RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 RPAP2Q8IXW5 612 aaPredicted RBP21.09■□□□□ 0.97
SYNM-204ENST00000594047 DZIP3Q86Y13 1208 aaKnown RBP21.09■□□□□ 0.97
SYNM-204ENST00000594047 MSL1Q68DK7 614 aa21.08■□□□□ 0.97
SYNM-204ENST00000594047 CNNM3Q8NE01 707 aa21.08■□□□□ 0.97
SYNM-204ENST00000594047 PLB1Q6P1J6 1458 aa21.08■□□□□ 0.97
SYNM-204ENST00000594047 ARL1P40616 181 aaPredicted RBP21.08■□□□□ 0.97
SYNM-204ENST00000594047 SYNCQ9H7C4 482 aa21.08■□□□□ 0.97
SYNM-204ENST00000594047 LDHCP07864 332 aa21.08■□□□□ 0.97
SYNM-204ENST00000594047 SNRPA1P09661 255 aaKnown RBP21.08■□□□□ 0.97
SYNM-204ENST00000594047 MTIF2P46199 727 aaKnown RBP21.08■□□□□ 0.97
SYNM-204ENST00000594047 USP16Q9Y5T5 823 aa21.08■□□□□ 0.97
SYNM-204ENST00000594047 UIMC1Q96RL1 719 aa21.08■□□□□ 0.96
SYNM-204ENST00000594047 RNF41Q9H4P4 317 aaPredicted RBP21.08■□□□□ 0.96
SYNM-204ENST00000594047 NOS1P29475 1434 aa21.08■□□□□ 0.96
SYNM-204ENST00000594047 AAMPQ13685 434 aa21.08■□□□□ 0.96
SYNM-204ENST00000594047 CALML4Q96GE6 196 aa21.08■□□□□ 0.96
SYNM-204ENST00000594047 RAB34Q9BZG1 259 aa21.08■□□□□ 0.96
SYNM-204ENST00000594047 BTG4Q9NY30 223 aa21.08■□□□□ 0.96
SYNM-204ENST00000594047 CCDC196A0A1B0GTZ2 297 aa21.07■□□□□ 0.96
SYNM-204ENST00000594047 COPS6Q7L5N1 327 aa21.07■□□□□ 0.96
SYNM-204ENST00000594047 HMGB2P26583 209 aaKnown RBP21.07■□□□□ 0.96
SYNM-204ENST00000594047 LMAN1P49257 510 aa21.07■□□□□ 0.96
SYNM-204ENST00000594047 ZNF526Q8TF50 670 aaPredicted RBP21.07■□□□□ 0.96
SYNM-204ENST00000594047 TCEANC2Q96MN5 208 aa21.07■□□□□ 0.96
SYNM-204ENST00000594047 TMCO5BA8MYB1 307 aa21.07■□□□□ 0.96
SYNM-204ENST00000594047 PROCA1Q8NCQ7 364 aaPredicted RBP21.07■□□□□ 0.96
SYNM-204ENST00000594047 MPHOSPH6Q99547 160 aaKnown RBP21.07■□□□□ 0.96
SYNM-204ENST00000594047 ANKRD13DQ6ZTN6 518 aa21.06■□□□□ 0.96
SYNM-204ENST00000594047 DYDC1Q8WWB3 177 aa21.06■□□□□ 0.96
SYNM-204ENST00000594047 BRPF3Q9ULD4 1205 aa21.06■□□□□ 0.96
SYNM-204ENST00000594047 FANCIQ9NVI1 1328 aa21.06■□□□□ 0.96
SYNM-204ENST00000594047 CETN2P41208 172 aa21.06■□□□□ 0.96
SYNM-204ENST00000594047 METAP2P50579 478 aaKnown RBP eCLIP21.06■□□□□ 0.96
SYNM-204ENST00000594047 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
SYNM-204ENST00000594047 LEKR1Q6ZMV7 388 aa21.05■□□□□ 0.96
SYNM-204ENST00000594047 CHST3Q7LGC8 479 aa21.05■□□□□ 0.96
SYNM-204ENST00000594047 PHACTR2O75167 634 aa21.05■□□□□ 0.96
SYNM-204ENST00000594047 EIF6P56537 245 aaKnown RBP21.05■□□□□ 0.96
SYNM-204ENST00000594047 FNBP4Q8N3X1 1017 aaPredicted RBP21.05■□□□□ 0.96
SYNM-204ENST00000594047 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
SYNM-204ENST00000594047 ZC3H12CQ9C0D7 883 aaKnown RBP21.05■□□□□ 0.96
SYNM-204ENST00000594047 CSPG5O95196 566 aa21.05■□□□□ 0.96
SYNM-204ENST00000594047 RAB3GAP1Q15042 981 aa21.05■□□□□ 0.96
SYNM-204ENST00000594047 FAM98CQ17RN3 349 aaKnown RBP21.05■□□□□ 0.96
SYNM-204ENST00000594047 SMTNL1A8MU46 457 aa21.04■□□□□ 0.96
SYNM-204ENST00000594047 TCHPQ9BT92 498 aa21.04■□□□□ 0.96
SYNM-204ENST00000594047 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
SYNM-204ENST00000594047 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
SYNM-204ENST00000594047 UTP14AQ9BVJ6 771 aaKnown RBP21.04■□□□□ 0.96
SYNM-204ENST00000594047 IFIT1BQ5T764 474 aaKnown RBP21.04■□□□□ 0.96
SYNM-204ENST00000594047 TXLNBQ8N3L3 684 aa21.04■□□□□ 0.96
SYNM-204ENST00000594047 ZMYND15Q9H091 742 aa21.04■□□□□ 0.96
SYNM-204ENST00000594047 TAF12Q16514 161 aa21.04■□□□□ 0.96
SYNM-204ENST00000594047 MAP3K11Q16584 847 aa21.04■□□□□ 0.96
SYNM-204ENST00000594047 SUPT6HQ7KZ85 1726 aaKnown RBP21.03■□□□□ 0.96
SYNM-204ENST00000594047 AFMP43652 599 aa21.03■□□□□ 0.96
SYNM-204ENST00000594047 NOP2P46087 812 aaKnown RBP21.03■□□□□ 0.96
SYNM-204ENST00000594047 OTUD6BQ8N6M0 293 aa21.03■□□□□ 0.96
SYNM-204ENST00000594047 GOLGA6L10A0A0M3HER8 536 aa21.03■□□□□ 0.96
SYNM-204ENST00000594047 TEX13AQ9BXU3 409 aaPredicted RBP21.03■□□□□ 0.96
SYNM-204ENST00000594047 GSTO1P78417 241 aa21.03■□□□□ 0.96
SYNM-204ENST00000594047 ZNF804AQ7Z570 1209 aa21.03■□□□□ 0.96
SYNM-204ENST00000594047 GINS2Q9Y248 185 aa21.03■□□□□ 0.96
SYNM-204ENST00000594047 NAA16Q6N069 864 aaPredicted RBP21.03■□□□□ 0.96
SYNM-204ENST00000594047 SMARCC2Q8TAQ2 1214 aa21.03■□□□□ 0.96
SYNM-204ENST00000594047 CALRP27797 417 aaKnown RBP21.02■□□□□ 0.96
SYNM-204ENST00000594047 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
SYNM-204ENST00000594047 TTF1Q15361 905 aaPredicted RBP21.02■□□□□ 0.96
SYNM-204ENST00000594047 MBIPQ9NS73 344 aa21.02■□□□□ 0.96
SYNM-204ENST00000594047 TCP11L1Q9NUJ3 509 aa21.02■□□□□ 0.96
SYNM-204ENST00000594047 KIF5BP33176 963 aa21.02■□□□□ 0.96
SYNM-204ENST00000594047 IARSP41252 1262 aaKnown RBP21.02■□□□□ 0.96
SYNM-204ENST00000594047 PA2G4Q9UQ80 394 aaKnown RBP21.02■□□□□ 0.96
SYNM-204ENST00000594047 HOMER2Q9NSB8 354 aa21.02■□□□□ 0.96
SYNM-204ENST00000594047 PLIN2Q99541 437 aa21.02■□□□□ 0.95
SYNM-204ENST00000594047 TRMT1Q9NXH9 659 aaKnown RBP21.02■□□□□ 0.95
SYNM-204ENST00000594047 TMEM110-MUSTN1A8MSY1 372 aa21.01■□□□□ 0.95
SYNM-204ENST00000594047 BEGAINQ9BUH8 593 aa21.01■□□□□ 0.95
SYNM-204ENST00000594047 HARSP12081 509 aaKnown RBP21.01■□□□□ 0.95
SYNM-204ENST00000594047 TBCAO75347 108 aaKnown RBP21.01■□□□□ 0.95
SYNM-204ENST00000594047 CCDC174Q6PII3 467 aa21.01■□□□□ 0.95
SYNM-204ENST00000594047 PABPN1LA6NDY0 278 aaKnown RBP21.01■□□□□ 0.95
SYNM-204ENST00000594047 GPR162Q16538 588 aa21.01■□□□□ 0.95
SYNM-204ENST00000594047 FSIP1Q8NA03 581 aa21.01■□□□□ 0.95
SYNM-204ENST00000594047 CCDC148Q8NFR7 591 aa21.01■□□□□ 0.95
SYNM-204ENST00000594047 NECAB1Q8N987 351 aa21■□□□□ 0.95
SYNM-204ENST00000594047 GJB2P29033 226 aa21■□□□□ 0.95
SYNM-204ENST00000594047 LUZP1Q86V48 1076 aa21■□□□□ 0.95
SYNM-204ENST00000594047 FAM170AA1A519 330 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 RXRAP19793 462 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 STK32BQ9NY57 414 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 RFX1P22670 979 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 WTAPQ15007 396 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 HOOK3Q86VS8 718 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 MRVI1Q9Y6F6 885 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 TNRQ92752 1358 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 ERICH4A6NGS2 130 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 ABCC5O15440 1437 aa20.99■□□□□ 0.95
SYNM-204ENST00000594047 LMBR1LQ6UX01 489 aa20.98■□□□□ 0.95
SYNM-204ENST00000594047 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms