RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-215	ENST00000598444	SYNE4	Q8N205	404 aa		11.56	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	DNAJC5G	Q8N7S2	189 aa		11.56	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	XAGE3	Q8WTP9	111 aa		11.56	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	PCNT	O95613	3336 aa		11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	APAF1	O14727	1248 aa		11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	DDN	O94850	711 aa	Predicted RBP	11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	NTSR2	O95665	410 aa		11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	HOXA10	P31260	410 aa	Predicted RBP	11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	HTRA3	P83110	453 aa		11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	RBM17	Q96I25	401 aa	Known RBP	11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	CFAP44	Q96MT7	982 aa		11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	UTP14A	Q9BVJ6	771 aa	Known RBP	11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.55	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	TCERG1	O14776	1098 aa	Known RBP	11.54	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	HSP90AB3P	Q58FF7	597 aa		11.54	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	SLC10A5	Q5PT55	438 aa		11.54	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	NLRP3	Q96P20	1036 aa		11.54	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	CHPF2	Q9P2E5	772 aa		11.54	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	RIC1	Q4ADV7	1423 aa		11.53	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	IARS	P41252	1262 aa	Known RBP	11.53	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	TCIRG1	Q13488	830 aa		11.53	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	HDGFL1	Q5TGJ6	251 aa		11.53	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	CC2D2B	Q6DHV5	1058 aa		11.53	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	C3orf67	Q6ZVT6	689 aa		11.53	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	CRAMP1	Q96RY5	1269 aa		11.53	□□□□□ -0.56
ARHGEF1-215	ENST00000598444	HOXB7	P09629	217 aa		11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	DUSP27	Q5VZP5	1158 aa		11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ANKRD13D	Q6ZTN6	518 aa		11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	NLRP10	Q86W26	655 aa		11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	PSMD1	Q99460	953 aa		11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	MBIP	Q9NS73	344 aa		11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	DBF4	Q9UBU7	674 aa	Predicted RBP	11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	TRMT112	Q9UI30	125 aa	Known RBP	11.52	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	PPEF1	O14829	653 aa	Predicted RBP	11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ZNF853	P0CG23	659 aa		11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	HCLS1	P14317	486 aa	Predicted RBP	11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ZEB1	P37275	1124 aa	Predicted RBP	11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	GNAI1	P63096	354 aa		11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	GRIPAP1	Q4V328	841 aa		11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	JDP2	Q8WYK2	163 aa		11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ZNF428	Q96B54	188 aa		11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	KLRG1	Q96E93	195 aa		11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	TMX4	Q9H1E5	349 aa	Predicted RBP	11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	HYPK	Q9NX55	129 aa		11.51	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	DDX60	Q8IY21	1712 aa	Known RBP	11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	IQCA1L	A6NCM1	817 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	FZD9	O00144	591 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ELL2	O00472	640 aa	Predicted RBP	11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	POTEI	P0CG38	1075 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	POTEJ	P0CG39	1038 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	CALD1	Q05682	793 aa	Known RBP	11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	CHADL	Q6NUI6	762 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	PLBD2	Q8NHP8	589 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	IFT57	Q9NWB7	429 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	RNF123	Q5XPI4	1314 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ZNF541	Q9H0D2	1346 aa		11.5	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ATP5J2-PTCD1	G3V325	749 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	BBOX1	O75936	387 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	CCDC184	Q52MB2	194 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	SLC51A	Q86UW1	340 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	LARGE2	Q8N3Y3	721 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ATP6V0A2	Q9Y487	856 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	SH3TC1	Q8TE82	1336 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	SNED1	Q8TER0	1413 aa		11.49	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	CACNA1F	O60840	1977 aa		11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	EIF6	P56537	245 aa	Known RBP	11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	DDX46	Q7L014	1031 aa	Known RBP	11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	GPC2	Q8N158	579 aa		11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ISCA1	Q9BUE6	129 aa		11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	HACL1	Q9UJ83	578 aa		11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	CLEC11A	Q9Y240	323 aa		11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	GJA3	Q9Y6H8	435 aa		11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ABCC4	O15439	1325 aa		11.48	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	COL4A5	P29400	1685 aa		11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	EAPP	Q56P03	285 aa	Predicted RBP	11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	RIC3	Q7Z5B4	369 aa		11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	LDHD	Q86WU2	507 aa		11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	SP8	Q8IXZ3	490 aa		11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	C8orf58	Q8NAV2	365 aa		11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	FAM89A	Q96GI7	184 aa		11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	PHAX	Q9H814	394 aa	Known RBP	11.47	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	PPIP5K2	O43314	1243 aa		11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	EPHX2	P34913	555 aa		11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	TRIM28	Q13263	835 aa	Known RBP	11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	RTL5	Q5HYW3	569 aa	Predicted RBP	11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	NIM1K	Q8IY84	436 aa		11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	JMY	Q8N9B5	988 aa		11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	SUPT20H	Q8NEM7	779 aa		11.46	□□□□□ -0.57
ARHGEF1-215	ENST00000598444	POLR2A	P24928	1970 aa	Known RBP	11.46	□□□□□ -0.58
ARHGEF1-215	ENST00000598444	GOLGA2	Q08379	1002 aa		11.45	□□□□□ -0.58
ARHGEF1-215	ENST00000598444	GRAP	Q13588	217 aa		11.45	□□□□□ -0.58
ARHGEF1-215	ENST00000598444	AOC3	Q16853	763 aa		11.45	□□□□□ -0.58
ARHGEF1-215	ENST00000598444	DPP8	Q6V1X1	898 aa	Predicted RBP	11.45	□□□□□ -0.58
ARHGEF1-215	ENST00000598444	PNMA8A	Q86V59	439 aa	Predicted RBP	11.45	□□□□□ -0.58
ARHGEF1-215	ENST00000598444	MPND	Q8N594	471 aa		11.45	□□□□□ -0.58

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