RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 RTKN2Q8IZC4 609 aa16.33■□□□□ 0.2
SIN3B-204ENST00000594372 ABT1Q9ULW3 272 aaKnown RBP16.33■□□□□ 0.2
SIN3B-204ENST00000594372 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.2
SIN3B-204ENST00000594372 ANKRD36CQ5JPF3 1778 aa16.33■□□□□ 0.2
SIN3B-204ENST00000594372 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.2
SIN3B-204ENST00000594372 CTCFP49711 727 aaPredicted RBP16.32■□□□□ 0.2
SIN3B-204ENST00000594372 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
SIN3B-204ENST00000594372 TRAF5O00463 557 aa16.31■□□□□ 0.2
SIN3B-204ENST00000594372 HSPA8P11142 646 aaKnown RBP16.31■□□□□ 0.2
SIN3B-204ENST00000594372 EPS15P42566 896 aa16.31■□□□□ 0.2
SIN3B-204ENST00000594372 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
SIN3B-204ENST00000594372 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
SIN3B-204ENST00000594372 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
SIN3B-204ENST00000594372 WBP1LQ9NX94 342 aa16.31■□□□□ 0.2
SIN3B-204ENST00000594372 THSD7BQ9C0I4 1608 aa16.3■□□□□ 0.2
SIN3B-204ENST00000594372 WDR33Q9C0J8 1336 aaKnown RBP16.3■□□□□ 0.2
SIN3B-204ENST00000594372 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
SIN3B-204ENST00000594372 DEFB115Q30KQ5 88 aa16.3■□□□□ 0.2
SIN3B-204ENST00000594372 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
SIN3B-204ENST00000594372 GPC2Q8N158 579 aa16.3■□□□□ 0.2
SIN3B-204ENST00000594372 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
SIN3B-204ENST00000594372 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
SIN3B-204ENST00000594372 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
SIN3B-204ENST00000594372 RASSF10A6NK89 507 aa16.29■□□□□ 0.2
SIN3B-204ENST00000594372 SCNN1DP51172 638 aa16.29■□□□□ 0.2
SIN3B-204ENST00000594372 CRY2Q49AN0 593 aa16.29■□□□□ 0.2
SIN3B-204ENST00000594372 LARGE2Q8N3Y3 721 aa16.29■□□□□ 0.2
SIN3B-204ENST00000594372 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
SIN3B-204ENST00000594372 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
SIN3B-204ENST00000594372 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
SIN3B-204ENST00000594372 ANXA1P04083 346 aa16.28■□□□□ 0.2
SIN3B-204ENST00000594372 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
SIN3B-204ENST00000594372 CYP4F22Q6NT55 531 aa16.28■□□□□ 0.2
SIN3B-204ENST00000594372 PSMD1Q99460 953 aa16.28■□□□□ 0.2
SIN3B-204ENST00000594372 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
SIN3B-204ENST00000594372 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
SIN3B-204ENST00000594372 KIF6Q6ZMV9 814 aa16.27■□□□□ 0.2
SIN3B-204ENST00000594372 PNMA8AQ86V59 439 aaPredicted RBP16.27■□□□□ 0.2
SIN3B-204ENST00000594372 RIC1Q4ADV7 1423 aa16.27■□□□□ 0.19
SIN3B-204ENST00000594372 NTSR2O95665 410 aa16.26■□□□□ 0.19
SIN3B-204ENST00000594372 LMOD1P29536 600 aaPredicted RBP16.26■□□□□ 0.19
SIN3B-204ENST00000594372 AOC3Q16853 763 aa16.26■□□□□ 0.19
SIN3B-204ENST00000594372 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
SIN3B-204ENST00000594372 HTATSF1O43719 755 aaKnown RBP16.25■□□□□ 0.19
SIN3B-204ENST00000594372 AOC2O75106 756 aa16.25■□□□□ 0.19
SIN3B-204ENST00000594372 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
SIN3B-204ENST00000594372 ABHD8Q96I13 439 aa16.25■□□□□ 0.19
SIN3B-204ENST00000594372 CAPNS2Q96L46 248 aa16.25■□□□□ 0.19
SIN3B-204ENST00000594372 ERVV-1B6SEH8 477 aa16.24■□□□□ 0.19
SIN3B-204ENST00000594372 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
SIN3B-204ENST00000594372 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
SIN3B-204ENST00000594372 CST9Q5W186 159 aa16.24■□□□□ 0.19
SIN3B-204ENST00000594372 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
SIN3B-204ENST00000594372 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
SIN3B-204ENST00000594372 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
SIN3B-204ENST00000594372 DDX60Q8IY21 1712 aaKnown RBP16.24■□□□□ 0.19
SIN3B-204ENST00000594372 COL4A1P02462 1669 aa16.24■□□□□ 0.19
SIN3B-204ENST00000594372 SHTN1A0MZ66 631 aa16.23■□□□□ 0.19
SIN3B-204ENST00000594372 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
SIN3B-204ENST00000594372 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
SIN3B-204ENST00000594372 NIM1KQ8IY84 436 aa16.23■□□□□ 0.19
SIN3B-204ENST00000594372 ABCC4O15439 1325 aa16.22■□□□□ 0.19
SIN3B-204ENST00000594372 RGL2O15211 777 aa16.22■□□□□ 0.19
SIN3B-204ENST00000594372 DLK2Q6UY11 383 aa16.22■□□□□ 0.19
SIN3B-204ENST00000594372 PLEKHF1Q96S99 279 aa16.22■□□□□ 0.19
SIN3B-204ENST00000594372 GMPSP49915 693 aaPredicted RBP16.21■□□□□ 0.19
SIN3B-204ENST00000594372 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
SIN3B-204ENST00000594372 CRAMP1Q96RY5 1269 aa16.21■□□□□ 0.19
SIN3B-204ENST00000594372 GLIS2Q9BZE0 524 aaPredicted RBP16.21■□□□□ 0.19
SIN3B-204ENST00000594372 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
SIN3B-204ENST00000594372 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
SIN3B-204ENST00000594372 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
SIN3B-204ENST00000594372 CC2D2BQ6DHV5 1058 aa16.2■□□□□ 0.18
SIN3B-204ENST00000594372 GIGYF2Q6Y7W6 1299 aaKnown RBP16.2■□□□□ 0.18
SIN3B-204ENST00000594372 GPR101Q96P66 508 aaPredicted RBP16.2■□□□□ 0.18
SIN3B-204ENST00000594372 ZNF408Q9H9D4 720 aa16.2■□□□□ 0.18
SIN3B-204ENST00000594372 DUOX1Q9NRD9 1551 aa16.2■□□□□ 0.18
SIN3B-204ENST00000594372 CCDC85CA6NKD9 419 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 RAD17O75943 681 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 CXCL9Q07325 125 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 PDIA6Q15084 440 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 LRP10Q7Z4F1 713 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 TRPM4Q8TD43 1214 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
SIN3B-204ENST00000594372 GPRC5DQ9NZD1 345 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
SIN3B-204ENST00000594372 SCN9AQ15858 1988 aa16.18■□□□□ 0.18
SIN3B-204ENST00000594372 CELF2O95319 508 aaKnown RBP16.18■□□□□ 0.18
SIN3B-204ENST00000594372 AIMP1Q12904 312 aaKnown RBP16.18■□□□□ 0.18
SIN3B-204ENST00000594372 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
SIN3B-204ENST00000594372 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
SIN3B-204ENST00000594372 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
SIN3B-204ENST00000594372 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
SIN3B-204ENST00000594372 TLL2Q9Y6L7 1015 aa16.18■□□□□ 0.18
SIN3B-204ENST00000594372 LRRC37AA6NMS7 1700 aa16.18■□□□□ 0.18
SIN3B-204ENST00000594372 NEFMP07197 916 aa16.17■□□□□ 0.18
SIN3B-204ENST00000594372 HIRAP54198 1017 aaPredicted RBP16.17■□□□□ 0.18
SIN3B-204ENST00000594372 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
SIN3B-204ENST00000594372 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
SIN3B-204ENST00000594372 ZIC5Q96T25 663 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms