RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 TAF6LQ9Y6J9 622 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 ZC3H13Q5T200 1668 aaKnown RBP14.72□□□□□ -0.05
USHBP1-207ENST00000597928 ATP10DQ9P241 1426 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 IGSF1Q8N6C5 1336 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 ZNF445P59923 1031 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 ZNF496Q96IT1 587 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-207ENST00000597928 COL9A3Q14050 684 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-207ENST00000597928 RRP12Q5JTH9 1297 aaKnown RBP14.72□□□□□ -0.05
USHBP1-207ENST00000597928 EVI5LQ96CN4 794 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 ATP7BP35670 1465 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 MAP2P11137 1827 aaKnown RBP14.71□□□□□ -0.05
USHBP1-207ENST00000597928 HSP90AA4PQ58FG1 418 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 C16orf45Q96MC5 204 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-207ENST00000597928 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 ZKSCAN5Q9Y2L8 839 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 CCDC192P0DO97 292 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 AKAP4Q5JQC9 854 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 DEPDC5O75140 1603 aa14.71□□□□□ -0.05
USHBP1-207ENST00000597928 DIP2CQ9Y2E4 1556 aa14.71□□□□□ -0.06
USHBP1-207ENST00000597928 RXRAP19793 462 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 TRMT1Q9NXH9 659 aaKnown RBP14.7□□□□□ -0.06
USHBP1-207ENST00000597928 MTMR7Q9Y216 660 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
USHBP1-207ENST00000597928 CDK12Q9NYV4 1490 aaPredicted RBP14.7□□□□□ -0.06
USHBP1-207ENST00000597928 Q6ZUG5 572 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 ZNF589Q86UQ0 364 aaPredicted RBP14.7□□□□□ -0.06
USHBP1-207ENST00000597928 CHMP4AQ9BY43 222 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 PRDM11Q9NQV5 511 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 TBX22Q9Y458 520 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.7□□□□□ -0.06
USHBP1-207ENST00000597928 LMTK2Q8IWU2 1503 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 RAD50Q92878 1312 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 PI4K2BQ8TCG2 481 aa14.7□□□□□ -0.06
USHBP1-207ENST00000597928 PPLO60437 1756 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 GIGYF1O75420 1035 aaPredicted RBP14.69□□□□□ -0.06
USHBP1-207ENST00000597928 FTOQ9C0B1 505 aaKnown RBP eCLIP14.69□□□□□ -0.06
USHBP1-207ENST00000597928 A1BGP04217 495 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 LIG1P18858 919 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 UBE2HP62256 183 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 CBX1P83916 185 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 APOBRQ0VD83 1088 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 LSG1Q9H089 658 aaKnown RBP14.69□□□□□ -0.06
USHBP1-207ENST00000597928 DNAJC25Q9H1X3 360 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 MED14O60244 1454 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 TULP1O00294 542 aaPredicted RBP14.69□□□□□ -0.06
USHBP1-207ENST00000597928 TPM2P07951 284 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 MAP3K11Q16584 847 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 EPHA10Q5JZY3 1008 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 HYPKQ9NX55 129 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 ARHGAP31Q2M1Z3 1444 aa14.69□□□□□ -0.06
USHBP1-207ENST00000597928 CCDC171Q6TFL3 1326 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 GOLGA6L6A8MZA4 724 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 ANAPC15P60006 121 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 SLC27A2O14975 620 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 ANO6Q4KMQ2 910 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 LINS1Q8NG48 757 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.68□□□□□ -0.06
USHBP1-207ENST00000597928 V9GYY5 206 aaPredicted RBP14.68□□□□□ -0.06
USHBP1-207ENST00000597928 CCDC73Q6ZRK6 1079 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 FAM177A1Q8N128 213 aaPredicted RBP14.68□□□□□ -0.06
USHBP1-207ENST00000597928 PIBF1Q8WXW3 757 aa14.68□□□□□ -0.06
USHBP1-207ENST00000597928 ARHGEF28Q8N1W1 1705 aaKnown RBP14.67□□□□□ -0.06
USHBP1-207ENST00000597928 IDH1O75874 414 aaKnown RBP14.67□□□□□ -0.06
USHBP1-207ENST00000597928 HSPA2P54652 639 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 NFXL1Q6ZNB6 911 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 KIAA1210Q9ULL0 1709 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 CRB1P82279 1406 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 OFD1O75665 1012 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 PTGS1P23219 599 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 TPD52L1Q16890 204 aaPredicted RBP14.67□□□□□ -0.06
USHBP1-207ENST00000597928 AMOTQ4VCS5 1084 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 ZNF790Q6PG37 636 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 NEK1Q96PY6 1258 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 OSBPL3Q9H4L5 887 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 CCDC186Q7Z3E2 898 aa14.67□□□□□ -0.06
USHBP1-207ENST00000597928 HELBQ8NG08 1087 aaPredicted RBP14.67□□□□□ -0.06
USHBP1-207ENST00000597928 SIGLEC1Q9BZZ2 1709 aa14.66□□□□□ -0.06
USHBP1-207ENST00000597928 SASH1O94885 1247 aa14.66□□□□□ -0.06
USHBP1-207ENST00000597928 IFIT1P09914 478 aaKnown RBP14.66□□□□□ -0.06
USHBP1-207ENST00000597928 TMX1Q9H3N1 280 aa14.66□□□□□ -0.06
USHBP1-207ENST00000597928 MYO5BQ9ULV0 1848 aa14.66□□□□□ -0.06
USHBP1-207ENST00000597928 TTLL5Q6EMB2 1281 aa14.66□□□□□ -0.06
USHBP1-207ENST00000597928 IQSEC3Q9UPP2 1182 aaPredicted RBP14.66□□□□□ -0.06
USHBP1-207ENST00000597928 PDCP20941 246 aa14.65□□□□□ -0.06
USHBP1-207ENST00000597928 RALYLQ86SE5 291 aaKnown RBP14.65□□□□□ -0.06
USHBP1-207ENST00000597928 NOL7Q9UMY1 257 aaKnown RBP14.65□□□□□ -0.06
USHBP1-207ENST00000597928 ARHGEF10O15013 1369 aa14.65□□□□□ -0.06
USHBP1-207ENST00000597928 RRP9O43818 475 aaKnown RBP14.65□□□□□ -0.06
USHBP1-207ENST00000597928 SMC2O95347 1197 aa14.65□□□□□ -0.06
USHBP1-207ENST00000597928 NOLC1Q14978 699 aaKnown RBP eCLIP14.65□□□□□ -0.06
USHBP1-207ENST00000597928 TTC39AQ5SRH9 613 aa14.65□□□□□ -0.06
USHBP1-207ENST00000597928 ZSCAN31Q96LW9 406 aaPredicted RBP14.65□□□□□ -0.06
USHBP1-207ENST00000597928 PPP1R9BQ96SB3 815 aa14.65□□□□□ -0.06
USHBP1-207ENST00000597928 HTATSF1O43719 755 aaKnown RBP14.65□□□□□ -0.06
USHBP1-207ENST00000597928 SLC4A8Q2Y0W8 1093 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms