RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 CCDC93Q567U6 631 aa24.06■■□□□ 1.44
SNRPA-205ENST00000598923 COPS6Q7L5N1 327 aa24.06■■□□□ 1.44
SNRPA-205ENST00000598923 TSR2Q969E8 191 aaKnown RBP24.06■■□□□ 1.44
SNRPA-205ENST00000598923 CHPF2Q9P2E5 772 aa24.06■■□□□ 1.44
SNRPA-205ENST00000598923 RIC1Q4ADV7 1423 aa24.06■■□□□ 1.44
SNRPA-205ENST00000598923 UBN2Q6ZU65 1347 aa24.06■■□□□ 1.44
SNRPA-205ENST00000598923 HOXB7P09629 217 aa24.05■■□□□ 1.44
SNRPA-205ENST00000598923 GTF2E1P29083 439 aaPredicted RBP24.05■■□□□ 1.44
SNRPA-205ENST00000598923 CRY2Q49AN0 593 aa24.05■■□□□ 1.44
SNRPA-205ENST00000598923 XAGE3Q8WTP9 111 aa24.05■■□□□ 1.44
SNRPA-205ENST00000598923 DDX21Q9NR30 783 aaKnown RBP eCLIP24.05■■□□□ 1.44
SNRPA-205ENST00000598923 ANKRD36CQ5JPF3 1778 aa24.04■■□□□ 1.44
SNRPA-205ENST00000598923 GPTP24298 496 aa24.04■■□□□ 1.44
SNRPA-205ENST00000598923 ALDH1B1P30837 517 aa24.04■■□□□ 1.44
SNRPA-205ENST00000598923 GIGYF2Q6Y7W6 1299 aaKnown RBP24.04■■□□□ 1.44
SNRPA-205ENST00000598923 NUTM1Q86Y26 1132 aa24.04■■□□□ 1.44
SNRPA-205ENST00000598923 ZNF34Q8IZ26 560 aa24.04■■□□□ 1.44
SNRPA-205ENST00000598923 C8orf58Q8NAV2 365 aa24.04■■□□□ 1.44
SNRPA-205ENST00000598923 SNED1Q8TER0 1413 aa24.02■■□□□ 1.44
SNRPA-205ENST00000598923 HTRA3P83110 453 aa24.02■■□□□ 1.44
SNRPA-205ENST00000598923 FKBP4Q02790 459 aaKnown RBP eCLIP24.02■■□□□ 1.44
SNRPA-205ENST00000598923 NCBP3Q53F19 620 aaKnown RBP24.02■■□□□ 1.44
SNRPA-205ENST00000598923 SUSD4Q5VX71 490 aa24.02■■□□□ 1.44
SNRPA-205ENST00000598923 OLFM4Q6UX06 510 aa24.02■■□□□ 1.44
SNRPA-205ENST00000598923 DBF4Q9UBU7 674 aaPredicted RBP24.02■■□□□ 1.44
SNRPA-205ENST00000598923 SCN4AP35499 1836 aa24.01■■□□□ 1.43
SNRPA-205ENST00000598923 DDNO94850 711 aaPredicted RBP24■■□□□ 1.43
SNRPA-205ENST00000598923 NTSR2O95665 410 aa24■■□□□ 1.43
SNRPA-205ENST00000598923 RTKN2Q8IZC4 609 aa24■■□□□ 1.43
SNRPA-205ENST00000598923 TSPYL6Q8N831 410 aa24■■□□□ 1.43
SNRPA-205ENST00000598923 HOXA10P31260 410 aaPredicted RBP23.99■■□□□ 1.43
SNRPA-205ENST00000598923 WDR63Q8IWG1 891 aa23.99■■□□□ 1.43
SNRPA-205ENST00000598923 KLRG1Q96E93 195 aa23.99■■□□□ 1.43
SNRPA-205ENST00000598923 IL16Q14005 1332 aa23.99■■□□□ 1.43
SNRPA-205ENST00000598923 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
SNRPA-205ENST00000598923 HYPKQ9NX55 129 aa23.98■■□□□ 1.43
SNRPA-205ENST00000598923 LAMB2P55268 1798 aa23.97■■□□□ 1.43
SNRPA-205ENST00000598923 ZNF277Q9NRM2 450 aaPredicted RBP23.97■■□□□ 1.43
SNRPA-205ENST00000598923 CCER2I3L3R5 266 aa23.96■■□□□ 1.43
SNRPA-205ENST00000598923 PARP10Q53GL7 1025 aa23.96■■□□□ 1.43
SNRPA-205ENST00000598923 PPP1R42Q7Z4L9 355 aa23.96■■□□□ 1.43
SNRPA-205ENST00000598923 L3MBTL3Q96JM7 780 aaPredicted RBP23.96■■□□□ 1.43
SNRPA-205ENST00000598923 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
SNRPA-205ENST00000598923 CCDC30Q5VVM6 783 aa23.95■■□□□ 1.42
SNRPA-205ENST00000598923 SYNE4Q8N205 404 aa23.95■■□□□ 1.42
SNRPA-205ENST00000598923 JMYQ8N9B5 988 aa23.95■■□□□ 1.42
SNRPA-205ENST00000598923 RPGRQ92834 1020 aaKnown RBP23.95■■□□□ 1.42
SNRPA-205ENST00000598923 PSMD1Q99460 953 aa23.95■■□□□ 1.42
SNRPA-205ENST00000598923 HSP90AB3PQ58FF7 597 aa23.94■■□□□ 1.42
SNRPA-205ENST00000598923 CC2D2BQ6DHV5 1058 aa23.94■■□□□ 1.42
SNRPA-205ENST00000598923 ANKRD13DQ6ZTN6 518 aa23.94■■□□□ 1.42
SNRPA-205ENST00000598923 C3orf67Q6ZVT6 689 aa23.94■■□□□ 1.42
SNRPA-205ENST00000598923 CRAMP1Q96RY5 1269 aa23.94■■□□□ 1.42
SNRPA-205ENST00000598923 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
SNRPA-205ENST00000598923 ZNF541Q9H0D2 1346 aa23.93■■□□□ 1.42
SNRPA-205ENST00000598923 FANCIQ9NVI1 1328 aa23.93■■□□□ 1.42
SNRPA-205ENST00000598923 IARSP41252 1262 aaKnown RBP23.93■■□□□ 1.42
SNRPA-205ENST00000598923 TWISTNBQ3B726 338 aaPredicted RBP23.93■■□□□ 1.42
SNRPA-205ENST00000598923 SLC10A5Q5PT55 438 aa23.93■■□□□ 1.42
SNRPA-205ENST00000598923 ZNF428Q96B54 188 aa23.93■■□□□ 1.42
SNRPA-205ENST00000598923 CHMP4AQ9BY43 222 aa23.93■■□□□ 1.42
SNRPA-205ENST00000598923 SPINK5Q9NQ38 1064 aaPredicted RBP23.93■■□□□ 1.42
SNRPA-205ENST00000598923 FZD9O00144 591 aa23.92■■□□□ 1.42
SNRPA-205ENST00000598923 GOLGA2Q08379 1002 aa23.92■■□□□ 1.42
SNRPA-205ENST00000598923 TCIRG1Q13488 830 aa23.92■■□□□ 1.42
SNRPA-205ENST00000598923 IFFO2Q5TF58 517 aa23.92■■□□□ 1.42
SNRPA-205ENST00000598923 PLBD2Q8NHP8 589 aa23.92■■□□□ 1.42
SNRPA-205ENST00000598923 POTEIP0CG38 1075 aa23.91■■□□□ 1.42
SNRPA-205ENST00000598923 POTEJP0CG39 1038 aa23.91■■□□□ 1.42
SNRPA-205ENST00000598923 CHADLQ6NUI6 762 aa23.91■■□□□ 1.42
SNRPA-205ENST00000598923 RIC3Q7Z5B4 369 aa23.91■■□□□ 1.42
SNRPA-205ENST00000598923 RBM17Q96I25 401 aaKnown RBP23.91■■□□□ 1.42
SNRPA-205ENST00000598923 UTP14AQ9BVJ6 771 aaKnown RBP23.91■■□□□ 1.42
SNRPA-205ENST00000598923 COL4A5P29400 1685 aa23.91■■□□□ 1.42
SNRPA-205ENST00000598923 RNF123Q5XPI4 1314 aa23.9■■□□□ 1.42
SNRPA-205ENST00000598923 IQCA1LA6NCM1 817 aa23.9■■□□□ 1.42
SNRPA-205ENST00000598923 EXOSC9Q06265 439 aaKnown RBP23.9■■□□□ 1.42
SNRPA-205ENST00000598923 GRIPAP1Q4V328 841 aa23.9■■□□□ 1.42
SNRPA-205ENST00000598923 MIER1Q8N108 512 aa23.9■■□□□ 1.42
SNRPA-205ENST00000598923 ADAMTSL1Q8N6G6 1762 aa23.9■■□□□ 1.42
SNRPA-205ENST00000598923 NLRP10Q86W26 655 aa23.89■■□□□ 1.41
SNRPA-205ENST00000598923 NLRP3Q96P20 1036 aa23.89■■□□□ 1.41
SNRPA-205ENST00000598923 STK31Q9BXU1 1019 aa23.89■■□□□ 1.41
SNRPA-205ENST00000598923 TAF1DQ9H5J8 278 aaPredicted RBP23.89■■□□□ 1.41
SNRPA-205ENST00000598923 MYH16Q9H6N6 1097 aa23.89■■□□□ 1.41
SNRPA-205ENST00000598923 ATP5J2-PTCD1G3V325 749 aa23.88■■□□□ 1.41
SNRPA-205ENST00000598923 PPEF1O14829 653 aaPredicted RBP23.88■■□□□ 1.41
SNRPA-205ENST00000598923 SLC51AQ86UW1 340 aa23.88■■□□□ 1.41
SNRPA-205ENST00000598923 PCNTO95613 3336 aa23.87■■□□□ 1.41
SNRPA-205ENST00000598923 TRMT112Q9UI30 125 aaKnown RBP23.87■■□□□ 1.41
SNRPA-205ENST00000598923 DDX60Q8IY21 1712 aaKnown RBP23.87■■□□□ 1.41
SNRPA-205ENST00000598923 TAF1P21675 1872 aa23.86■■□□□ 1.41
SNRPA-205ENST00000598923 VAMP4O75379 141 aa23.85■■□□□ 1.41
SNRPA-205ENST00000598923 SLC4A2P04920 1241 aa23.85■■□□□ 1.41
SNRPA-205ENST00000598923 LDHDQ86WU2 507 aa23.85■■□□□ 1.41
SNRPA-205ENST00000598923 GPC2Q8N158 579 aa23.85■■□□□ 1.41
SNRPA-205ENST00000598923 JDP2Q8WYK2 163 aa23.85■■□□□ 1.41
SNRPA-205ENST00000598923 DDX58O95786 925 aaKnown RBP23.84■■□□□ 1.41
SNRPA-205ENST00000598923 MYD88Q99836 296 aa23.84■■□□□ 1.41
SNRPA-205ENST00000598923 HACL1Q9UJ83 578 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms