RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 CRY2Q49AN0 593 aa14.29□□□□□ -0.12
XRCC1-204ENST00000594511 NLGN2Q8NFZ4 835 aa14.29□□□□□ -0.12
XRCC1-204ENST00000594511 MYD88Q99836 296 aa14.29□□□□□ -0.12
XRCC1-204ENST00000594511 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
XRCC1-204ENST00000594511 PDE6BP35913 854 aa14.28□□□□□ -0.12
XRCC1-204ENST00000594511 BRCA1P38398 1863 aaKnown RBP14.28□□□□□ -0.12
XRCC1-204ENST00000594511 ZBTB38Q8NAP3 1195 aaPredicted RBP14.28□□□□□ -0.12
XRCC1-204ENST00000594511 DLEC1Q9Y238 1755 aa14.27□□□□□ -0.12
XRCC1-204ENST00000594511 ABCC12Q96J65 1359 aa14.27□□□□□ -0.12
XRCC1-204ENST00000594511 SH3TC1Q8TE82 1336 aa14.27□□□□□ -0.12
XRCC1-204ENST00000594511 KIF16BQ96L93 1317 aa14.27□□□□□ -0.12
XRCC1-204ENST00000594511 F6X3S4 739 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 H7C1W4 665 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 BCAR3O75815 825 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 ALDH1L1O75891 902 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 CASP7P55210 303 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 ST5P78524 1137 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 NEXNQ0ZGT2 675 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 GCKRQ14397 625 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 ERFEQ4G0M1 354 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 BCL2L13Q9BXK5 485 aa14.27□□□□□ -0.13
XRCC1-204ENST00000594511 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.13
XRCC1-204ENST00000594511 NOB1Q9ULX3 412 aaKnown RBP14.27□□□□□ -0.13
XRCC1-204ENST00000594511 CDHR2Q9BYE9 1310 aa14.26□□□□□ -0.13
XRCC1-204ENST00000594511 SRGNP10124 158 aa14.26□□□□□ -0.13
XRCC1-204ENST00000594511 DPEP1P16444 411 aa14.26□□□□□ -0.13
XRCC1-204ENST00000594511 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
XRCC1-204ENST00000594511 NUTM1Q86Y26 1132 aa14.26□□□□□ -0.13
XRCC1-204ENST00000594511 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
XRCC1-204ENST00000594511 N4BP2Q86UW6 1770 aaPredicted RBP14.26□□□□□ -0.13
XRCC1-204ENST00000594511 UTYO14607 1347 aa14.25□□□□□ -0.13
XRCC1-204ENST00000594511 IPO8O15397 1037 aaKnown RBP14.25□□□□□ -0.13
XRCC1-204ENST00000594511 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
XRCC1-204ENST00000594511 STYK1Q6J9G0 422 aa14.25□□□□□ -0.13
XRCC1-204ENST00000594511 SYNE4Q8N205 404 aa14.25□□□□□ -0.13
XRCC1-204ENST00000594511 PLA2G12BQ9BX93 195 aa14.25□□□□□ -0.13
XRCC1-204ENST00000594511 API5Q9BZZ5 524 aaKnown RBP14.25□□□□□ -0.13
XRCC1-204ENST00000594511 DDX60Q8IY21 1712 aaKnown RBP14.24□□□□□ -0.13
XRCC1-204ENST00000594511 A0A0G2JLW4 131 aa14.24□□□□□ -0.13
XRCC1-204ENST00000594511 SF3B3Q15393 1217 aaKnown RBP14.24□□□□□ -0.13
XRCC1-204ENST00000594511 CCDC24Q8N4L8 307 aa14.24□□□□□ -0.13
XRCC1-204ENST00000594511 FAM89AQ96GI7 184 aa14.24□□□□□ -0.13
XRCC1-204ENST00000594511 LAMB2P55268 1798 aa14.24□□□□□ -0.13
XRCC1-204ENST00000594511 COL11A2P13942 1736 aaPredicted RBP14.24□□□□□ -0.13
XRCC1-204ENST00000594511 TNRC6CQ9HCJ0 1690 aaKnown RBP14.23□□□□□ -0.13
XRCC1-204ENST00000594511 ABCC4O15439 1325 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 H0YIN7 160 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 TRIM27P14373 513 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 HSP90B1P14625 803 aaKnown RBP14.23□□□□□ -0.13
XRCC1-204ENST00000594511 GTF2E1P29083 439 aaPredicted RBP14.23□□□□□ -0.13
XRCC1-204ENST00000594511 CHRNA5P30532 468 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 INTS3Q68E01 1043 aaKnown RBP14.23□□□□□ -0.13
XRCC1-204ENST00000594511 ATF7IPQ6VMQ6 1270 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 C2CD5Q86YS7 1000 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 NLRP3Q96P20 1036 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
XRCC1-204ENST00000594511 IRS4O14654 1257 aaPredicted RBP14.22□□□□□ -0.13
XRCC1-204ENST00000594511 NPR1P16066 1061 aa14.22□□□□□ -0.13
XRCC1-204ENST00000594511 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
XRCC1-204ENST00000594511 MASTLQ96GX5 879 aa14.22□□□□□ -0.13
XRCC1-204ENST00000594511 CRAMP1Q96RY5 1269 aa14.22□□□□□ -0.13
XRCC1-204ENST00000594511 RCAN3Q9UKA8 241 aa14.22□□□□□ -0.13
XRCC1-204ENST00000594511 ARFGEF1Q9Y6D6 1849 aa14.21□□□□□ -0.13
XRCC1-204ENST00000594511 PDE8AO60658 829 aa14.21□□□□□ -0.13
XRCC1-204ENST00000594511 CCT4P50991 539 aaKnown RBP14.21□□□□□ -0.13
XRCC1-204ENST00000594511 ZKSCAN2Q63HK3 967 aa14.21□□□□□ -0.13
XRCC1-204ENST00000594511 C7orf43Q8WVR3 580 aa14.21□□□□□ -0.13
XRCC1-204ENST00000594511 USP44Q9H0E7 712 aa14.21□□□□□ -0.13
XRCC1-204ENST00000594511 GRM8O00222 908 aa14.2□□□□□ -0.14
XRCC1-204ENST00000594511 CSF1RP07333 972 aa14.2□□□□□ -0.14
XRCC1-204ENST00000594511 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
XRCC1-204ENST00000594511 TTLL6Q8N841 843 aa14.2□□□□□ -0.14
XRCC1-204ENST00000594511 CNKSR1Q969H4 720 aa14.2□□□□□ -0.14
XRCC1-204ENST00000594511 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
XRCC1-204ENST00000594511 RTL9Q8NET4 1388 aa14.2□□□□□ -0.14
XRCC1-204ENST00000594511 NPHP1O15259 732 aa14.19□□□□□ -0.14
XRCC1-204ENST00000594511 YBX3P16989 372 aaKnown RBP eCLIP14.19□□□□□ -0.14
XRCC1-204ENST00000594511 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
XRCC1-204ENST00000594511 DALRD3Q5D0E6 543 aaKnown RBP14.19□□□□□ -0.14
XRCC1-204ENST00000594511 SLC4A10Q6U841 1118 aa14.19□□□□□ -0.14
XRCC1-204ENST00000594511 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
XRCC1-204ENST00000594511 SLX4Q8IY92 1834 aa14.18□□□□□ -0.14
XRCC1-204ENST00000594511 FOXO4P98177 505 aa14.18□□□□□ -0.14
XRCC1-204ENST00000594511 UBE3BQ7Z3V4 1068 aa14.18□□□□□ -0.14
XRCC1-204ENST00000594511 TTLL11Q8NHH1 800 aa14.18□□□□□ -0.14
XRCC1-204ENST00000594511 KAZALD1Q96I82 304 aa14.18□□□□□ -0.14
XRCC1-204ENST00000594511 TNNQ9UQP3 1299 aa14.18□□□□□ -0.14
XRCC1-204ENST00000594511 MYH3P11055 1940 aa14.17□□□□□ -0.14
XRCC1-204ENST00000594511 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
XRCC1-204ENST00000594511 JARID2Q92833 1246 aaPredicted RBP14.17□□□□□ -0.14
XRCC1-204ENST00000594511 RBM17Q96I25 401 aaKnown RBP14.17□□□□□ -0.14
XRCC1-204ENST00000594511 SNED1Q8TER0 1413 aa14.16□□□□□ -0.14
XRCC1-204ENST00000594511 GRIN3BO60391 1043 aa14.16□□□□□ -0.14
XRCC1-204ENST00000594511 BBOX1O75936 387 aa14.16□□□□□ -0.14
XRCC1-204ENST00000594511 CTSWP56202 376 aa14.16□□□□□ -0.14
XRCC1-204ENST00000594511 RABL6Q3YEC7 729 aaPredicted RBP14.16□□□□□ -0.14
XRCC1-204ENST00000594511 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
XRCC1-204ENST00000594511 FRAT1Q92837 279 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms