RNA–Protein interactions for RNA: ENST00000594044.1

ARHGEF1-206, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 834 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-206ENST00000594044 POTECB2RU33 542 aa17.6■□□□□ 0.41
ARHGEF1-206ENST00000594044 APLP1P51693 650 aa17.6■□□□□ 0.41
ARHGEF1-206ENST00000594044 FKBP4Q02790 459 aaKnown RBP eCLIP17.6■□□□□ 0.41
ARHGEF1-206ENST00000594044 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
ARHGEF1-206ENST00000594044 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
ARHGEF1-206ENST00000594044 NECTIN2Q92692 538 aa17.6■□□□□ 0.41
ARHGEF1-206ENST00000594044 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
ARHGEF1-206ENST00000594044 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
ARHGEF1-206ENST00000594044 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
ARHGEF1-206ENST00000594044 OLFM4Q6UX06 510 aa17.59■□□□□ 0.41
ARHGEF1-206ENST00000594044 CRAMP1Q96RY5 1269 aa17.59■□□□□ 0.41
ARHGEF1-206ENST00000594044 UTP14AQ9BVJ6 771 aaKnown RBP17.59■□□□□ 0.41
ARHGEF1-206ENST00000594044 IFT57Q9NWB7 429 aa17.59■□□□□ 0.41
ARHGEF1-206ENST00000594044 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.4
ARHGEF1-206ENST00000594044 TCIRG1Q13488 830 aa17.58■□□□□ 0.4
ARHGEF1-206ENST00000594044 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
ARHGEF1-206ENST00000594044 HDGFL1Q5TGJ6 251 aa17.58■□□□□ 0.4
ARHGEF1-206ENST00000594044 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
ARHGEF1-206ENST00000594044 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.4
ARHGEF1-206ENST00000594044 CHPF2Q9P2E5 772 aa17.58■□□□□ 0.4
ARHGEF1-206ENST00000594044 GNAI1P63096 354 aa17.57■□□□□ 0.4
ARHGEF1-206ENST00000594044 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
ARHGEF1-206ENST00000594044 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
ARHGEF1-206ENST00000594044 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
ARHGEF1-206ENST00000594044 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
ARHGEF1-206ENST00000594044 LAMB2P55268 1798 aa17.57■□□□□ 0.4
ARHGEF1-206ENST00000594044 DNAJC5GQ8N7S2 189 aa17.56■□□□□ 0.4
ARHGEF1-206ENST00000594044 RPGRQ92834 1020 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-206ENST00000594044 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-206ENST00000594044 PSMD1Q99460 953 aa17.56■□□□□ 0.4
ARHGEF1-206ENST00000594044 ZNF316A6NFI3 1004 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 ANKRD13DQ6ZTN6 518 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 SYNE4Q8N205 404 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 SMC1BQ8NDV3 1235 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 PLBD2Q8NHP8 589 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 ZNF277Q9NRM2 450 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 HYPKQ9NX55 129 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 SCN4AP35499 1836 aa17.55■□□□□ 0.4
ARHGEF1-206ENST00000594044 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF1-206ENST00000594044 IARSP41252 1262 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-206ENST00000594044 CCDC27Q2M243 656 aa17.53■□□□□ 0.4
ARHGEF1-206ENST00000594044 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-206ENST00000594044 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF1-206ENST00000594044 ISCA1Q9BUE6 129 aa17.53■□□□□ 0.4
ARHGEF1-206ENST00000594044 FZD9O00144 591 aa17.52■□□□□ 0.4
ARHGEF1-206ENST00000594044 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
ARHGEF1-206ENST00000594044 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
ARHGEF1-206ENST00000594044 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
ARHGEF1-206ENST00000594044 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
ARHGEF1-206ENST00000594044 DDX60Q8IY21 1712 aaKnown RBP17.5■□□□□ 0.39
ARHGEF1-206ENST00000594044 PPEF1O14829 653 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF1-206ENST00000594044 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF1-206ENST00000594044 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
ARHGEF1-206ENST00000594044 TAF1P21675 1872 aa17.5■□□□□ 0.39
ARHGEF1-206ENST00000594044 ABCC4O15439 1325 aa17.49■□□□□ 0.39
ARHGEF1-206ENST00000594044 BBOX1O75936 387 aa17.49■□□□□ 0.39
ARHGEF1-206ENST00000594044 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
ARHGEF1-206ENST00000594044 COL4A5P29400 1685 aa17.48■□□□□ 0.39
ARHGEF1-206ENST00000594044 ZNF541Q9H0D2 1346 aa17.48■□□□□ 0.39
ARHGEF1-206ENST00000594044 IQCA1LA6NCM1 817 aa17.48■□□□□ 0.39
ARHGEF1-206ENST00000594044 ELL2O00472 640 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF1-206ENST00000594044 SLC51AQ86UW1 340 aa17.48■□□□□ 0.39
ARHGEF1-206ENST00000594044 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
ARHGEF1-206ENST00000594044 ANP32CO43423 234 aa17.47■□□□□ 0.39
ARHGEF1-206ENST00000594044 SP8Q8IXZ3 490 aa17.47■□□□□ 0.39
ARHGEF1-206ENST00000594044 JDP2Q8WYK2 163 aa17.47■□□□□ 0.39
ARHGEF1-206ENST00000594044 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF1-206ENST00000594044 VPS33BQ9H267 617 aa17.47■□□□□ 0.39
ARHGEF1-206ENST00000594044 PHAXQ9H814 394 aaKnown RBP17.47■□□□□ 0.39
ARHGEF1-206ENST00000594044 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 SF3B3Q15393 1217 aaKnown RBP17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 CHADLQ6NUI6 762 aa17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 GPC2Q8N158 579 aa17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 TSPYL6Q8N831 410 aa17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 TAF1DQ9H5J8 278 aaPredicted RBP17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 MRS2Q9HD23 443 aa17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
ARHGEF1-206ENST00000594044 IL16Q14005 1332 aa17.46■□□□□ 0.38
ARHGEF1-206ENST00000594044 PCNTO95613 3336 aa17.46■□□□□ 0.38
ARHGEF1-206ENST00000594044 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 POTEJP0CG39 1038 aa17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 HTRA3P83110 453 aa17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 GRAPQ13588 217 aa17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 GRAPLQ8TC17 118 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 KLRG1Q96E93 195 aa17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
ARHGEF1-206ENST00000594044 ADAMTSL1Q8N6G6 1762 aa17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 GOLGA2Q08379 1002 aa17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 TMC4Q7Z404 712 aa17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 LARGE2Q8N3Y3 721 aa17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 HACL1Q9UJ83 578 aa17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
ARHGEF1-206ENST00000594044 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms