ENST00000602061 TTLL7Q6ZT98 887 aa16.74■□□□□ 0.27
SYMPK-218ENST00000602061 PAXIP1Q6ZW49 1069 aaPredicted RBP16.74■□□□□ 0.27
SYMPK-218ENST00000602061 CRAMP1Q96RY5 1269 aa16.74■□□□□ 0.27
SYMPK-218ENST00000602061 ADAMTSL1Q8N6G6 1762 aa16.74■□□□□ 0.27
SYMPK-218ENST00000602061 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
SYMPK-218ENST00000602061 HOXA10P31260 410 aaPredicted RBP16.73■□□□□ 0.27
SYMPK-218ENST00000602061 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
SYMPK-218ENST00000602061 NUP98P52948 1817 aa16.73■□□□□ 0.27
SYMPK-218ENST00000602061 UBN2Q6ZU65 1347 aa16.72■□□□□ 0.27
SYMPK-218ENST00000602061 SNED1Q8TER0 1413 aa16.72■□□□□ 0.27
SYMPK-218ENST00000602061 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
SYMPK-218ENST00000602061 PPIP5K2O43314 1243 aa16.72■□□□□ 0.27
SYMPK-218ENST00000602061 MAP2K1Q02750 393 aaPredicted RBP16.72■□□□□ 0.27
SYMPK-218ENST00000602061 SUSD4Q5VX71 490 aa16.72■□□□□ 0.27
SYMPK-218ENST00000602061 GIGYF2Q6Y7W6 1299 aaKnown RBP16.72■□□□□ 0.27
SYMPK-218ENST00000602061 NLRP3Q96P20 1036 aa16.72■□□□□ 0.27
SYMPK-218ENST00000602061 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
SYMPK-218ENST00000602061 TSPYL4Q9UJ04 414 aa16.72■□□□□ 0.27
SYMPK-218ENST00000602061 DLG5Q8TDM6 1919 aa16.71■□□□□ 0.27
SYMPK-218ENST00000602061 NTSR2O95665 410 aa16.71■□□□□ 0.27
SYMPK-218ENST00000602061 SUPT20HQ8NEM7 779 aa16.71■□□□□ 0.27
SYMPK-218ENST00000602061 BEGAINQ9BUH8 593 aa16.71■□□□□ 0.27
SYMPK-218ENST00000602061 DDX21Q9NR30 783 aaKnown RBP eCLIP16.71■□□□□ 0.27
SYMPK-218ENST00000602061 WBP1LQ9NX94 342 aa16.71■□□□□ 0.27
SYMPK-218ENST00000602061 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
SYMPK-218ENST00000602061 ECE1P42892 770 aa16.7■□□□□ 0.26
SYMPK-218ENST00000602061 LBX1P52954 281 aa16.7■□□□□ 0.26
SYMPK-218ENST00000602061 ZNF34Q8IZ26 560 aa16.7■□□□□ 0.26
SYMPK-218ENST00000602061 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
SYMPK-218ENST00000602061 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
SYMPK-218ENST00000602061 GRM1Q13255 1194 aa16.69■□□□□ 0.26
SYMPK-218ENST00000602061 USP50Q70EL3 339 aaPredicted RBP16.69■□□□□ 0.26
SYMPK-218ENST00000602061 EPS15P42566 896 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 SCNN1DP51172 638 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 LMOD3Q0VAK6 560 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 AOC3Q16853 763 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 HSP90AB3PQ58FF7 597 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 PLEKHF1Q96S99 279 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 COL4A5P29400 1685 aa16.68■□□□□ 0.26
SYMPK-218ENST00000602061 ATP6V0A2Q9Y487 856 aa16.67■□□□□ 0.26
SYMPK-218ENST00000602061 HSPA8P11142 646 aaKnown RBP16.66■□□□□ 0.26
SYMPK-218ENST00000602061 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-218ENST00000602061 CAPNS2Q96L46 248 aa16.66■□□□□ 0.26
SYMPK-218ENST00000602061 ADARB2Q9NS39 739 aaKnown RBP16.66■□□□□ 0.26
SYMPK-218ENST00000602061 ABCC4O15439 1325 aa16.66■□□□□ 0.26
SYMPK-218ENST00000602061 LTBP1Q14766 1721 aa16.65■□□□□ 0.26
SYMPK-218ENST00000602061 RIPK4P57078 832 aa16.65■□□□□ 0.26
SYMPK-218ENST00000602061 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
SYMPK-218ENST00000602061 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
SYMPK-218ENST00000602061 GPRC5DQ9NZD1 345 aa16.65■□□□□ 0.26
SYMPK-218ENST00000602061 ZNRF3Q9ULT6 936 aa16.65■□□□□ 0.26
SYMPK-218ENST00000602061 MPNDQ8N594 471 aa16.64■□□□□ 0.25
SYMPK-218ENST00000602061 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
SYMPK-218ENST00000602061 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
SYMPK-218ENST00000602061 CDHR2Q9BYE9 1310 aa16.64■□□□□ 0.25
SYMPK-218ENST00000602061 BBOX1O75936 387 aa16.63■□□□□ 0.25
SYMPK-218ENST00000602061 AIMP1Q12904 312 aaKnown RBP16.63■□□□□ 0.25
SYMPK-218ENST00000602061 TNIP1Q15025 636 aa16.63■□□□□ 0.25
SYMPK-218ENST00000602061 SLC10A5Q5PT55 438 aa16.63■□□□□ 0.25
SYMPK-218ENST00000602061 CIAPIN1Q6FI81 312 aa16.63■□□□□ 0.25
SYMPK-218ENST00000602061 CYP4F22Q6NT55 531 aa16.63■□□□□ 0.25
SYMPK-218ENST00000602061 GPR101Q96P66 508 aaPredicted RBP16.63■□□□□ 0.25
SYMPK-218ENST00000602061 TRMT112Q9UI30 125 aaKnown RBP16.63■□□□□ 0.25
SYMPK-218ENST00000602061 TLL2Q9Y6L7 1015 aa16.63■□□□□ 0.25
SYMPK-218ENST00000602061 TRAF5O00463 557 aa16.62■□□□□ 0.25
SYMPK-218ENST00000602061 ANXA1P04083 346 aa16.62■□□□□ 0.25
SYMPK-218ENST00000602061 GMPSP49915 693 aaPredicted RBP16.62■□□□□ 0.25
SYMPK-218ENST00000602061 SP8Q8IXZ3 490 aa16.62■□□□□ 0.25
SYMPK-218ENST00000602061 RTFDC1Q9BY42 306 aaPredicted RBP16.62■□□□□ 0.25
SYMPK-218ENST00000602061 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
SYMPK-218ENST00000602061 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
SYMPK-218ENST00000602061 CELF2O95319 508 aaKnown RBP16.61■□□□□ 0.25
SYMPK-218ENST00000602061 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
SYMPK-218ENST00000602061 CXCL9Q07325 125 aa16.61■□□□□ 0.25
SYMPK-218ENST00000602061 KIAA2012Q0VF49 1180 aa16.61■□□□□ 0.25
SYMPK-218ENST00000602061 PROSER3Q2NL68 480 aa16.61■□□□□ 0.25
SYMPK-218ENST00000602061 COPS6Q7L5N1 327 aa16.61■□□□□ 0.25
SYMPK-218ENST00000602061 TMC4Q7Z404 712 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms