RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 CCDC93Q567U6 631 aa22.99■■□□□ 1.27
CIRBP-244ENST00000593283 HSP90AB3PQ58FF7 597 aa22.98■■□□□ 1.27
CIRBP-244ENST00000593283 OLFM4Q6UX06 510 aa22.98■■□□□ 1.27
CIRBP-244ENST00000593283 UTP14AQ9BVJ6 771 aaKnown RBP22.98■■□□□ 1.27
CIRBP-244ENST00000593283 DDX60Q8IY21 1712 aaKnown RBP22.97■■□□□ 1.27
CIRBP-244ENST00000593283 C3orf67Q6ZVT6 689 aa22.97■■□□□ 1.27
CIRBP-244ENST00000593283 RPGRQ92834 1020 aaKnown RBP22.97■■□□□ 1.27
CIRBP-244ENST00000593283 ELL2O00472 640 aaPredicted RBP22.96■■□□□ 1.27
CIRBP-244ENST00000593283 TCIRG1Q13488 830 aa22.96■■□□□ 1.27
CIRBP-244ENST00000593283 CCDC27Q2M243 656 aa22.96■■□□□ 1.27
CIRBP-244ENST00000593283 NLRP10Q86W26 655 aa22.96■■□□□ 1.27
CIRBP-244ENST00000593283 PLBD2Q8NHP8 589 aa22.96■■□□□ 1.27
CIRBP-244ENST00000593283 HYPKQ9NX55 129 aa22.96■■□□□ 1.27
CIRBP-244ENST00000593283 ALDH1B1P30837 517 aa22.95■■□□□ 1.26
CIRBP-244ENST00000593283 RNF123Q5XPI4 1314 aa22.95■■□□□ 1.26
CIRBP-244ENST00000593283 C8orf58Q8NAV2 365 aa22.95■■□□□ 1.26
CIRBP-244ENST00000593283 SNED1Q8TER0 1413 aa22.95■■□□□ 1.26
CIRBP-244ENST00000593283 TSR2Q969E8 191 aaKnown RBP22.95■■□□□ 1.26
CIRBP-244ENST00000593283 WDR90Q96KV7 1748 aa22.95■■□□□ 1.26
CIRBP-244ENST00000593283 HOXA10P31260 410 aaPredicted RBP22.94■■□□□ 1.26
CIRBP-244ENST00000593283 WWC1Q8IX03 1113 aa22.94■■□□□ 1.26
CIRBP-244ENST00000593283 GLTPD2A6NH11 291 aa22.93■■□□□ 1.26
CIRBP-244ENST00000593283 TOMM70O94826 608 aa22.93■■□□□ 1.26
CIRBP-244ENST00000593283 ANKRD13DQ6ZTN6 518 aa22.93■■□□□ 1.26
CIRBP-244ENST00000593283 TAF1P21675 1872 aa22.93■■□□□ 1.26
CIRBP-244ENST00000593283 CEP350Q5VT06 3117 aa22.93■■□□□ 1.26
CIRBP-244ENST00000593283 FKBP4Q02790 459 aaKnown RBP eCLIP22.92■■□□□ 1.26
CIRBP-244ENST00000593283 TSPYL6Q8N831 410 aa22.92■■□□□ 1.26
CIRBP-244ENST00000593283 ZNF428Q96B54 188 aa22.92■■□□□ 1.26
CIRBP-244ENST00000593283 RRAGCQ9HB90 399 aa22.92■■□□□ 1.26
CIRBP-244ENST00000593283 SLC10A5Q5PT55 438 aa22.91■■□□□ 1.26
CIRBP-244ENST00000593283 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
CIRBP-244ENST00000593283 C16orf71Q8IYS4 520 aaPredicted RBP22.91■■□□□ 1.26
CIRBP-244ENST00000593283 RTKN2Q8IZC4 609 aa22.91■■□□□ 1.26
CIRBP-244ENST00000593283 SYNE4Q8N205 404 aa22.91■■□□□ 1.26
CIRBP-244ENST00000593283 RBM17Q96I25 401 aaKnown RBP22.91■■□□□ 1.26
CIRBP-244ENST00000593283 NLRP3Q96P20 1036 aa22.91■■□□□ 1.26
CIRBP-244ENST00000593283 TRMT112Q9UI30 125 aaKnown RBP22.91■■□□□ 1.26
CIRBP-244ENST00000593283 SH3TC1Q8TE82 1336 aa22.9■■□□□ 1.26
CIRBP-244ENST00000593283 HCLS1P14317 486 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-244ENST00000593283 HSPA6P17066 643 aa22.9■■□□□ 1.26
CIRBP-244ENST00000593283 CRAMP1Q96RY5 1269 aa22.9■■□□□ 1.26
CIRBP-244ENST00000593283 PHAXQ9H814 394 aaKnown RBP22.9■■□□□ 1.26
CIRBP-244ENST00000593283 ZNF277Q9NRM2 450 aaPredicted RBP22.9■■□□□ 1.26
CIRBP-244ENST00000593283 IL16Q14005 1332 aa22.89■■□□□ 1.26
CIRBP-244ENST00000593283 ATP5J2-PTCD1G3V325 749 aa22.89■■□□□ 1.25
CIRBP-244ENST00000593283 PPEF1O14829 653 aaPredicted RBP22.89■■□□□ 1.25
CIRBP-244ENST00000593283 GOLGA2Q08379 1002 aa22.89■■□□□ 1.25
CIRBP-244ENST00000593283 RBM46Q8TBY0 533 aaKnown RBP22.89■■□□□ 1.25
CIRBP-244ENST00000593283 ISCA1Q9BUE6 129 aa22.89■■□□□ 1.25
CIRBP-244ENST00000593283 NCBP3Q53F19 620 aaKnown RBP22.88■■□□□ 1.25
CIRBP-244ENST00000593283 ABCC4O15439 1325 aa22.87■■□□□ 1.25
CIRBP-244ENST00000593283 CCDC30Q5VVM6 783 aa22.87■■□□□ 1.25
CIRBP-244ENST00000593283 SALL2Q9Y467 1007 aaPredicted RBP22.87■■□□□ 1.25
CIRBP-244ENST00000593283 CACNA1FO60840 1977 aa22.87■■□□□ 1.25
CIRBP-244ENST00000593283 DPY19L2Q6NUT2 758 aa22.86■■□□□ 1.25
CIRBP-244ENST00000593283 RIC3Q7Z5B4 369 aa22.86■■□□□ 1.25
CIRBP-244ENST00000593283 COL4A5P29400 1685 aa22.86■■□□□ 1.25
CIRBP-244ENST00000593283 LRRC37AA6NMS7 1700 aa22.85■■□□□ 1.25
CIRBP-244ENST00000593283 FANCIQ9NVI1 1328 aa22.85■■□□□ 1.25
CIRBP-244ENST00000593283 TCERG1O14776 1098 aaKnown RBP22.85■■□□□ 1.25
CIRBP-244ENST00000593283 VEGFAP15692 232 aaPredicted RBP22.85■■□□□ 1.25
CIRBP-244ENST00000593283 CC2D2BQ6DHV5 1058 aa22.85■■□□□ 1.25
CIRBP-244ENST00000593283 FAM9BQ8IZU0 186 aa22.85■■□□□ 1.25
CIRBP-244ENST00000593283 PSMD1Q99460 953 aa22.85■■□□□ 1.25
CIRBP-244ENST00000593283 IARSP41252 1262 aaKnown RBP22.84■■□□□ 1.25
CIRBP-244ENST00000593283 FAM89AQ96GI7 184 aa22.84■■□□□ 1.25
CIRBP-244ENST00000593283 CHMP4AQ9BY43 222 aa22.84■■□□□ 1.25
CIRBP-244ENST00000593283 SCN4AP35499 1836 aa22.84■■□□□ 1.25
CIRBP-244ENST00000593283 ZNF541Q9H0D2 1346 aa22.83■■□□□ 1.25
CIRBP-244ENST00000593283 POTECB2RU33 542 aa22.83■■□□□ 1.25
CIRBP-244ENST00000593283 TWISTNBQ3B726 338 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-244ENST00000593283 COL4A1P02462 1669 aa22.83■■□□□ 1.24
CIRBP-244ENST00000593283 DDNO94850 711 aaPredicted RBP22.82■■□□□ 1.24
CIRBP-244ENST00000593283 TRIM28Q13263 835 aaKnown RBP22.82■■□□□ 1.24
CIRBP-244ENST00000593283 MYD88Q99836 296 aa22.82■■□□□ 1.24
CIRBP-244ENST00000593283 FSTL1Q12841 308 aa22.81■■□□□ 1.24
CIRBP-244ENST00000593283 RTL5Q5HYW3 569 aaPredicted RBP22.81■■□□□ 1.24
CIRBP-244ENST00000593283 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
CIRBP-244ENST00000593283 STK31Q9BXU1 1019 aa22.81■■□□□ 1.24
CIRBP-244ENST00000593283 ATP6V0A2Q9Y487 856 aa22.81■■□□□ 1.24
CIRBP-244ENST00000593283 DDX58O95786 925 aaKnown RBP22.8■■□□□ 1.24
CIRBP-244ENST00000593283 GRIPAP1Q4V328 841 aa22.8■■□□□ 1.24
CIRBP-244ENST00000593283 DDX46Q7L014 1031 aaKnown RBP22.8■■□□□ 1.24
CIRBP-244ENST00000593283 MYH3P11055 1940 aa22.8■■□□□ 1.24
CIRBP-244ENST00000593283 GRAPQ13588 217 aa22.79■■□□□ 1.24
CIRBP-244ENST00000593283 SMC1BQ8NDV3 1235 aa22.79■■□□□ 1.24
CIRBP-244ENST00000593283 GRAPLQ8TC17 118 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-244ENST00000593283 IRS4O14654 1257 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-244ENST00000593283 APLP1P51693 650 aa22.78■■□□□ 1.24
CIRBP-244ENST00000593283 METTL22Q9BUU2 404 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-244ENST00000593283 DUOX1Q9NRD9 1551 aa22.78■■□□□ 1.24
CIRBP-244ENST00000593283 MAP3K2Q9Y2U5 619 aa22.78■■□□□ 1.24
CIRBP-244ENST00000593283 FZD9O00144 591 aa22.77■■□□□ 1.24
CIRBP-244ENST00000593283 BBOX1O75936 387 aa22.77■■□□□ 1.24
CIRBP-244ENST00000593283 ZBTB38Q8NAP3 1195 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-244ENST00000593283 L3MBTL3Q96JM7 780 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-244ENST00000593283 TMX4Q9H1E5 349 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-244ENST00000593283 SF3B3Q15393 1217 aaKnown RBP22.76■■□□□ 1.23
CIRBP-244ENST00000593283 G2E3Q7L622 706 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms