RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
IRF3-225ENST00000600022 FOXN1O15353 648 aa18.06■□□□□ 0.48
IRF3-225ENST00000600022 ANXA1P04083 346 aa18.06■□□□□ 0.48
IRF3-225ENST00000600022 VEGFBP49765 207 aa18.06■□□□□ 0.48
IRF3-225ENST00000600022 ZNF34Q8IZ26 560 aa18.06■□□□□ 0.48
IRF3-225ENST00000600022 PRKRIP1Q9H875 184 aaPredicted RBP18.06■□□□□ 0.48
IRF3-225ENST00000600022 CNTNAP1P78357 1384 aa18.05■□□□□ 0.48
IRF3-225ENST00000600022 PDIA6Q15084 440 aa18.05■□□□□ 0.48
IRF3-225ENST00000600022 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
IRF3-225ENST00000600022 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
IRF3-225ENST00000600022 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
IRF3-225ENST00000600022 PROSER3Q2NL68 480 aa18.04■□□□□ 0.48
IRF3-225ENST00000600022 CNTROBQ8N137 903 aa18.04■□□□□ 0.48
IRF3-225ENST00000600022 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
IRF3-225ENST00000600022 GJA3Q9Y6H8 435 aa18.04■□□□□ 0.48
IRF3-225ENST00000600022 NUP98P52948 1817 aa18.04■□□□□ 0.48
IRF3-225ENST00000600022 SCN4AP35499 1836 aa18.03■□□□□ 0.48
IRF3-225ENST00000600022 TMEM88BA6NKF7 163 aa18.03■□□□□ 0.48
IRF3-225ENST00000600022 NTSR2O95665 410 aa18.03■□□□□ 0.48
IRF3-225ENST00000600022 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
IRF3-225ENST00000600022 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
IRF3-225ENST00000600022 PSMD1Q99460 953 aa18.03■□□□□ 0.48
IRF3-225ENST00000600022 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
IRF3-225ENST00000600022 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.48
IRF3-225ENST00000600022 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.48
IRF3-225ENST00000600022 EPS15P42566 896 aa18.02■□□□□ 0.48
IRF3-225ENST00000600022 GPC2Q8N158 579 aa18.02■□□□□ 0.48
IRF3-225ENST00000600022 RPGRQ92834 1020 aaKnown RBP18.02■□□□□ 0.48
IRF3-225ENST00000600022 GIGYF2Q6Y7W6 1299 aaKnown RBP18.01■□□□□ 0.47
IRF3-225ENST00000600022 JDP2Q8WYK2 163 aa18.01■□□□□ 0.47
IRF3-225ENST00000600022 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
IRF3-225ENST00000600022 ADAMTSL1Q8N6G6 1762 aa18.01■□□□□ 0.47
IRF3-225ENST00000600022 LTBP1Q14766 1721 aa18.01■□□□□ 0.47
IRF3-225ENST00000600022 CCER2I3L3R5 266 aa18■□□□□ 0.47
IRF3-225ENST00000600022 NEFMP07197 916 aa18■□□□□ 0.47
IRF3-225ENST00000600022 SCNN1DP51172 638 aa18■□□□□ 0.47
IRF3-225ENST00000600022 RALBP1Q15311 655 aa18■□□□□ 0.47
IRF3-225ENST00000600022 TSPYL4Q9UJ04 414 aa18■□□□□ 0.47
IRF3-225ENST00000600022 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
IRF3-225ENST00000600022 RIPK4P57078 832 aa17.99■□□□□ 0.47
IRF3-225ENST00000600022 KRT24Q2M2I5 525 aa17.99■□□□□ 0.47
IRF3-225ENST00000600022 LARGE2Q8N3Y3 721 aa17.99■□□□□ 0.47
IRF3-225ENST00000600022 CRAMP1Q96RY5 1269 aa17.99■□□□□ 0.47
IRF3-225ENST00000600022 EIF6P56537 245 aaKnown RBP17.98■□□□□ 0.47
IRF3-225ENST00000600022 PNMA8AQ86V59 439 aaPredicted RBP17.98■□□□□ 0.47
IRF3-225ENST00000600022 RBM17Q96I25 401 aaKnown RBP17.98■□□□□ 0.47
IRF3-225ENST00000600022 TRAF5O00463 557 aa17.97■□□□□ 0.47
IRF3-225ENST00000600022 AOC3Q16853 763 aa17.97■□□□□ 0.47
IRF3-225ENST00000600022 DEFB115Q30KQ5 88 aa17.97■□□□□ 0.47
IRF3-225ENST00000600022 SLC10A5Q5PT55 438 aa17.97■□□□□ 0.47
IRF3-225ENST00000600022 CC2D2BQ6DHV5 1058 aa17.97■□□□□ 0.47
IRF3-225ENST00000600022 WBP1LQ9NX94 342 aa17.97■□□□□ 0.47
IRF3-225ENST00000600022 MAPK8IP3Q9UPT6 1336 aa17.97■□□□□ 0.47
IRF3-225ENST00000600022 HCLS1P14317 486 aaPredicted RBP17.96■□□□□ 0.47
IRF3-225ENST00000600022 AIMP1Q12904 312 aaKnown RBP17.96■□□□□ 0.47
IRF3-225ENST00000600022 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
IRF3-225ENST00000600022 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
IRF3-225ENST00000600022 RIC1Q4ADV7 1423 aa17.96■□□□□ 0.47
IRF3-225ENST00000600022 MYBBP1AQ9BQG0 1328 aaKnown RBP17.96■□□□□ 0.46
IRF3-225ENST00000600022 IBTKQ9P2D0 1353 aaPredicted RBP17.95■□□□□ 0.46
IRF3-225ENST00000600022 RASSF10A6NK89 507 aa17.95■□□□□ 0.46
IRF3-225ENST00000600022 TMPOP42166 694 aaKnown RBP17.95■□□□□ 0.46
IRF3-225ENST00000600022 LBX1P52954 281 aa17.95■□□□□ 0.46
IRF3-225ENST00000600022 CST9Q5W186 159 aa17.95■□□□□ 0.46
IRF3-225ENST00000600022 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
IRF3-225ENST00000600022 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
IRF3-225ENST00000600022 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
IRF3-225ENST00000600022 ATP6V0A2Q9Y487 856 aa17.95■□□□□ 0.46
IRF3-225ENST00000600022 ABCC4O15439 1325 aa17.95■□□□□ 0.46
IRF3-225ENST00000600022 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
IRF3-225ENST00000600022 CXCL9Q07325 125 aa17.94■□□□□ 0.46
IRF3-225ENST00000600022 NEUROD2Q15784 382 aa17.94■□□□□ 0.46
IRF3-225ENST00000600022 CCDC146Q8IYE0 955 aa17.94■□□□□ 0.46
IRF3-225ENST00000600022 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
IRF3-225ENST00000600022 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
IRF3-225ENST00000600022 WDR33Q9C0J8 1336 aaKnown RBP17.94■□□□□ 0.46
IRF3-225ENST00000600022 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
IRF3-225ENST00000600022 NLRP10Q86W26 655 aa17.93■□□□□ 0.46
IRF3-225ENST00000600022 NIM1KQ8IY84 436 aa17.93■□□□□ 0.46
IRF3-225ENST00000600022 ABT1Q9ULW3 272 aaKnown RBP17.93■□□□□ 0.46
IRF3-225ENST00000600022 LMOD1P29536 600 aaPredicted RBP17.92■□□□□ 0.46
IRF3-225ENST00000600022 CTCFP49711 727 aaPredicted RBP17.92■□□□□ 0.46
IRF3-225ENST00000600022 PRDM10Q9NQV6 1147 aa17.92■□□□□ 0.46
IRF3-225ENST00000600022 SHTN1A0MZ66 631 aa17.91■□□□□ 0.46
IRF3-225ENST00000600022 AIDAQ96BJ3 306 aa17.91■□□□□ 0.46
IRF3-225ENST00000600022 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
IRF3-225ENST00000600022 HSPA8P11142 646 aaKnown RBP17.9■□□□□ 0.46
IRF3-225ENST00000600022 GRM1Q13255 1194 aa17.9■□□□□ 0.46
IRF3-225ENST00000600022 TCIRG1Q13488 830 aa17.9■□□□□ 0.46
IRF3-225ENST00000600022 CYP4F22Q6NT55 531 aa17.9■□□□□ 0.46
IRF3-225ENST00000600022 DLK2Q6UY11 383 aa17.9■□□□□ 0.46
IRF3-225ENST00000600022 RTFDC1Q9BY42 306 aaPredicted RBP17.9■□□□□ 0.46
IRF3-225ENST00000600022 GPRC5DQ9NZD1 345 aa17.9■□□□□ 0.46
IRF3-225ENST00000600022 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
IRF3-225ENST00000600022 TAF1P21675 1872 aa17.89■□□□□ 0.45
IRF3-225ENST00000600022 RAD17O75943 681 aa17.89■□□□□ 0.45
IRF3-225ENST00000600022 CENPBP07199 599 aaPredicted RBP17.89■□□□□ 0.45
IRF3-225ENST00000600022 GMPSP49915 693 aaPredicted RBP17.89■□□□□ 0.45
IRF3-225ENST00000600022 HIRAP54198 1017 aaPredicted RBP17.89■□□□□ 0.45
IRF3-225ENST00000600022 GRIPAP1Q4V328 841 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms