RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 EAPPQ56P03 285 aaPredicted RBP16.37■□□□□ 0.21
LTBP4-221ENST00000598178 RTKN2Q8IZC4 609 aa16.37■□□□□ 0.21
LTBP4-221ENST00000598178 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
LTBP4-221ENST00000598178 ZNF541Q9H0D2 1346 aa16.37■□□□□ 0.21
LTBP4-221ENST00000598178 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
LTBP4-221ENST00000598178 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
LTBP4-221ENST00000598178 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
LTBP4-221ENST00000598178 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
LTBP4-221ENST00000598178 GPC2Q8N158 579 aa16.36■□□□□ 0.21
LTBP4-221ENST00000598178 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
LTBP4-221ENST00000598178 NIP7Q9Y221 180 aaKnown RBP eCLIP16.36■□□□□ 0.21
LTBP4-221ENST00000598178 GTF2E1P29083 439 aaPredicted RBP16.35■□□□□ 0.21
LTBP4-221ENST00000598178 MLLT1Q03111 559 aaPredicted RBP16.35■□□□□ 0.21
LTBP4-221ENST00000598178 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
LTBP4-221ENST00000598178 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
LTBP4-221ENST00000598178 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
LTBP4-221ENST00000598178 MYL6BP14649 208 aa16.34■□□□□ 0.21
LTBP4-221ENST00000598178 MAP1SQ66K74 1059 aaPredicted RBP16.34■□□□□ 0.21
LTBP4-221ENST00000598178 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
LTBP4-221ENST00000598178 DDX21Q9NR30 783 aaKnown RBP eCLIP16.34■□□□□ 0.21
LTBP4-221ENST00000598178 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
LTBP4-221ENST00000598178 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
LTBP4-221ENST00000598178 TRPM7Q96QT4 1865 aa16.33■□□□□ 0.21
LTBP4-221ENST00000598178 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.2
LTBP4-221ENST00000598178 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
LTBP4-221ENST00000598178 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
LTBP4-221ENST00000598178 PRKRIP1Q9H875 184 aaPredicted RBP16.33■□□□□ 0.2
LTBP4-221ENST00000598178 RRP7AQ9Y3A4 280 aaKnown RBP16.33■□□□□ 0.2
LTBP4-221ENST00000598178 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
LTBP4-221ENST00000598178 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
LTBP4-221ENST00000598178 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
LTBP4-221ENST00000598178 ECE1P42892 770 aa16.32■□□□□ 0.2
LTBP4-221ENST00000598178 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
LTBP4-221ENST00000598178 PSMD1Q99460 953 aa16.32■□□□□ 0.2
LTBP4-221ENST00000598178 ABT1Q9ULW3 272 aaKnown RBP16.32■□□□□ 0.2
LTBP4-221ENST00000598178 BEGAINQ9BUH8 593 aa16.31■□□□□ 0.2
LTBP4-221ENST00000598178 NUP98P52948 1817 aa16.31■□□□□ 0.2
LTBP4-221ENST00000598178 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
LTBP4-221ENST00000598178 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
LTBP4-221ENST00000598178 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
LTBP4-221ENST00000598178 LTBP1Q14766 1721 aa16.3■□□□□ 0.2
LTBP4-221ENST00000598178 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
LTBP4-221ENST00000598178 MAP2K2P36507 400 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 HLFQ16534 295 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 CAPNS2Q96L46 248 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
LTBP4-221ENST00000598178 ZBTB3Q9H5J0 574 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
LTBP4-221ENST00000598178 CCDC85CA6NKD9 419 aa16.28■□□□□ 0.2
LTBP4-221ENST00000598178 CA12O43570 354 aa16.28■□□□□ 0.2
LTBP4-221ENST00000598178 CALD1Q05682 793 aaKnown RBP16.28■□□□□ 0.2
LTBP4-221ENST00000598178 CRY2Q49AN0 593 aa16.28■□□□□ 0.2
LTBP4-221ENST00000598178 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
LTBP4-221ENST00000598178 ADAMTS8Q9UP79 889 aa16.28■□□□□ 0.2
LTBP4-221ENST00000598178 LAS1LQ9Y4W2 734 aaKnown RBP16.28■□□□□ 0.2
LTBP4-221ENST00000598178 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.2
LTBP4-221ENST00000598178 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
LTBP4-221ENST00000598178 TLL2Q9Y6L7 1015 aa16.27■□□□□ 0.2
LTBP4-221ENST00000598178 RIC1Q4ADV7 1423 aa16.27■□□□□ 0.19
LTBP4-221ENST00000598178 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
LTBP4-221ENST00000598178 SCNN1DP51172 638 aa16.26■□□□□ 0.19
LTBP4-221ENST00000598178 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
LTBP4-221ENST00000598178 PARP10Q53GL7 1025 aa16.26■□□□□ 0.19
LTBP4-221ENST00000598178 CST9Q5W186 159 aa16.26■□□□□ 0.19
LTBP4-221ENST00000598178 GIGYF2Q6Y7W6 1299 aaKnown RBP16.26■□□□□ 0.19
LTBP4-221ENST00000598178 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
LTBP4-221ENST00000598178 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
LTBP4-221ENST00000598178 COL4A5P29400 1685 aa16.25■□□□□ 0.19
LTBP4-221ENST00000598178 HOXB7P09629 217 aa16.25■□□□□ 0.19
LTBP4-221ENST00000598178 GPTP24298 496 aa16.25■□□□□ 0.19
LTBP4-221ENST00000598178 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
LTBP4-221ENST00000598178 CYP4F22Q6NT55 531 aa16.25■□□□□ 0.19
LTBP4-221ENST00000598178 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
LTBP4-221ENST00000598178 HHIPL1Q96JK4 782 aa16.25■□□□□ 0.19
LTBP4-221ENST00000598178 CHL1O00533 1208 aa16.24■□□□□ 0.19
LTBP4-221ENST00000598178 TRIM35Q9UPQ4 493 aa16.24■□□□□ 0.19
LTBP4-221ENST00000598178 ABCC12Q96J65 1359 aa16.24■□□□□ 0.19
LTBP4-221ENST00000598178 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
LTBP4-221ENST00000598178 EPS15P42566 896 aa16.23■□□□□ 0.19
LTBP4-221ENST00000598178 HDGFL1Q5TGJ6 251 aa16.23■□□□□ 0.19
LTBP4-221ENST00000598178 NUTM1Q86Y26 1132 aa16.23■□□□□ 0.19
LTBP4-221ENST00000598178 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
LTBP4-221ENST00000598178 CASP8AP2Q9UKL3 1982 aa16.23■□□□□ 0.19
LTBP4-221ENST00000598178 UBN2Q6ZU65 1347 aa16.22■□□□□ 0.19
LTBP4-221ENST00000598178 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
LTBP4-221ENST00000598178 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
LTBP4-221ENST00000598178 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
LTBP4-221ENST00000598178 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
LTBP4-221ENST00000598178 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
LTBP4-221ENST00000598178 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
LTBP4-221ENST00000598178 FMR1Q06787 632 aaKnown RBP eCLIP16.21■□□□□ 0.19
LTBP4-221ENST00000598178 AIMP1Q12904 312 aaKnown RBP16.21■□□□□ 0.19
LTBP4-221ENST00000598178 PDIA6Q15084 440 aa16.21■□□□□ 0.19
LTBP4-221ENST00000598178 PAXIP1Q6ZW49 1069 aaPredicted RBP16.21■□□□□ 0.19
LTBP4-221ENST00000598178 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
LTBP4-221ENST00000598178 TRAF5O00463 557 aa16.2■□□□□ 0.18
LTBP4-221ENST00000598178 NTSR2O95665 410 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms