RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 GIGYF2Q6Y7W6 1299 aaKnown RBP14.09□□□□□ -0.15
USE1-203ENST00000593597 ERBB4Q15303 1308 aa14.09□□□□□ -0.15
USE1-203ENST00000593597 RNF123Q5XPI4 1314 aa14.09□□□□□ -0.15
USE1-203ENST00000593597 DUOX1Q9NRD9 1551 aa14.09□□□□□ -0.15
USE1-203ENST00000593597 ITGBL1O95965 494 aaPredicted RBP14.08□□□□□ -0.16
USE1-203ENST00000593597 ALDH1B1P30837 517 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 RIPK4P57078 832 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 KRT24Q2M2I5 525 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 KIF6Q6ZMV9 814 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 LDHDQ86WU2 507 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 RTKN2Q8IZC4 609 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 PSMD1Q99460 953 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 NYXQ9GZU5 481 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.16
USE1-203ENST00000593597 TSPYL4Q9UJ04 414 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 TRPM7Q96QT4 1865 aa14.08□□□□□ -0.16
USE1-203ENST00000593597 NEFMP07197 916 aa14.07□□□□□ -0.16
USE1-203ENST00000593597 GTF2E1P29083 439 aaPredicted RBP14.07□□□□□ -0.16
USE1-203ENST00000593597 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
USE1-203ENST00000593597 THSD7BQ9C0I4 1608 aa14.07□□□□□ -0.16
USE1-203ENST00000593597 CNTNAP1P78357 1384 aa14.07□□□□□ -0.16
USE1-203ENST00000593597 IQCA1LA6NCM1 817 aa14.06□□□□□ -0.16
USE1-203ENST00000593597 EIF2S2P20042 333 aaKnown RBP14.06□□□□□ -0.16
USE1-203ENST00000593597 CCDC146Q8IYE0 955 aa14.06□□□□□ -0.16
USE1-203ENST00000593597 PPEF1O14829 653 aaPredicted RBP14.05□□□□□ -0.16
USE1-203ENST00000593597 EPHX2P34913 555 aa14.05□□□□□ -0.16
USE1-203ENST00000593597 EAPPQ56P03 285 aaPredicted RBP14.05□□□□□ -0.16
USE1-203ENST00000593597 NECTIN2Q92692 538 aa14.05□□□□□ -0.16
USE1-203ENST00000593597 CRAMP1Q96RY5 1269 aa14.05□□□□□ -0.16
USE1-203ENST00000593597 HACL1Q9UJ83 578 aa14.05□□□□□ -0.16
USE1-203ENST00000593597 TRIM35Q9UPQ4 493 aa14.05□□□□□ -0.16
USE1-203ENST00000593597 ABCC4O15439 1325 aa14.05□□□□□ -0.16
USE1-203ENST00000593597 TCERG1O14776 1098 aaKnown RBP14.04□□□□□ -0.16
USE1-203ENST00000593597 SCNN1DP51172 638 aa14.04□□□□□ -0.16
USE1-203ENST00000593597 FMR1Q06787 632 aaKnown RBP eCLIP14.04□□□□□ -0.16
USE1-203ENST00000593597 RALBP1Q15311 655 aa14.04□□□□□ -0.16
USE1-203ENST00000593597 GPC2Q8N158 579 aa14.04□□□□□ -0.16
USE1-203ENST00000593597 RPGRQ92834 1020 aaKnown RBP14.04□□□□□ -0.16
USE1-203ENST00000593597 SLC10A5Q5PT55 438 aa14.03□□□□□ -0.16
USE1-203ENST00000593597 MAP1SQ66K74 1059 aaPredicted RBP14.03□□□□□ -0.16
USE1-203ENST00000593597 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
USE1-203ENST00000593597 PNNQ9H307 717 aaKnown RBP14.03□□□□□ -0.16
USE1-203ENST00000593597 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
USE1-203ENST00000593597 MYBBP1AQ9BQG0 1328 aaKnown RBP14.03□□□□□ -0.16
USE1-203ENST00000593597 CHL1O00533 1208 aa14.02□□□□□ -0.17
USE1-203ENST00000593597 DDX10Q13206 875 aaKnown RBP14.02□□□□□ -0.17
USE1-203ENST00000593597 PARP10Q53GL7 1025 aa14.02□□□□□ -0.17
USE1-203ENST00000593597 CC2D2BQ6DHV5 1058 aa14.02□□□□□ -0.17
USE1-203ENST00000593597 COPS6Q7L5N1 327 aa14.02□□□□□ -0.17
USE1-203ENST00000593597 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
USE1-203ENST00000593597 ZNF428Q96B54 188 aa14.02□□□□□ -0.17
USE1-203ENST00000593597 RBM17Q96I25 401 aaKnown RBP14.02□□□□□ -0.17
USE1-203ENST00000593597 FOXN1O15353 648 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
USE1-203ENST00000593597 EPS15P42566 896 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 VEGFBP49765 207 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 AIMP1Q12904 312 aaKnown RBP14.01□□□□□ -0.17
USE1-203ENST00000593597 NEUROD2Q15784 382 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 AOC3Q16853 763 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 PPP1R42Q7Z4L9 355 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 TNS4Q8IZW8 715 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
USE1-203ENST00000593597 GJA3Q9Y6H8 435 aa14.01□□□□□ -0.17
USE1-203ENST00000593597 TMEM88BA6NKF7 163 aa14□□□□□ -0.17
USE1-203ENST00000593597 CNTROBQ8N137 903 aa14□□□□□ -0.17
USE1-203ENST00000593597 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
USE1-203ENST00000593597 DDX21Q9NR30 783 aaKnown RBP eCLIP14□□□□□ -0.17
USE1-203ENST00000593597 CHPF2Q9P2E5 772 aa14□□□□□ -0.17
USE1-203ENST00000593597 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
USE1-203ENST00000593597 CAPN15O75808 1086 aa13.99□□□□□ -0.17
USE1-203ENST00000593597 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
USE1-203ENST00000593597 LMOD3Q0VAK6 560 aa13.99□□□□□ -0.17
USE1-203ENST00000593597 JDP2Q8WYK2 163 aa13.99□□□□□ -0.17
USE1-203ENST00000593597 NLRP3Q96P20 1036 aa13.99□□□□□ -0.17
USE1-203ENST00000593597 RTFDC1Q9BY42 306 aaPredicted RBP13.99□□□□□ -0.17
USE1-203ENST00000593597 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
USE1-203ENST00000593597 SCN9AQ15858 1988 aa13.99□□□□□ -0.17
USE1-203ENST00000593597 PPIP5K2O43314 1243 aa13.98□□□□□ -0.17
USE1-203ENST00000593597 TCIRG1Q13488 830 aa13.98□□□□□ -0.17
USE1-203ENST00000593597 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
USE1-203ENST00000593597 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
USE1-203ENST00000593597 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
USE1-203ENST00000593597 RASSF10A6NK89 507 aa13.97□□□□□ -0.17
USE1-203ENST00000593597 NIM1KQ8IY84 436 aa13.97□□□□□ -0.17
USE1-203ENST00000593597 ISCA1Q9BUE6 129 aa13.97□□□□□ -0.17
USE1-203ENST00000593597 ZNF646O15015 1829 aaPredicted RBP13.97□□□□□ -0.17
USE1-203ENST00000593597 POLR2AP24928 1970 aaKnown RBP13.96□□□□□ -0.17
USE1-203ENST00000593597 TRAF5O00463 557 aa13.96□□□□□ -0.17
USE1-203ENST00000593597 CXCL9Q07325 125 aa13.96□□□□□ -0.17
USE1-203ENST00000593597 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
USE1-203ENST00000593597 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.17
USE1-203ENST00000593597 PSME4Q14997 1843 aa13.96□□□□□ -0.17
USE1-203ENST00000593597 SPEF2Q9C093 1822 aa13.96□□□□□ -0.17
USE1-203ENST00000593597 SH3TC1Q8TE82 1336 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 YDJCA8MPS7 323 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 ZNF853P0CG23 659 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 GRAPQ13588 217 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 HSP90AB3PQ58FF7 597 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms