RNA–Protein interactions for RNA: ENST00000594597.5

GRAMD1A-204, Transcript of GRAM domain containing 1A, humanhuman

TSL 4

Gene GRAMD1A, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-204ENST00000594597 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
GRAMD1A-204ENST00000594597 SLX4Q8IY92 1834 aa13.4□□□□□ -0.26
GRAMD1A-204ENST00000594597 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
GRAMD1A-204ENST00000594597 POTECB2RU33 542 aa13.39□□□□□ -0.27
GRAMD1A-204ENST00000594597 CHL1O00533 1208 aa13.39□□□□□ -0.27
GRAMD1A-204ENST00000594597 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
GRAMD1A-204ENST00000594597 RASSF7Q02833 373 aa13.39□□□□□ -0.27
GRAMD1A-204ENST00000594597 ERFEQ4G0M1 354 aa13.39□□□□□ -0.27
GRAMD1A-204ENST00000594597 RPGRQ92834 1020 aaKnown RBP13.39□□□□□ -0.27
GRAMD1A-204ENST00000594597 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
GRAMD1A-204ENST00000594597 CCDC146Q8IYE0 955 aa13.38□□□□□ -0.27
GRAMD1A-204ENST00000594597 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
GRAMD1A-204ENST00000594597 NFKBIEO00221 500 aa13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 GNAI1P63096 354 aa13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 HLFQ16534 295 aa13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 LAS1LQ9Y4W2 734 aaKnown RBP13.37□□□□□ -0.27
GRAMD1A-204ENST00000594597 IQCA1LA6NCM1 817 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 FAM177BA6PVY3 158 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 CRY2Q49AN0 593 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 HDGFL1Q5TGJ6 251 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 TTLL7Q6ZT98 887 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 ZNF34Q8IZ26 560 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 NLRP3Q96P20 1036 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 IFT57Q9NWB7 429 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 HYPKQ9NX55 129 aa13.36□□□□□ -0.27
GRAMD1A-204ENST00000594597 SCN4AP35499 1836 aa13.35□□□□□ -0.27
GRAMD1A-204ENST00000594597 CHADLQ6NUI6 762 aa13.35□□□□□ -0.27
GRAMD1A-204ENST00000594597 CRAMP1Q96RY5 1269 aa13.35□□□□□ -0.27
GRAMD1A-204ENST00000594597 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
GRAMD1A-204ENST00000594597 TRIM35Q9UPQ4 493 aa13.35□□□□□ -0.27
GRAMD1A-204ENST00000594597 ANP32CO43423 234 aa13.34□□□□□ -0.27
GRAMD1A-204ENST00000594597 GPTP24298 496 aa13.34□□□□□ -0.27
GRAMD1A-204ENST00000594597 HOXA10P31260 410 aaPredicted RBP13.34□□□□□ -0.27
GRAMD1A-204ENST00000594597 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
GRAMD1A-204ENST00000594597 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
GRAMD1A-204ENST00000594597 COPS6Q7L5N1 327 aa13.33□□□□□ -0.28
GRAMD1A-204ENST00000594597 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
GRAMD1A-204ENST00000594597 PLBD2Q8NHP8 589 aa13.33□□□□□ -0.28
GRAMD1A-204ENST00000594597 C7orf43Q8WVR3 580 aa13.33□□□□□ -0.28
GRAMD1A-204ENST00000594597 JDP2Q8WYK2 163 aa13.33□□□□□ -0.28
GRAMD1A-204ENST00000594597 PSMD1Q99460 953 aa13.33□□□□□ -0.28
GRAMD1A-204ENST00000594597 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 APAF1O14727 1248 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 NTSR2O95665 410 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 TCIRG1Q13488 830 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 PDIA6Q15084 440 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 SLC10A5Q5PT55 438 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 SUSD4Q5VX71 490 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 SUPT20HQ8NEM7 779 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 XAGE3Q8WTP9 111 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 UBN2Q6ZU65 1347 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 SH3TC1Q8TE82 1336 aa13.32□□□□□ -0.28
GRAMD1A-204ENST00000594597 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 MAP2K1Q02750 393 aaPredicted RBP13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 AIMP1Q12904 312 aaKnown RBP13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 CCDC27Q2M243 656 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 LRP10Q7Z4F1 713 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 ABCC12Q96J65 1359 aa13.31□□□□□ -0.28
GRAMD1A-204ENST00000594597 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
GRAMD1A-204ENST00000594597 BBOX1O75936 387 aa13.3□□□□□ -0.28
GRAMD1A-204ENST00000594597 IARSP41252 1262 aaKnown RBP13.3□□□□□ -0.28
GRAMD1A-204ENST00000594597 PRPF38BQ5VTL8 546 aaKnown RBP13.3□□□□□ -0.28
GRAMD1A-204ENST00000594597 CHPF2Q9P2E5 772 aa13.3□□□□□ -0.28
GRAMD1A-204ENST00000594597 TRMT112Q9UI30 125 aaKnown RBP13.3□□□□□ -0.28
GRAMD1A-204ENST00000594597 TMEM88BA6NKF7 163 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 EIF6P56537 245 aaKnown RBP13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 CCDC30Q5VVM6 783 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 DDX46Q7L014 1031 aaKnown RBP13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 NLRP10Q86W26 655 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 MCOLN1Q9GZU1 580 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 PASKQ96RG2 1323 aa13.29□□□□□ -0.28
GRAMD1A-204ENST00000594597 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
GRAMD1A-204ENST00000594597 PNMA8AQ86V59 439 aaPredicted RBP13.28□□□□□ -0.28
GRAMD1A-204ENST00000594597 SYNE4Q8N205 404 aa13.28□□□□□ -0.28
GRAMD1A-204ENST00000594597 LAMB2P55268 1798 aa13.27□□□□□ -0.28
GRAMD1A-204ENST00000594597 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.28
GRAMD1A-204ENST00000594597 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
GRAMD1A-204ENST00000594597 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
GRAMD1A-204ENST00000594597 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
GRAMD1A-204ENST00000594597 GPC2Q8N158 579 aa13.27□□□□□ -0.29
GRAMD1A-204ENST00000594597 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
GRAMD1A-204ENST00000594597 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms