RNA–Protein interactions for RNA: ENST00000593336.3

LINC01828-204, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-204ENST00000593336 RNF217Q8TC41 542 aa7.58□□□□□ -1.2
LINC01828-204ENST00000593336 INSM2Q96T92 566 aaPredicted RBP7.58□□□□□ -1.2
LINC01828-204ENST00000593336 OCSTAMPQ9BR26 566 aa7.58□□□□□ -1.2
LINC01828-204ENST00000593336 POGKQ9P215 609 aa7.58□□□□□ -1.2
LINC01828-204ENST00000593336 DIP2AQ14689 1571 aa7.58□□□□□ -1.2
LINC01828-204ENST00000593336 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
LINC01828-204ENST00000593336 FOXK2Q01167 660 aa7.57□□□□□ -1.2
LINC01828-204ENST00000593336 SH3D19Q5HYK7 790 aa7.57□□□□□ -1.2
LINC01828-204ENST00000593336 VWA5B2Q8N398 1253 aa7.57□□□□□ -1.2
LINC01828-204ENST00000593336 LRRN4Q8WUT4 740 aa7.57□□□□□ -1.2
LINC01828-204ENST00000593336 SLC24A1O60721 1099 aa7.56□□□□□ -1.2
LINC01828-204ENST00000593336 ADH1AP07327 375 aa7.56□□□□□ -1.2
LINC01828-204ENST00000593336 RELBQ01201 579 aa7.56□□□□□ -1.2
LINC01828-204ENST00000593336 ADAM32Q8TC27 787 aa7.56□□□□□ -1.2
LINC01828-204ENST00000593336 SCARF2Q96GP6 870 aaPredicted RBP7.56□□□□□ -1.2
LINC01828-204ENST00000593336 AGBL1Q96MI9 1066 aa7.56□□□□□ -1.2
LINC01828-204ENST00000593336 PUS7Q96PZ0 661 aaKnown RBP7.56□□□□□ -1.2
LINC01828-204ENST00000593336 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.56□□□□□ -1.2
LINC01828-204ENST00000593336 POLMQ9NP87 494 aaPredicted RBP7.56□□□□□ -1.2
LINC01828-204ENST00000593336 PTCH1Q13635 1447 aa7.55□□□□□ -1.2
LINC01828-204ENST00000593336 CDC14CA4D256 554 aa7.55□□□□□ -1.2
LINC01828-204ENST00000593336 SRSF11Q05519 484 aaKnown RBP7.55□□□□□ -1.2
LINC01828-204ENST00000593336 NR6A1Q15406 480 aa7.55□□□□□ -1.2
LINC01828-204ENST00000593336 DIEXFQ68CQ4 756 aaKnown RBP7.55□□□□□ -1.2
LINC01828-204ENST00000593336 SEPT12Q8IYM1 358 aa7.55□□□□□ -1.2
LINC01828-204ENST00000593336 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
LINC01828-204ENST00000593336 CDK19Q9BWU1 502 aa7.55□□□□□ -1.2
LINC01828-204ENST00000593336 CPS1P31327 1500 aa7.55□□□□□ -1.2
LINC01828-204ENST00000593336 EVC2Q86UK5 1308 aa7.54□□□□□ -1.2
LINC01828-204ENST00000593336 STRCQ7RTU9 1775 aa7.54□□□□□ -1.2
LINC01828-204ENST00000593336 TULP4Q9NRJ4 1543 aa7.54□□□□□ -1.2
LINC01828-204ENST00000593336 WASLO00401 505 aaPredicted RBP7.54□□□□□ -1.2
LINC01828-204ENST00000593336 LILRA1O75019 489 aa7.54□□□□□ -1.2
LINC01828-204ENST00000593336 ZNF784Q8NCA9 323 aaPredicted RBP7.54□□□□□ -1.2
LINC01828-204ENST00000593336 WHAMMQ8TF30 809 aa7.54□□□□□ -1.2
LINC01828-204ENST00000593336 XRN1Q8IZH2 1706 aaKnown RBP7.54□□□□□ -1.2
LINC01828-204ENST00000593336 ARHGEF28Q8N1W1 1705 aaKnown RBP7.54□□□□□ -1.2
LINC01828-204ENST00000593336 ESPNB1AK53 854 aa7.53□□□□□ -1.2
LINC01828-204ENST00000593336 PTGIRP43119 386 aa7.53□□□□□ -1.2
LINC01828-204ENST00000593336 MARSP56192 900 aaKnown RBP7.53□□□□□ -1.2
LINC01828-204ENST00000593336 CDCA8Q53HL2 280 aa7.53□□□□□ -1.2
LINC01828-204ENST00000593336 PROSER2Q86WR7 435 aaPredicted RBP7.53□□□□□ -1.2
LINC01828-204ENST00000593336 CCDC125Q86Z20 511 aa7.53□□□□□ -1.2
LINC01828-204ENST00000593336 POLR3GLQ9BT43 218 aa7.53□□□□□ -1.2
LINC01828-204ENST00000593336 SLC12A5Q9H2X9 1139 aa7.53□□□□□ -1.2
LINC01828-204ENST00000593336 ZNF335Q9H4Z2 1342 aaPredicted RBP7.52□□□□□ -1.2
LINC01828-204ENST00000593336 PRR36Q9H6K5 1346 aa7.52□□□□□ -1.2
LINC01828-204ENST00000593336 ADAMTS2O95450 1211 aa7.52□□□□□ -1.21
LINC01828-204ENST00000593336 IRS1P35568 1242 aa7.52□□□□□ -1.21
LINC01828-204ENST00000593336 KDF1Q8NAX2 398 aaPredicted RBP7.52□□□□□ -1.21
LINC01828-204ENST00000593336 DDRGK1Q96HY6 314 aa7.52□□□□□ -1.21
LINC01828-204ENST00000593336 PANK3Q9H999 370 aa7.52□□□□□ -1.21
LINC01828-204ENST00000593336 POLR1AO95602 1720 aaPredicted RBP7.52□□□□□ -1.21
LINC01828-204ENST00000593336 KNDC1Q76NI1 1749 aa7.52□□□□□ -1.21
LINC01828-204ENST00000593336 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.52□□□□□ -1.21
LINC01828-204ENST00000593336 NWD1Q149M9 1564 aa7.51□□□□□ -1.21
LINC01828-204ENST00000593336 ERVH48-1M5A8F1 160 aa7.51□□□□□ -1.21
LINC01828-204ENST00000593336 RNF144AP50876 292 aaPredicted RBP7.51□□□□□ -1.21
LINC01828-204ENST00000593336 SRPK2P78362 688 aaKnown RBP7.51□□□□□ -1.21
LINC01828-204ENST00000593336 MAP3K10Q02779 954 aa7.51□□□□□ -1.21
LINC01828-204ENST00000593336 FOXD4L5Q5VV16 416 aaPredicted RBP7.51□□□□□ -1.21
LINC01828-204ENST00000593336 LYSMD3Q7Z3D4 306 aa7.51□□□□□ -1.21
LINC01828-204ENST00000593336 DZIP3Q86Y13 1208 aaKnown RBP7.51□□□□□ -1.21
LINC01828-204ENST00000593336 NUDT16Q96DE0 195 aaKnown RBP7.51□□□□□ -1.21
LINC01828-204ENST00000593336 ZNF395Q9H8N7 513 aaPredicted RBP7.51□□□□□ -1.21
LINC01828-204ENST00000593336 ENAMQ9NRM1 1142 aa7.51□□□□□ -1.21
LINC01828-204ENST00000593336 QRICH2Q9H0J4 1663 aa7.51□□□□□ -1.21
LINC01828-204ENST00000593336 CHD2O14647 1828 aaKnown RBP7.5□□□□□ -1.21
LINC01828-204ENST00000593336 TMEM94Q12767 1356 aa7.5□□□□□ -1.21
LINC01828-204ENST00000593336 TMPRSS4Q9NRS4 437 aa7.5□□□□□ -1.21
LINC01828-204ENST00000593336 CABP1Q9NZU7 370 aa7.5□□□□□ -1.21
LINC01828-204ENST00000593336 NKTRP30414 1462 aaKnown RBP7.49□□□□□ -1.21
LINC01828-204ENST00000593336 GPC1P35052 558 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 ADD1P35611 737 aaKnown RBP7.49□□□□□ -1.21
LINC01828-204ENST00000593336 GAS6Q14393 721 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 GPAT2Q6NUI2 795 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 TRIM22Q8IYM9 498 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 PROCA1Q8NCQ7 364 aaPredicted RBP7.49□□□□□ -1.21
LINC01828-204ENST00000593336 C19orf44Q9H6X5 657 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 LRRC4BQ9NT99 713 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 ADGRL3Q9HAR2 1447 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 NCOA3Q9Y6Q9 1424 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 ADGRB2O60241 1585 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 CD163L1Q9NR16 1453 aa7.49□□□□□ -1.21
LINC01828-204ENST00000593336 ATAD2Q6PL18 1390 aa7.48□□□□□ -1.21
LINC01828-204ENST00000593336 LRRC7Q96NW7 1537 aa7.48□□□□□ -1.21
LINC01828-204ENST00000593336 AP1G2O75843 785 aa7.48□□□□□ -1.21
LINC01828-204ENST00000593336 LYPD4Q6UWN0 246 aa7.48□□□□□ -1.21
LINC01828-204ENST00000593336 TMC1Q8TDI8 760 aa7.48□□□□□ -1.21
LINC01828-204ENST00000593336 STRCP1A6NGW2 1772 aa7.48□□□□□ -1.21
LINC01828-204ENST00000593336 CPSF1Q10570 1443 aaKnown RBP7.47□□□□□ -1.21
LINC01828-204ENST00000593336 CELA2BP08218 269 aaPredicted RBP7.47□□□□□ -1.21
LINC01828-204ENST00000593336 FOXR1Q6PIV2 292 aa7.47□□□□□ -1.21
LINC01828-204ENST00000593336 KDM4CQ9H3R0 1056 aa7.47□□□□□ -1.21
LINC01828-204ENST00000593336 MBIPQ9NS73 344 aa7.47□□□□□ -1.21
LINC01828-204ENST00000593336 ATP7BP35670 1465 aa7.47□□□□□ -1.21
LINC01828-204ENST00000593336 ANKRD36BQ8N2N9 1353 aa7.46□□□□□ -1.21
LINC01828-204ENST00000593336 ANKARQ7Z5J8 1434 aa7.46□□□□□ -1.21
LINC01828-204ENST00000593336 USP17L8P0C7I0 530 aa7.46□□□□□ -1.22
LINC01828-204ENST00000593336 CUEDC1Q9NWM3 386 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms