RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 NPR1P16066 1061 aa17.37■□□□□ 0.37
H3F3B-213ENST00000593254 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
H3F3B-213ENST00000593254 MAP2K1Q02750 393 aaPredicted RBP17.37■□□□□ 0.37
H3F3B-213ENST00000593254 CLEC4GQ6UXB4 293 aa17.37■□□□□ 0.37
H3F3B-213ENST00000593254 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
H3F3B-213ENST00000593254 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
H3F3B-213ENST00000593254 RGL2O15211 777 aa17.36■□□□□ 0.37
H3F3B-213ENST00000593254 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
H3F3B-213ENST00000593254 CLEC11AQ9Y240 323 aa17.36■□□□□ 0.37
H3F3B-213ENST00000593254 RNF123Q5XPI4 1314 aa17.36■□□□□ 0.37
H3F3B-213ENST00000593254 NUP98P52948 1817 aa17.35■□□□□ 0.37
H3F3B-213ENST00000593254 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
H3F3B-213ENST00000593254 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
H3F3B-213ENST00000593254 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
H3F3B-213ENST00000593254 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
H3F3B-213ENST00000593254 SNED1Q8TER0 1413 aa17.35■□□□□ 0.37
H3F3B-213ENST00000593254 TNRC18O15417 2968 aaPredicted RBP17.34■□□□□ 0.37
H3F3B-213ENST00000593254 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
H3F3B-213ENST00000593254 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
H3F3B-213ENST00000593254 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
H3F3B-213ENST00000593254 GPC2Q8N158 579 aa17.34■□□□□ 0.37
H3F3B-213ENST00000593254 TSPYL4Q9UJ04 414 aa17.34■□□□□ 0.37
H3F3B-213ENST00000593254 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
H3F3B-213ENST00000593254 IARSP41252 1262 aaKnown RBP17.33■□□□□ 0.36
H3F3B-213ENST00000593254 RGS19P49795 217 aa17.33■□□□□ 0.36
H3F3B-213ENST00000593254 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
H3F3B-213ENST00000593254 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
H3F3B-213ENST00000593254 LTBP1Q14766 1721 aa17.33■□□□□ 0.36
H3F3B-213ENST00000593254 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
H3F3B-213ENST00000593254 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
H3F3B-213ENST00000593254 ADAMTS8Q9UP79 889 aa17.32■□□□□ 0.36
H3F3B-213ENST00000593254 RRP7AQ9Y3A4 280 aaKnown RBP17.32■□□□□ 0.36
H3F3B-213ENST00000593254 TRPM7Q96QT4 1865 aa17.32■□□□□ 0.36
H3F3B-213ENST00000593254 SYNE4Q8N205 404 aa17.31■□□□□ 0.36
H3F3B-213ENST00000593254 COL4A5P29400 1685 aa17.3■□□□□ 0.36
H3F3B-213ENST00000593254 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
H3F3B-213ENST00000593254 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
H3F3B-213ENST00000593254 HLFQ16534 295 aa17.3■□□□□ 0.36
H3F3B-213ENST00000593254 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
H3F3B-213ENST00000593254 PSMD1Q99460 953 aa17.3■□□□□ 0.36
H3F3B-213ENST00000593254 NIP7Q9Y221 180 aaKnown RBP eCLIP17.3■□□□□ 0.36
H3F3B-213ENST00000593254 ALDH1B1P30837 517 aa17.29■□□□□ 0.36
H3F3B-213ENST00000593254 MLLT1Q03111 559 aaPredicted RBP17.29■□□□□ 0.36
H3F3B-213ENST00000593254 CAPNS2Q96L46 248 aa17.29■□□□□ 0.36
H3F3B-213ENST00000593254 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
H3F3B-213ENST00000593254 PDE4DIPQ5VU43 2346 aa17.29■□□□□ 0.36
H3F3B-213ENST00000593254 MAP3K15Q6ZN16 1313 aa17.28■□□□□ 0.36
H3F3B-213ENST00000593254 ERVV-1B6SEH8 477 aa17.28■□□□□ 0.36
H3F3B-213ENST00000593254 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
H3F3B-213ENST00000593254 CHL1O00533 1208 aa17.27■□□□□ 0.36
H3F3B-213ENST00000593254 MYL6BP14649 208 aa17.27■□□□□ 0.36
H3F3B-213ENST00000593254 ECE1P42892 770 aa17.27■□□□□ 0.36
H3F3B-213ENST00000593254 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
H3F3B-213ENST00000593254 CRY2Q49AN0 593 aa17.27■□□□□ 0.36
H3F3B-213ENST00000593254 TTLL7Q6ZT98 887 aa17.27■□□□□ 0.36
H3F3B-213ENST00000593254 JDP2Q8WYK2 163 aa17.27■□□□□ 0.36
H3F3B-213ENST00000593254 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
H3F3B-213ENST00000593254 SCNN1DP51172 638 aa17.26■□□□□ 0.35
H3F3B-213ENST00000593254 PDIA6Q15084 440 aa17.26■□□□□ 0.35
H3F3B-213ENST00000593254 CST9Q5W186 159 aa17.26■□□□□ 0.35
H3F3B-213ENST00000593254 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
H3F3B-213ENST00000593254 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
H3F3B-213ENST00000593254 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
H3F3B-213ENST00000593254 PCDH10Q9P2E7 1040 aa17.26■□□□□ 0.35
H3F3B-213ENST00000593254 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
H3F3B-213ENST00000593254 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
H3F3B-213ENST00000593254 CASP8AP2Q9UKL3 1982 aa17.24■□□□□ 0.35
H3F3B-213ENST00000593254 EIF2S2P20042 333 aaKnown RBP17.24■□□□□ 0.35
H3F3B-213ENST00000593254 LMOD1P29536 600 aaPredicted RBP17.24■□□□□ 0.35
H3F3B-213ENST00000593254 EPS15P42566 896 aa17.24■□□□□ 0.35
H3F3B-213ENST00000593254 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
H3F3B-213ENST00000593254 CC2D2BQ6DHV5 1058 aa17.24■□□□□ 0.35
H3F3B-213ENST00000593254 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
H3F3B-213ENST00000593254 GJA3Q9Y6H8 435 aa17.24■□□□□ 0.35
H3F3B-213ENST00000593254 TLL2Q9Y6L7 1015 aa17.24■□□□□ 0.35
H3F3B-213ENST00000593254 IBTKQ9P2D0 1353 aaPredicted RBP17.24■□□□□ 0.35
H3F3B-213ENST00000593254 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
H3F3B-213ENST00000593254 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
H3F3B-213ENST00000593254 MAP2K2P36507 400 aa17.23■□□□□ 0.35
H3F3B-213ENST00000593254 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
H3F3B-213ENST00000593254 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
H3F3B-213ENST00000593254 ABCC12Q96J65 1359 aa17.23■□□□□ 0.35
H3F3B-213ENST00000593254 UBN2Q6ZU65 1347 aa17.22■□□□□ 0.35
H3F3B-213ENST00000593254 TRAF5O00463 557 aa17.22■□□□□ 0.35
H3F3B-213ENST00000593254 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
H3F3B-213ENST00000593254 GIGYF2Q6Y7W6 1299 aaKnown RBP17.22■□□□□ 0.35
H3F3B-213ENST00000593254 PAXIP1Q6ZW49 1069 aaPredicted RBP17.22■□□□□ 0.35
H3F3B-213ENST00000593254 NYXQ9GZU5 481 aa17.22■□□□□ 0.35
H3F3B-213ENST00000593254 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.35
H3F3B-213ENST00000593254 APAF1O14727 1248 aa17.21■□□□□ 0.35
H3F3B-213ENST00000593254 ANXA1P04083 346 aa17.21■□□□□ 0.35
H3F3B-213ENST00000593254 HOXA10P31260 410 aaPredicted RBP17.21■□□□□ 0.35
H3F3B-213ENST00000593254 GRIPAP1Q4V328 841 aa17.21■□□□□ 0.35
H3F3B-213ENST00000593254 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
H3F3B-213ENST00000593254 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
H3F3B-213ENST00000593254 TSKSQ9UJT2 592 aa17.21■□□□□ 0.35
H3F3B-213ENST00000593254 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
H3F3B-213ENST00000593254 AOC2O75106 756 aa17.2■□□□□ 0.34
H3F3B-213ENST00000593254 HOXB7P09629 217 aa17.2■□□□□ 0.34
H3F3B-213ENST00000593254 GPTP24298 496 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms