RNA–Protein interactions for RNA: ENST00000601925.5

SMG9-212, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-212ENST00000601925 HTRA3P83110 453 aa17.25■□□□□ 0.35
SMG9-212ENST00000601925 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
SMG9-212ENST00000601925 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
SMG9-212ENST00000601925 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMG9-212ENST00000601925 VAMP4O75379 141 aa17.23■□□□□ 0.35
SMG9-212ENST00000601925 ERFEQ4G0M1 354 aa17.23■□□□□ 0.35
SMG9-212ENST00000601925 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
SMG9-212ENST00000601925 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
SMG9-212ENST00000601925 TAOK3Q9H2K8 898 aa17.23■□□□□ 0.35
SMG9-212ENST00000601925 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
SMG9-212ENST00000601925 NPR1P16066 1061 aa17.21■□□□□ 0.35
SMG9-212ENST00000601925 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
SMG9-212ENST00000601925 HDGFL1Q5TGJ6 251 aa17.21■□□□□ 0.35
SMG9-212ENST00000601925 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
SMG9-212ENST00000601925 TTLL7Q6ZT98 887 aa17.21■□□□□ 0.35
SMG9-212ENST00000601925 ZNF428Q96B54 188 aa17.21■□□□□ 0.35
SMG9-212ENST00000601925 NUP98P52948 1817 aa17.21■□□□□ 0.35
SMG9-212ENST00000601925 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
SMG9-212ENST00000601925 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
SMG9-212ENST00000601925 KLRG1Q96E93 195 aa17.2■□□□□ 0.34
SMG9-212ENST00000601925 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
SMG9-212ENST00000601925 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
SMG9-212ENST00000601925 OLFM4Q6UX06 510 aa17.19■□□□□ 0.34
SMG9-212ENST00000601925 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
SMG9-212ENST00000601925 LRP10Q7Z4F1 713 aa17.18■□□□□ 0.34
SMG9-212ENST00000601925 JMYQ8N9B5 988 aa17.18■□□□□ 0.34
SMG9-212ENST00000601925 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
SMG9-212ENST00000601925 ABCC12Q96J65 1359 aa17.17■□□□□ 0.34
SMG9-212ENST00000601925 CAPN15O75808 1086 aa17.17■□□□□ 0.34
SMG9-212ENST00000601925 DDNO94850 711 aaPredicted RBP17.17■□□□□ 0.34
SMG9-212ENST00000601925 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
SMG9-212ENST00000601925 MYL6BP14649 208 aa17.17■□□□□ 0.34
SMG9-212ENST00000601925 ALDH1L2Q3SY69 923 aa17.17■□□□□ 0.34
SMG9-212ENST00000601925 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
SMG9-212ENST00000601925 STK31Q9BXU1 1019 aa17.17■□□□□ 0.34
SMG9-212ENST00000601925 UBN2Q6ZU65 1347 aa17.17■□□□□ 0.34
SMG9-212ENST00000601925 SNED1Q8TER0 1413 aa17.16■□□□□ 0.34
SMG9-212ENST00000601925 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMG9-212ENST00000601925 PDIA6Q15084 440 aa17.16■□□□□ 0.34
SMG9-212ENST00000601925 NUTM1Q86Y26 1132 aa17.16■□□□□ 0.34
SMG9-212ENST00000601925 DBF4Q9UBU7 674 aaPredicted RBP17.16■□□□□ 0.34
SMG9-212ENST00000601925 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
SMG9-212ENST00000601925 ERBB4Q15303 1308 aa17.16■□□□□ 0.34
SMG9-212ENST00000601925 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
SMG9-212ENST00000601925 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
SMG9-212ENST00000601925 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
SMG9-212ENST00000601925 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
SMG9-212ENST00000601925 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
SMG9-212ENST00000601925 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
SMG9-212ENST00000601925 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
SMG9-212ENST00000601925 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
SMG9-212ENST00000601925 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
SMG9-212ENST00000601925 GIGYF2Q6Y7W6 1299 aaKnown RBP17.14■□□□□ 0.33
SMG9-212ENST00000601925 KIF6Q6ZMV9 814 aa17.14■□□□□ 0.33
SMG9-212ENST00000601925 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
SMG9-212ENST00000601925 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMG9-212ENST00000601925 ZNF277Q9NRM2 450 aaPredicted RBP17.14■□□□□ 0.33
SMG9-212ENST00000601925 CHPF2Q9P2E5 772 aa17.14■□□□□ 0.33
SMG9-212ENST00000601925 IBTKQ9P2D0 1353 aaPredicted RBP17.14■□□□□ 0.33
SMG9-212ENST00000601925 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
SMG9-212ENST00000601925 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
SMG9-212ENST00000601925 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
SMG9-212ENST00000601925 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
SMG9-212ENST00000601925 GPTP24298 496 aa17.13■□□□□ 0.33
SMG9-212ENST00000601925 L3MBTL3Q96JM7 780 aaPredicted RBP17.13■□□□□ 0.33
SMG9-212ENST00000601925 SMC4Q9NTJ3 1288 aa17.13■□□□□ 0.33
SMG9-212ENST00000601925 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
SMG9-212ENST00000601925 NTSR2O95665 410 aa17.12■□□□□ 0.33
SMG9-212ENST00000601925 HOXA10P31260 410 aaPredicted RBP17.12■□□□□ 0.33
SMG9-212ENST00000601925 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
SMG9-212ENST00000601925 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
SMG9-212ENST00000601925 ANXA1P04083 346 aa17.11■□□□□ 0.33
SMG9-212ENST00000601925 SYNE4Q8N205 404 aa17.11■□□□□ 0.33
SMG9-212ENST00000601925 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
SMG9-212ENST00000601925 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
SMG9-212ENST00000601925 SCN4AP35499 1836 aa17.1■□□□□ 0.33
SMG9-212ENST00000601925 FZD9O00144 591 aa17.1■□□□□ 0.33
SMG9-212ENST00000601925 BCAR3O75815 825 aa17.1■□□□□ 0.33
SMG9-212ENST00000601925 CHADLQ6NUI6 762 aa17.1■□□□□ 0.33
SMG9-212ENST00000601925 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
SMG9-212ENST00000601925 PSMD1Q99460 953 aa17.1■□□□□ 0.33
SMG9-212ENST00000601925 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
SMG9-212ENST00000601925 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
SMG9-212ENST00000601925 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
SMG9-212ENST00000601925 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
SMG9-212ENST00000601925 COL4A5P29400 1685 aa17.08■□□□□ 0.32
SMG9-212ENST00000601925 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
SMG9-212ENST00000601925 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
SMG9-212ENST00000601925 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
SMG9-212ENST00000601925 CC2D2BQ6DHV5 1058 aa17.08■□□□□ 0.32
SMG9-212ENST00000601925 CRAMP1Q96RY5 1269 aa17.08■□□□□ 0.32
SMG9-212ENST00000601925 KIF16BQ96L93 1317 aa17.07■□□□□ 0.32
SMG9-212ENST00000601925 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
SMG9-212ENST00000601925 G2E3Q7L622 706 aa17.07■□□□□ 0.32
SMG9-212ENST00000601925 PPP1R42Q7Z4L9 355 aa17.07■□□□□ 0.32
SMG9-212ENST00000601925 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
SMG9-212ENST00000601925 RPGRQ92834 1020 aaKnown RBP17.07■□□□□ 0.32
SMG9-212ENST00000601925 PHAXQ9H814 394 aaKnown RBP17.07■□□□□ 0.32
SMG9-212ENST00000601925 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
SMG9-212ENST00000601925 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms