RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 CCDC102BQ68D86 513 aa6.94□□□□□ -1.3
LINC01539-206ENST00000593282 USP17L2Q6R6M4 530 aa6.94□□□□□ -1.3
LINC01539-206ENST00000593282 USP17L1Q7RTZ2 530 aa6.94□□□□□ -1.3
LINC01539-206ENST00000593282 RAB44Q7Z6P3 723 aaPredicted RBP6.94□□□□□ -1.3
LINC01539-206ENST00000593282 ZNF417Q8TAU3 575 aa6.94□□□□□ -1.3
LINC01539-206ENST00000593282 ZNF587Q96SQ5 575 aaPredicted RBP6.94□□□□□ -1.3
LINC01539-206ENST00000593282 ANKIB1Q9P2G1 1089 aa6.94□□□□□ -1.3
LINC01539-206ENST00000593282 HCN4Q9Y3Q4 1203 aa6.94□□□□□ -1.3
LINC01539-206ENST00000593282 MAFBQ9Y5Q3 323 aaPredicted RBP6.94□□□□□ -1.3
LINC01539-206ENST00000593282 TBC1D8BQ0IIM8 1120 aa6.93□□□□□ -1.3
LINC01539-206ENST00000593282 SLC30A3Q99726 388 aa6.93□□□□□ -1.3
LINC01539-206ENST00000593282 TSPAN10Q9H1Z9 355 aaPredicted RBP6.93□□□□□ -1.3
LINC01539-206ENST00000593282 BRD7Q9NPI1 651 aa6.93□□□□□ -1.3
LINC01539-206ENST00000593282 SFI1A8K8P3 1242 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 ADARB2-AS1A8MUL3 147 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 ADH7P40394 386 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
LINC01539-206ENST00000593282 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 HSH2DQ96JZ2 352 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 NACC1Q96RE7 527 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 PHACTR1Q9C0D0 580 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 KIAA1024Q9UPX6 916 aa6.92□□□□□ -1.3
LINC01539-206ENST00000593282 CARNS1A5YM72 827 aa6.91□□□□□ -1.3
LINC01539-206ENST00000593282 PPP1R12BO60237 982 aaPredicted RBP6.91□□□□□ -1.3
LINC01539-206ENST00000593282 C1orf53Q5VUE5 145 aa6.91□□□□□ -1.3
LINC01539-206ENST00000593282 PLEKHM2Q8IWE5 1019 aa6.91□□□□□ -1.3
LINC01539-206ENST00000593282 OGFOD1Q8N543 542 aa6.91□□□□□ -1.3
LINC01539-206ENST00000593282 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
LINC01539-206ENST00000593282 ZNF594Q96JF6 807 aaPredicted RBP6.91□□□□□ -1.3
LINC01539-206ENST00000593282 KCNH4Q9UQ05 1017 aa6.91□□□□□ -1.3
LINC01539-206ENST00000593282 ALBP02768 609 aa6.9□□□□□ -1.3
LINC01539-206ENST00000593282 CDK11BP21127 795 aaKnown RBP6.9□□□□□ -1.3
LINC01539-206ENST00000593282 CLDN10P78369 228 aa6.9□□□□□ -1.3
LINC01539-206ENST00000593282 ZMYM1Q5SVZ6 1142 aa6.9□□□□□ -1.3
LINC01539-206ENST00000593282 LARGE2Q8N3Y3 721 aa6.9□□□□□ -1.3
LINC01539-206ENST00000593282 BHMTQ93088 406 aa6.9□□□□□ -1.3
LINC01539-206ENST00000593282 UBE2OQ9C0C9 1292 aaKnown RBP6.9□□□□□ -1.3
LINC01539-206ENST00000593282 IGFLR1Q9H665 355 aa6.9□□□□□ -1.3
LINC01539-206ENST00000593282 MKRN1Q9UHC7 482 aaKnown RBP6.9□□□□□ -1.3
LINC01539-206ENST00000593282 CDK11AQ9UQ88 783 aaPredicted RBP6.9□□□□□ -1.3
LINC01539-206ENST00000593282 SCO2A0A1W2PP80 73 aa6.89□□□□□ -1.31
LINC01539-206ENST00000593282 ZBTB7BO15156 539 aaPredicted RBP6.89□□□□□ -1.31
LINC01539-206ENST00000593282 TRAPPC3LQ5T215 181 aa6.89□□□□□ -1.31
LINC01539-206ENST00000593282 KANK4Q5T7N3 995 aaPredicted RBP6.89□□□□□ -1.31
LINC01539-206ENST00000593282 C8orf86Q6ZUL3 223 aa6.89□□□□□ -1.31
LINC01539-206ENST00000593282 SND1Q7KZF4 910 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC01539-206ENST00000593282 MICALL1Q8N3F8 863 aa6.89□□□□□ -1.31
LINC01539-206ENST00000593282 TSEN2Q8NCE0 465 aaKnown RBP6.89□□□□□ -1.31
LINC01539-206ENST00000593282 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
LINC01539-206ENST00000593282 SUSD3Q96L08 255 aa6.89□□□□□ -1.31
LINC01539-206ENST00000593282 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
LINC01539-206ENST00000593282 M0R2N6 131 aa6.88□□□□□ -1.31
LINC01539-206ENST00000593282 HIRAP54198 1017 aaPredicted RBP6.88□□□□□ -1.31
LINC01539-206ENST00000593282 TYRO3Q06418 890 aa6.88□□□□□ -1.31
LINC01539-206ENST00000593282 HIF1AQ16665 826 aa6.88□□□□□ -1.31
LINC01539-206ENST00000593282 CHMP7Q8WUX9 453 aaPredicted RBP6.88□□□□□ -1.31
LINC01539-206ENST00000593282 USP35Q9P2H5 1018 aa6.88□□□□□ -1.31
LINC01539-206ENST00000593282 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
LINC01539-206ENST00000593282 LILRB5O75023 590 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 ATG7O95352 703 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 ALDH16A1Q8IZ83 802 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 ZNF280CQ8ND82 737 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 C7orf43Q8WVR3 580 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 PNMA5Q96PV4 448 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 MDFIQ99750 246 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 PRDM6Q9NQX0 595 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 IVNS1ABPQ9Y6Y0 642 aa6.87□□□□□ -1.31
LINC01539-206ENST00000593282 KCNQ4P56696 695 aa6.86□□□□□ -1.31
LINC01539-206ENST00000593282 GRIK4Q16099 956 aa6.86□□□□□ -1.31
LINC01539-206ENST00000593282 SIX5Q8N196 739 aa6.86□□□□□ -1.31
LINC01539-206ENST00000593282 JPH1Q9HDC5 661 aaPredicted RBP6.86□□□□□ -1.31
LINC01539-206ENST00000593282 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
LINC01539-206ENST00000593282 IGSF5Q9NSI5 407 aa6.86□□□□□ -1.31
LINC01539-206ENST00000593282 NID1P14543 1247 aa6.85□□□□□ -1.31
LINC01539-206ENST00000593282 RASA1P20936 1047 aa6.85□□□□□ -1.31
LINC01539-206ENST00000593282 RAC1P63000 192 aa6.85□□□□□ -1.31
LINC01539-206ENST00000593282 RSPO4Q2I0M5 234 aaPredicted RBP6.85□□□□□ -1.31
LINC01539-206ENST00000593282 SCG3Q8WXD2 468 aaKnown RBP6.85□□□□□ -1.31
LINC01539-206ENST00000593282 ATAD2Q6PL18 1390 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 UNCXA6NJT0 531 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 C9orf172C9J069 976 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 ITGB7P26010 798 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 BTLAQ7Z6A9 289 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 NUDT8Q8WV74 236 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 HINFPQ9BQA5 517 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 SLC6A14Q9UN76 642 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 NISCHQ9Y2I1 1504 aa6.84□□□□□ -1.31
LINC01539-206ENST00000593282 TMEM88BA6NKF7 163 aa6.83□□□□□ -1.32
LINC01539-206ENST00000593282 SEC13P55735 322 aa6.83□□□□□ -1.32
LINC01539-206ENST00000593282 COL9A3Q14050 684 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-206ENST00000593282 CRTC2Q53ET0 693 aaPredicted RBP6.83□□□□□ -1.32
LINC01539-206ENST00000593282 LARP1Q6PKG0 1096 aaKnown RBP6.83□□□□□ -1.32
LINC01539-206ENST00000593282 ZMIZ1Q9ULJ6 1067 aa6.83□□□□□ -1.32
LINC01539-206ENST00000593282 RBM47A0AV96 593 aaKnown RBP6.82□□□□□ -1.32
LINC01539-206ENST00000593282 DYRK3O43781 588 aa6.82□□□□□ -1.32
LINC01539-206ENST00000593282 EPB42P16452 691 aa6.82□□□□□ -1.32
LINC01539-206ENST00000593282 NKAPLQ5M9Q1 402 aa6.82□□□□□ -1.32
LINC01539-206ENST00000593282 POTEAQ6S8J7 498 aa6.82□□□□□ -1.32
LINC01539-206ENST00000593282 C20orf204Q6ZNR8 217 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms