RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 SWI5Q1ZZU3 235 aa11.83□□□□□ -0.52
LINC00343-208ENST00000599264 LINC00114Q6XXX2 140 aa11.83□□□□□ -0.52
LINC00343-208ENST00000599264 SLC30A3Q99726 388 aa11.83□□□□□ -0.52
LINC00343-208ENST00000599264 TGFBR3LH3BV60 316 aa11.82□□□□□ -0.52
LINC00343-208ENST00000599264 EPB42P16452 691 aa11.82□□□□□ -0.52
LINC00343-208ENST00000599264 DGKGP49619 791 aa11.82□□□□□ -0.52
LINC00343-208ENST00000599264 ELOAQ14241 798 aaKnown RBP11.82□□□□□ -0.52
LINC00343-208ENST00000599264 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
LINC00343-208ENST00000599264 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
LINC00343-208ENST00000599264 ADARB2-AS1A8MUL3 147 aa11.81□□□□□ -0.52
LINC00343-208ENST00000599264 ACIN1Q9UKV3 1341 aaKnown RBP11.81□□□□□ -0.52
LINC00343-208ENST00000599264 HOXB4P17483 251 aaPredicted RBP11.8□□□□□ -0.52
LINC00343-208ENST00000599264 GRIN2CQ14957 1233 aa11.8□□□□□ -0.52
LINC00343-208ENST00000599264 TNFRSF25Q93038 417 aa11.8□□□□□ -0.52
LINC00343-208ENST00000599264 PLA2G4EQ3MJ16 856 aa11.78□□□□□ -0.52
LINC00343-208ENST00000599264 BHMTQ93088 406 aa11.78□□□□□ -0.52
LINC00343-208ENST00000599264 PNMA5Q96PV4 448 aa11.78□□□□□ -0.52
LINC00343-208ENST00000599264 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
LINC00343-208ENST00000599264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.77□□□□□ -0.53
LINC00343-208ENST00000599264 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
LINC00343-208ENST00000599264 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
LINC00343-208ENST00000599264 MSTNO14793 375 aa11.76□□□□□ -0.53
LINC00343-208ENST00000599264 ATG7O95352 703 aa11.76□□□□□ -0.53
LINC00343-208ENST00000599264 DGKZQ13574 1117 aa11.76□□□□□ -0.53
LINC00343-208ENST00000599264 MYO19Q96H55 970 aa11.76□□□□□ -0.53
LINC00343-208ENST00000599264 KLK14Q9P0G3 267 aa11.76□□□□□ -0.53
LINC00343-208ENST00000599264 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
LINC00343-208ENST00000599264 ADH7P40394 386 aa11.75□□□□□ -0.53
LINC00343-208ENST00000599264 PBXIP1Q96AQ6 731 aa11.75□□□□□ -0.53
LINC00343-208ENST00000599264 MDFIQ99750 246 aa11.75□□□□□ -0.53
LINC00343-208ENST00000599264 SUV39H2Q9H5I1 410 aa11.75□□□□□ -0.53
LINC00343-208ENST00000599264 QTRT2Q9H974 415 aaKnown RBP11.75□□□□□ -0.53
LINC00343-208ENST00000599264 COL8A1P27658 744 aa11.74□□□□□ -0.53
LINC00343-208ENST00000599264 CCINQ13939 588 aa11.74□□□□□ -0.53
LINC00343-208ENST00000599264 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
LINC00343-208ENST00000599264 DMGDHQ9UI17 866 aaKnown RBP11.74□□□□□ -0.53
LINC00343-208ENST00000599264 ZMIZ1Q9ULJ6 1067 aa11.74□□□□□ -0.53
LINC00343-208ENST00000599264 BCS1LQ9Y276 419 aa11.74□□□□□ -0.53
LINC00343-208ENST00000599264 PRMT3O60678 531 aa11.73□□□□□ -0.53
LINC00343-208ENST00000599264 IDH3AP50213 366 aa11.73□□□□□ -0.53
LINC00343-208ENST00000599264 ARSDP51689 593 aa11.73□□□□□ -0.53
LINC00343-208ENST00000599264 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
LINC00343-208ENST00000599264 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
LINC00343-208ENST00000599264 C11orf16Q9NQ32 467 aa11.73□□□□□ -0.53
LINC00343-208ENST00000599264 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
LINC00343-208ENST00000599264 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.72□□□□□ -0.53
LINC00343-208ENST00000599264 KRBA1A5PL33 1030 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 MICAL2O94851 1124 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 INPP5BP32019 993 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 TBC1D8BQ0IIM8 1120 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 FKBP5Q13451 457 aaPredicted RBP11.71□□□□□ -0.53
LINC00343-208ENST00000599264 IFT43Q96FT9 208 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 PLVAPQ9BX97 442 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 GSX2Q9BZM3 304 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 IGFLR1Q9H665 355 aa11.71□□□□□ -0.53
LINC00343-208ENST00000599264 M0R082 166 aa11.7□□□□□ -0.54
LINC00343-208ENST00000599264 ZNF417Q8TAU3 575 aa11.7□□□□□ -0.54
LINC00343-208ENST00000599264 ZNF587Q96SQ5 575 aaPredicted RBP11.7□□□□□ -0.54
LINC00343-208ENST00000599264 PCSK7Q16549 785 aa11.69□□□□□ -0.54
LINC00343-208ENST00000599264 SPOCK3Q9BQ16 436 aa11.69□□□□□ -0.54
LINC00343-208ENST00000599264 PRDM6Q9NQX0 595 aa11.69□□□□□ -0.54
LINC00343-208ENST00000599264 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
LINC00343-208ENST00000599264 OCLNQ16625 522 aa11.68□□□□□ -0.54
LINC00343-208ENST00000599264 PRRT3Q5FWE3 981 aa11.68□□□□□ -0.54
LINC00343-208ENST00000599264 COL26A1Q96A83 441 aa11.68□□□□□ -0.54
LINC00343-208ENST00000599264 TRIM11Q96F44 468 aa11.68□□□□□ -0.54
LINC00343-208ENST00000599264 ARID3CA6NKF2 412 aa11.67□□□□□ -0.54
LINC00343-208ENST00000599264 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
LINC00343-208ENST00000599264 NFKB1P19838 968 aa11.67□□□□□ -0.54
LINC00343-208ENST00000599264 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
LINC00343-208ENST00000599264 MICALL1Q8N3F8 863 aa11.67□□□□□ -0.54
LINC00343-208ENST00000599264 SPATA31C1P0DKV0 1188 aa11.66□□□□□ -0.54
LINC00343-208ENST00000599264 ARID4AP29374 1257 aaPredicted RBP11.66□□□□□ -0.54
LINC00343-208ENST00000599264 COX20Q5RI15 118 aa11.66□□□□□ -0.54
LINC00343-208ENST00000599264 C16orf46Q6P387 395 aa11.66□□□□□ -0.54
LINC00343-208ENST00000599264 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
LINC00343-208ENST00000599264 LRFN2Q9ULH4 789 aa11.66□□□□□ -0.54
LINC00343-208ENST00000599264 SLC6A14Q9UN76 642 aa11.66□□□□□ -0.54
LINC00343-208ENST00000599264 STARD13Q9Y3M8 1113 aa11.66□□□□□ -0.54
LINC00343-208ENST00000599264 LILRB5O75023 590 aa11.65□□□□□ -0.54
LINC00343-208ENST00000599264 ALBP02768 609 aa11.65□□□□□ -0.54
LINC00343-208ENST00000599264 BRD2P25440 801 aaKnown RBP11.65□□□□□ -0.54
LINC00343-208ENST00000599264 TREML1Q86YW5 311 aa11.65□□□□□ -0.54
LINC00343-208ENST00000599264 CLP1Q92989 425 aaKnown RBP11.65□□□□□ -0.54
LINC00343-208ENST00000599264 MAP3K6O95382 1288 aa11.64□□□□□ -0.55
LINC00343-208ENST00000599264 ITGB2P05107 769 aa11.64□□□□□ -0.55
LINC00343-208ENST00000599264 DNAJB12Q9NXW2 375 aaKnown RBP11.64□□□□□ -0.55
LINC00343-208ENST00000599264 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
LINC00343-208ENST00000599264 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
LINC00343-208ENST00000599264 C20orf204Q6ZNR8 217 aa11.62□□□□□ -0.55
LINC00343-208ENST00000599264 KRT25Q7Z3Z0 450 aa11.62□□□□□ -0.55
LINC00343-208ENST00000599264 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
LINC00343-208ENST00000599264 FAM13BQ9NYF5 915 aa11.62□□□□□ -0.55
LINC00343-208ENST00000599264 OPLAHO14841 1288 aa11.61□□□□□ -0.55
LINC00343-208ENST00000599264 PROCP04070 461 aa11.61□□□□□ -0.55
LINC00343-208ENST00000599264 RARAP10276 462 aa11.61□□□□□ -0.55
LINC00343-208ENST00000599264 TRIM28Q13263 835 aaKnown RBP11.61□□□□□ -0.55
LINC00343-208ENST00000599264 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
LINC00343-208ENST00000599264 MKNK1Q9BUB5 465 aa11.61□□□□□ -0.55
LINC00343-208ENST00000599264 JPH1Q9HDC5 661 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms