RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 MTERF4Q7Z6M4 381 aaKnown RBP10.4□□□□□ -0.74
SIN3B-208ENST00000596638 COL23A1Q86Y22 540 aaPredicted RBP10.4□□□□□ -0.74
SIN3B-208ENST00000596638 RAPGEF4Q8WZA2 1011 aa10.4□□□□□ -0.74
SIN3B-208ENST00000596638 TMX3Q96JJ7 454 aa10.4□□□□□ -0.74
SIN3B-208ENST00000596638 PAPPAQ13219 1627 aa10.4□□□□□ -0.75
SIN3B-208ENST00000596638 KDRP35968 1356 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 CACNA1FO60840 1977 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 SMARCA5O60264 1052 aaPredicted RBP10.39□□□□□ -0.75
SIN3B-208ENST00000596638 PHF14O94880 888 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 NCLP19338 710 aaKnown RBP10.39□□□□□ -0.75
SIN3B-208ENST00000596638 DCTN1Q14203 1278 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 MPRIPQ6WCQ1 1025 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 ZGPATQ8N5A5 531 aaKnown RBP10.39□□□□□ -0.75
SIN3B-208ENST00000596638 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 TMEM87AQ8NBN3 555 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 PIGBQ92521 554 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 TFCP2L1Q9NZI6 479 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 FLT4P35916 1363 aa10.39□□□□□ -0.75
SIN3B-208ENST00000596638 LETM1O95202 739 aaPredicted RBP10.38□□□□□ -0.75
SIN3B-208ENST00000596638 PKP1Q13835 747 aa10.38□□□□□ -0.75
SIN3B-208ENST00000596638 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
SIN3B-208ENST00000596638 LRRCC1Q9C099 1032 aa10.38□□□□□ -0.75
SIN3B-208ENST00000596638 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
SIN3B-208ENST00000596638 TMEM63CQ9P1W3 806 aa10.38□□□□□ -0.75
SIN3B-208ENST00000596638 CCNL1Q9UK58 526 aaPredicted RBP10.38□□□□□ -0.75
SIN3B-208ENST00000596638 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
SIN3B-208ENST00000596638 RAB11FIP3O75154 756 aa10.37□□□□□ -0.75
SIN3B-208ENST00000596638 MX1P20591 662 aa10.37□□□□□ -0.75
SIN3B-208ENST00000596638 CHMLP26374 656 aa10.37□□□□□ -0.75
SIN3B-208ENST00000596638 NEK4P51957 841 aa10.37□□□□□ -0.75
SIN3B-208ENST00000596638 AEBP1Q8IUX7 1158 aa10.37□□□□□ -0.75
SIN3B-208ENST00000596638 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
SIN3B-208ENST00000596638 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
SIN3B-208ENST00000596638 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
SIN3B-208ENST00000596638 DYNC1I1O14576 645 aa10.36□□□□□ -0.75
SIN3B-208ENST00000596638 NLGN2Q8NFZ4 835 aa10.36□□□□□ -0.75
SIN3B-208ENST00000596638 CHMP4AQ9BY43 222 aa10.36□□□□□ -0.75
SIN3B-208ENST00000596638 AK9Q5TCS8 1911 aa10.36□□□□□ -0.75
SIN3B-208ENST00000596638 NCAPD2Q15021 1401 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 KRT24Q2M2I5 525 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 SASS6Q6UVJ0 657 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 MCM10Q7L590 875 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 RTF1Q92541 710 aaKnown RBP10.35□□□□□ -0.75
SIN3B-208ENST00000596638 STK31Q9BXU1 1019 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
SIN3B-208ENST00000596638 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 ASAP1Q9ULH1 1129 aa10.35□□□□□ -0.75
SIN3B-208ENST00000596638 IGSF1Q8N6C5 1336 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 SYCE3A1L190 88 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 PDIA4P13667 645 aaKnown RBP10.34□□□□□ -0.75
SIN3B-208ENST00000596638 PHKG2P15735 406 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 HSPA4P34932 840 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 MSL1Q68DK7 614 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 G2E3Q7L622 706 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 SSH3Q8TE77 659 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
SIN3B-208ENST00000596638 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
SIN3B-208ENST00000596638 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
SIN3B-208ENST00000596638 ITPK1Q13572 414 aa10.33□□□□□ -0.76
SIN3B-208ENST00000596638 MTHFSDQ2M296 383 aaKnown RBP10.33□□□□□ -0.76
SIN3B-208ENST00000596638 ZNF784Q8NCA9 323 aaPredicted RBP10.33□□□□□ -0.76
SIN3B-208ENST00000596638 LINC00116Q8NCU8 138 aa10.33□□□□□ -0.76
SIN3B-208ENST00000596638 ATG3Q9NT62 314 aa10.33□□□□□ -0.76
SIN3B-208ENST00000596638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■□□□□ 11
SIN3B-208ENST00000596638 LY75O60449 1722 aa10.33□□□□□ -0.76
SIN3B-208ENST00000596638 USP42Q9H9J4 1324 aaKnown RBP10.33□□□□□ -0.76
SIN3B-208ENST00000596638 PALLDQ8WX93 1383 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 RPAP1Q9BWH6 1393 aaPredicted RBP10.32□□□□□ -0.76
SIN3B-208ENST00000596638 YBX3P16989 372 aaKnown RBP eCLIP10.32□□□□□ -0.76
SIN3B-208ENST00000596638 FLIIQ13045 1269 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 POLA2Q14181 598 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 CCDC183Q5T5S1 534 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 POTEHQ6S545 545 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 PALD1Q9ULE6 856 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 NSFL1CQ9UNZ2 370 aaKnown RBP10.32□□□□□ -0.76
SIN3B-208ENST00000596638 SPG7Q9UQ90 795 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 DOT1LQ8TEK3 1739 aa10.32□□□□□ -0.76
SIN3B-208ENST00000596638 MAP3K5Q99683 1374 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 TPM3P06753 285 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 SIK1P57059 783 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 HSP90AB4PQ58FF6 505 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 IFNL2Q8IZJ0 200 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 KCNB2Q92953 911 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 PRIMPOLQ96LW4 560 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 ANO2Q9NQ90 1003 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 R3HCC1Q9Y3T6 440 aaKnown RBP10.31□□□□□ -0.76
SIN3B-208ENST00000596638 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
SIN3B-208ENST00000596638 F6X3S4 739 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 APBB1O00213 710 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 SGSM2O43147 1006 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 HOXB7P09629 217 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 POLD1P28340 1107 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 HMGN5P82970 282 aaKnown RBP10.3□□□□□ -0.76
SIN3B-208ENST00000596638 KIAA2012Q0VF49 1180 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 GPR162Q16538 588 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 SLC4A10Q6U841 1118 aa10.3□□□□□ -0.76
SIN3B-208ENST00000596638 VSIG10Q8N0Z9 540 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms