RNA–Protein interactions for RNA: ENST00000596319.1

SAMD4B-205, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 2

Gene SAMD4B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-205ENST00000596319 HOXA10P31260 410 aaPredicted RBP13.62□□□□□ -0.23
SAMD4B-205ENST00000596319 PARP10Q53GL7 1025 aa13.62□□□□□ -0.23
SAMD4B-205ENST00000596319 CC2D2BQ6DHV5 1058 aa13.62□□□□□ -0.23
SAMD4B-205ENST00000596319 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
SAMD4B-205ENST00000596319 DDNO94850 711 aaPredicted RBP13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 NTSR2O95665 410 aa13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 HTRA3P83110 453 aa13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
SAMD4B-205ENST00000596319 NEUROD2Q15784 382 aa13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 GRIPAP1Q4V328 841 aa13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 SLC10A5Q5PT55 438 aa13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 JMYQ8N9B5 988 aa13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 RPGRQ92834 1020 aaKnown RBP13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 CRAMP1Q96RY5 1269 aa13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 PSMD1Q99460 953 aa13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 ZNF277Q9NRM2 450 aaPredicted RBP13.6□□□□□ -0.23
SAMD4B-205ENST00000596319 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 ANXA1P04083 346 aa13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 SYNE4Q8N205 404 aa13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
SAMD4B-205ENST00000596319 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
SAMD4B-205ENST00000596319 FZD9O00144 591 aa13.58□□□□□ -0.24
SAMD4B-205ENST00000596319 HSP90AB3PQ58FF7 597 aa13.58□□□□□ -0.24
SAMD4B-205ENST00000596319 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
SAMD4B-205ENST00000596319 NLRP3Q96P20 1036 aa13.58□□□□□ -0.24
SAMD4B-205ENST00000596319 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.24
SAMD4B-205ENST00000596319 HOXB7P09629 217 aa13.57□□□□□ -0.24
SAMD4B-205ENST00000596319 TCIRG1Q13488 830 aa13.57□□□□□ -0.24
SAMD4B-205ENST00000596319 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
SAMD4B-205ENST00000596319 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
SAMD4B-205ENST00000596319 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
SAMD4B-205ENST00000596319 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
SAMD4B-205ENST00000596319 SCN4AP35499 1836 aa13.57□□□□□ -0.24
SAMD4B-205ENST00000596319 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
SAMD4B-205ENST00000596319 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
SAMD4B-205ENST00000596319 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
SAMD4B-205ENST00000596319 LAS1LQ9Y4W2 734 aaKnown RBP13.56□□□□□ -0.24
SAMD4B-205ENST00000596319 ZNF541Q9H0D2 1346 aa13.56□□□□□ -0.24
SAMD4B-205ENST00000596319 PPEF1O14829 653 aaPredicted RBP13.55□□□□□ -0.24
SAMD4B-205ENST00000596319 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
SAMD4B-205ENST00000596319 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
SAMD4B-205ENST00000596319 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
SAMD4B-205ENST00000596319 NLRP10Q86W26 655 aa13.55□□□□□ -0.24
SAMD4B-205ENST00000596319 LDHDQ86WU2 507 aa13.55□□□□□ -0.24
SAMD4B-205ENST00000596319 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
SAMD4B-205ENST00000596319 HDGFL1Q5TGJ6 251 aa13.54□□□□□ -0.24
SAMD4B-205ENST00000596319 GPC2Q8N158 579 aa13.54□□□□□ -0.24
SAMD4B-205ENST00000596319 VPS33BQ9H267 617 aa13.54□□□□□ -0.24
SAMD4B-205ENST00000596319 CHPF2Q9P2E5 772 aa13.54□□□□□ -0.24
SAMD4B-205ENST00000596319 DBF4Q9UBU7 674 aaPredicted RBP13.54□□□□□ -0.24
SAMD4B-205ENST00000596319 HACL1Q9UJ83 578 aa13.54□□□□□ -0.24
SAMD4B-205ENST00000596319 BBOX1O75936 387 aa13.53□□□□□ -0.24
SAMD4B-205ENST00000596319 ZNF853P0CG23 659 aa13.53□□□□□ -0.24
SAMD4B-205ENST00000596319 PLBD2Q8NHP8 589 aa13.53□□□□□ -0.24
SAMD4B-205ENST00000596319 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
SAMD4B-205ENST00000596319 TRMT112Q9UI30 125 aaKnown RBP13.53□□□□□ -0.24
SAMD4B-205ENST00000596319 ATP6V0A2Q9Y487 856 aa13.53□□□□□ -0.24
SAMD4B-205ENST00000596319 SH3TC1Q8TE82 1336 aa13.53□□□□□ -0.24
SAMD4B-205ENST00000596319 APAF1O14727 1248 aa13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 EPHX2P34913 555 aa13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 EIF6P56537 245 aaKnown RBP13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 DUSP27Q5VZP5 1158 aa13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 ANKRD13DQ6ZTN6 518 aa13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 PNMA8AQ86V59 439 aaPredicted RBP13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 LARGE2Q8N3Y3 721 aa13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 TMX4Q9H1E5 349 aaPredicted RBP13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 MBIPQ9NS73 344 aa13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 HYPKQ9NX55 129 aa13.52□□□□□ -0.25
SAMD4B-205ENST00000596319 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 ABCC4O15439 1325 aa13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 TCERG1O14776 1098 aaKnown RBP13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 SP8Q8IXZ3 490 aa13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 ISCA1Q9BUE6 129 aa13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 IFT57Q9NWB7 429 aa13.51□□□□□ -0.25
SAMD4B-205ENST00000596319 COL4A5P29400 1685 aa13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 ITGBL1O95965 494 aaPredicted RBP13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 GNAI1P63096 354 aa13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 TRIM28Q13263 835 aaKnown RBP13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 EAPPQ56P03 285 aaPredicted RBP13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
SAMD4B-205ENST00000596319 PPIP5K2O43314 1243 aa13.49□□□□□ -0.25
SAMD4B-205ENST00000596319 GRAPQ13588 217 aa13.49□□□□□ -0.25
SAMD4B-205ENST00000596319 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms