RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 RALBP1Q15311 655 aa21.16■□□□□ 0.98
LIM2-202ENST00000596399 NEUROD2Q15784 382 aa21.16■□□□□ 0.98
LIM2-202ENST00000596399 RPGRQ92834 1020 aaKnown RBP21.16■□□□□ 0.98
LIM2-202ENST00000596399 IQCA1LA6NCM1 817 aa21.15■□□□□ 0.98
LIM2-202ENST00000596399 FZD9O00144 591 aa21.15■□□□□ 0.98
LIM2-202ENST00000596399 HOXA10P31260 410 aaPredicted RBP21.15■□□□□ 0.98
LIM2-202ENST00000596399 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
LIM2-202ENST00000596399 EAPPQ56P03 285 aaPredicted RBP21.15■□□□□ 0.98
LIM2-202ENST00000596399 MKRN1Q9UHC7 482 aaKnown RBP21.15■□□□□ 0.98
LIM2-202ENST00000596399 RNF123Q5XPI4 1314 aa21.14■□□□□ 0.97
LIM2-202ENST00000596399 SCN4AP35499 1836 aa21.13■□□□□ 0.97
LIM2-202ENST00000596399 ERBB4Q15303 1308 aa21.13■□□□□ 0.97
LIM2-202ENST00000596399 HSPA1AP0DMV8 641 aaKnown RBP21.13■□□□□ 0.97
LIM2-202ENST00000596399 HSPA1BP0DMV9 641 aaKnown RBP21.13■□□□□ 0.97
LIM2-202ENST00000596399 LDHDQ86WU2 507 aa21.13■□□□□ 0.97
LIM2-202ENST00000596399 ZNF428Q96B54 188 aa21.13■□□□□ 0.97
LIM2-202ENST00000596399 PSMD1Q99460 953 aa21.13■□□□□ 0.97
LIM2-202ENST00000596399 CREBZFQ9NS37 354 aa21.13■□□□□ 0.97
LIM2-202ENST00000596399 RIC1Q4ADV7 1423 aa21.12■□□□□ 0.97
LIM2-202ENST00000596399 IBTKQ9P2D0 1353 aaPredicted RBP21.12■□□□□ 0.97
LIM2-202ENST00000596399 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
LIM2-202ENST00000596399 RBM17Q96I25 401 aaKnown RBP21.12■□□□□ 0.97
LIM2-202ENST00000596399 HACL1Q9UJ83 578 aa21.12■□□□□ 0.97
LIM2-202ENST00000596399 PASKQ96RG2 1323 aa21.11■□□□□ 0.97
LIM2-202ENST00000596399 PPEF1O14829 653 aaPredicted RBP21.11■□□□□ 0.97
LIM2-202ENST00000596399 ITGBL1O95965 494 aaPredicted RBP21.11■□□□□ 0.97
LIM2-202ENST00000596399 EPHX2P34913 555 aa21.11■□□□□ 0.97
LIM2-202ENST00000596399 PPP1R42Q7Z4L9 355 aa21.11■□□□□ 0.97
LIM2-202ENST00000596399 CLEC11AQ9Y240 323 aa21.11■□□□□ 0.97
LIM2-202ENST00000596399 COPS6Q7L5N1 327 aa21.1■□□□□ 0.97
LIM2-202ENST00000596399 XAGE3Q8WTP9 111 aa21.1■□□□□ 0.97
LIM2-202ENST00000596399 JDP2Q8WYK2 163 aa21.1■□□□□ 0.97
LIM2-202ENST00000596399 CRAMP1Q96RY5 1269 aa21.1■□□□□ 0.97
LIM2-202ENST00000596399 LAS1LQ9Y4W2 734 aaKnown RBP21.1■□□□□ 0.97
LIM2-202ENST00000596399 GJA3Q9Y6H8 435 aa21.1■□□□□ 0.97
LIM2-202ENST00000596399 MYBBP1AQ9BQG0 1328 aaKnown RBP21.09■□□□□ 0.97
LIM2-202ENST00000596399 PARP10Q53GL7 1025 aa21.09■□□□□ 0.97
LIM2-202ENST00000596399 MAP1SQ66K74 1059 aaPredicted RBP21.09■□□□□ 0.97
LIM2-202ENST00000596399 GPC2Q8N158 579 aa21.09■□□□□ 0.97
LIM2-202ENST00000596399 UTP14AQ9BVJ6 771 aaKnown RBP21.09■□□□□ 0.97
LIM2-202ENST00000596399 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
LIM2-202ENST00000596399 ADAMTSL1Q8N6G6 1762 aa21.08■□□□□ 0.97
LIM2-202ENST00000596399 CC2D2BQ6DHV5 1058 aa21.08■□□□□ 0.97
LIM2-202ENST00000596399 LARGE2Q8N3Y3 721 aa21.08■□□□□ 0.97
LIM2-202ENST00000596399 NLRP3Q96P20 1036 aa21.08■□□□□ 0.97
LIM2-202ENST00000596399 BABAM1Q9NWV8 329 aa21.08■□□□□ 0.97
LIM2-202ENST00000596399 HCLS1P14317 486 aaPredicted RBP21.07■□□□□ 0.96
LIM2-202ENST00000596399 LMOD3Q0VAK6 560 aa21.07■□□□□ 0.96
LIM2-202ENST00000596399 LTBP1Q14766 1721 aa21.07■□□□□ 0.96
LIM2-202ENST00000596399 ABCC4O15439 1325 aa21.06■□□□□ 0.96
LIM2-202ENST00000596399 CHL1O00533 1208 aa21.06■□□□□ 0.96
LIM2-202ENST00000596399 CAPN15O75808 1086 aa21.06■□□□□ 0.96
LIM2-202ENST00000596399 SLC10A5Q5PT55 438 aa21.06■□□□□ 0.96
LIM2-202ENST00000596399 NLRP10Q86W26 655 aa21.06■□□□□ 0.96
LIM2-202ENST00000596399 ADAMTS8Q9UP79 889 aa21.06■□□□□ 0.96
LIM2-202ENST00000596399 EIF6P56537 245 aaKnown RBP21.05■□□□□ 0.96
LIM2-202ENST00000596399 TNS4Q8IZW8 715 aa21.05■□□□□ 0.96
LIM2-202ENST00000596399 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
LIM2-202ENST00000596399 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
LIM2-202ENST00000596399 EPS15P42566 896 aa21.04■□□□□ 0.96
LIM2-202ENST00000596399 FMR1Q06787 632 aaKnown RBP eCLIP21.04■□□□□ 0.96
LIM2-202ENST00000596399 AOC3Q16853 763 aa21.04■□□□□ 0.96
LIM2-202ENST00000596399 PNMA8AQ86V59 439 aaPredicted RBP21.04■□□□□ 0.96
LIM2-202ENST00000596399 CNTROBQ8N137 903 aa21.04■□□□□ 0.96
LIM2-202ENST00000596399 DDX21Q9NR30 783 aaKnown RBP eCLIP21.04■□□□□ 0.96
LIM2-202ENST00000596399 ATP6V0A2Q9Y487 856 aa21.04■□□□□ 0.96
LIM2-202ENST00000596399 CNTNAP1P78357 1384 aa21.04■□□□□ 0.96
LIM2-202ENST00000596399 LAMB2P55268 1798 aa21.04■□□□□ 0.96
LIM2-202ENST00000596399 ANKRD36CQ5JPF3 1778 aa21.03■□□□□ 0.96
LIM2-202ENST00000596399 TMEM88BA6NKF7 163 aa21.03■□□□□ 0.96
LIM2-202ENST00000596399 VEGFBP49765 207 aa21.03■□□□□ 0.96
LIM2-202ENST00000596399 SCNN1DP51172 638 aa21.03■□□□□ 0.96
LIM2-202ENST00000596399 TCIRG1Q13488 830 aa21.03■□□□□ 0.96
LIM2-202ENST00000596399 TRMT112Q9UI30 125 aaKnown RBP21.03■□□□□ 0.96
LIM2-202ENST00000596399 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
LIM2-202ENST00000596399 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.96
LIM2-202ENST00000596399 TAF1P21675 1872 aa21.01■□□□□ 0.95
LIM2-202ENST00000596399 NIM1KQ8IY84 436 aa21.01■□□□□ 0.95
LIM2-202ENST00000596399 GRIPAP1Q4V328 841 aa21■□□□□ 0.95
LIM2-202ENST00000596399 HSP90AB3PQ58FF7 597 aa21■□□□□ 0.95
LIM2-202ENST00000596399 HDGFL1Q5TGJ6 251 aa21■□□□□ 0.95
LIM2-202ENST00000596399 LMOD1P29536 600 aaPredicted RBP20.99■□□□□ 0.95
LIM2-202ENST00000596399 SH3TC1Q8TE82 1336 aa20.99■□□□□ 0.95
LIM2-202ENST00000596399 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
LIM2-202ENST00000596399 FOXN1O15353 648 aa20.98■□□□□ 0.95
LIM2-202ENST00000596399 CXCL9Q07325 125 aa20.98■□□□□ 0.95
LIM2-202ENST00000596399 SP8Q8IXZ3 490 aa20.98■□□□□ 0.95
LIM2-202ENST00000596399 TMX4Q9H1E5 349 aaPredicted RBP20.98■□□□□ 0.95
LIM2-202ENST00000596399 BBOX1O75936 387 aa20.97■□□□□ 0.95
LIM2-202ENST00000596399 RTL5Q5HYW3 569 aaPredicted RBP20.97■□□□□ 0.95
LIM2-202ENST00000596399 DPP8Q6V1X1 898 aaPredicted RBP20.97■□□□□ 0.95
LIM2-202ENST00000596399 FAM89AQ96GI7 184 aa20.97■□□□□ 0.95
LIM2-202ENST00000596399 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
LIM2-202ENST00000596399 MBIPQ9NS73 344 aa20.97■□□□□ 0.95
LIM2-202ENST00000596399 TRAF5O00463 557 aa20.96■□□□□ 0.95
LIM2-202ENST00000596399 GRAPQ13588 217 aa20.96■□□□□ 0.95
LIM2-202ENST00000596399 DUSP27Q5VZP5 1158 aa20.96■□□□□ 0.95
LIM2-202ENST00000596399 ANKRD13DQ6ZTN6 518 aa20.96■□□□□ 0.95
LIM2-202ENST00000596399 DDX46Q7L014 1031 aaKnown RBP20.96■□□□□ 0.95
LIM2-202ENST00000596399 MPNDQ8N594 471 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms