RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 KIAA1551Q9HCM1 1747 aa19■□□□□ 0.63
DDX39A-221ENST00000593026 F6X3S4 739 aa19■□□□□ 0.63
DDX39A-221ENST00000593026 TRMT112Q9UI30 125 aaKnown RBP19■□□□□ 0.63
DDX39A-221ENST00000593026 KIF16BQ96L93 1317 aa19■□□□□ 0.63
DDX39A-221ENST00000593026 N4BP2Q86UW6 1770 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-221ENST00000593026 ABCC12Q96J65 1359 aa18.99■□□□□ 0.63
DDX39A-221ENST00000593026 PDE6BP35913 854 aa18.99■□□□□ 0.63
DDX39A-221ENST00000593026 BRPF1P55201 1214 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-221ENST00000593026 ERFEQ4G0M1 354 aa18.99■□□□□ 0.63
DDX39A-221ENST00000593026 CCDC191Q8NCU4 936 aa18.99■□□□□ 0.63
DDX39A-221ENST00000593026 CWC25Q9NXE8 425 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-221ENST00000593026 SH3TC1Q8TE82 1336 aa18.99■□□□□ 0.63
DDX39A-221ENST00000593026 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
DDX39A-221ENST00000593026 IGKV5-2P06315 115 aa18.98■□□□□ 0.63
DDX39A-221ENST00000593026 CWF19L2Q2TBE0 894 aaKnown RBP18.98■□□□□ 0.63
DDX39A-221ENST00000593026 LINS1Q8NG48 757 aa18.98■□□□□ 0.63
DDX39A-221ENST00000593026 NOB1Q9ULX3 412 aaKnown RBP18.98■□□□□ 0.63
DDX39A-221ENST00000593026 RIC1Q4ADV7 1423 aa18.98■□□□□ 0.63
DDX39A-221ENST00000593026 NEURL1BA8MQ27 555 aa18.97■□□□□ 0.63
DDX39A-221ENST00000593026 BCAR3O75815 825 aa18.97■□□□□ 0.63
DDX39A-221ENST00000593026 DPEP1P16444 411 aa18.97■□□□□ 0.63
DDX39A-221ENST00000593026 SLC4A10Q6U841 1118 aa18.97■□□□□ 0.63
DDX39A-221ENST00000593026 TNRC6CQ9HCJ0 1690 aaKnown RBP18.96■□□□□ 0.63
DDX39A-221ENST00000593026 CHRNA5P30532 468 aa18.96■□□□□ 0.63
DDX39A-221ENST00000593026 C2CD5Q86YS7 1000 aa18.96■□□□□ 0.63
DDX39A-221ENST00000593026 FAM89AQ96GI7 184 aa18.96■□□□□ 0.63
DDX39A-221ENST00000593026 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
DDX39A-221ENST00000593026 COL11A2P13942 1736 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-221ENST00000593026 H0YIN7 160 aa18.95■□□□□ 0.62
DDX39A-221ENST00000593026 RTL5Q5HYW3 569 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-221ENST00000593026 BEND3Q5T5X7 828 aa18.95■□□□□ 0.62
DDX39A-221ENST00000593026 ZBTB38Q8NAP3 1195 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-221ENST00000593026 DLEC1Q9Y238 1755 aa18.95■□□□□ 0.62
DDX39A-221ENST00000593026 IPO8O15397 1037 aaKnown RBP18.94■□□□□ 0.62
DDX39A-221ENST00000593026 PCCAP05165 728 aaPredicted RBP18.94■□□□□ 0.62
DDX39A-221ENST00000593026 SLC10A5Q5PT55 438 aa18.94■□□□□ 0.62
DDX39A-221ENST00000593026 SYNE4Q8N205 404 aa18.94■□□□□ 0.62
DDX39A-221ENST00000593026 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
DDX39A-221ENST00000593026 API5Q9BZZ5 524 aaKnown RBP18.94■□□□□ 0.62
DDX39A-221ENST00000593026 HCLS1P14317 486 aaPredicted RBP18.93■□□□□ 0.62
DDX39A-221ENST00000593026 KCNA3P22001 575 aa18.93■□□□□ 0.62
DDX39A-221ENST00000593026 GCKRQ14397 625 aa18.93■□□□□ 0.62
DDX39A-221ENST00000593026 PELP1Q8IZL8 1130 aaKnown RBP18.93■□□□□ 0.62
DDX39A-221ENST00000593026 ARHGAP45Q92619 1136 aa18.93■□□□□ 0.62
DDX39A-221ENST00000593026 NLRP3Q96P20 1036 aa18.93■□□□□ 0.62
DDX39A-221ENST00000593026 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
DDX39A-221ENST00000593026 PIM2Q9P1W9 311 aa18.93■□□□□ 0.62
DDX39A-221ENST00000593026 WWC3Q9ULE0 1092 aa18.93■□□□□ 0.62
DDX39A-221ENST00000593026 DDX60Q8IY21 1712 aaKnown RBP18.92■□□□□ 0.62
DDX39A-221ENST00000593026 LAMB2P55268 1798 aa18.92■□□□□ 0.62
DDX39A-221ENST00000593026 KLRG2A4D1S0 409 aaPredicted RBP18.92■□□□□ 0.62
DDX39A-221ENST00000593026 ALDH1L1O75891 902 aa18.92■□□□□ 0.62
DDX39A-221ENST00000593026 SRGNP10124 158 aa18.92■□□□□ 0.62
DDX39A-221ENST00000593026 RCAN3Q9UKA8 241 aa18.92■□□□□ 0.62
DDX39A-221ENST00000593026 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
DDX39A-221ENST00000593026 IRS4O14654 1257 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-221ENST00000593026 HSP90B1P14625 803 aaKnown RBP18.91■□□□□ 0.62
DDX39A-221ENST00000593026 CRY2Q49AN0 593 aa18.91■□□□□ 0.62
DDX39A-221ENST00000593026 JARID2Q92833 1246 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-221ENST00000593026 ZNF622Q969S3 477 aaKnown RBP eCLIP18.91■□□□□ 0.625e-11■□□□□ 10.3
DDX39A-221ENST00000593026 MASTLQ96GX5 879 aa18.91■□□□□ 0.62
DDX39A-221ENST00000593026 NPR1P16066 1061 aa18.9■□□□□ 0.62
DDX39A-221ENST00000593026 GPR162Q16538 588 aa18.9■□□□□ 0.62
DDX39A-221ENST00000593026 ZKSCAN2Q63HK3 967 aa18.9■□□□□ 0.62
DDX39A-221ENST00000593026 STYK1Q6J9G0 422 aa18.9■□□□□ 0.62
DDX39A-221ENST00000593026 C3orf67Q6ZVT6 689 aa18.9■□□□□ 0.62
DDX39A-221ENST00000593026 UBE3BQ7Z3V4 1068 aa18.9■□□□□ 0.62
DDX39A-221ENST00000593026 CDHR2Q9BYE9 1310 aa18.9■□□□□ 0.62
DDX39A-221ENST00000593026 H7C1W4 665 aa18.89■□□□□ 0.61
DDX39A-221ENST00000593026 TRIM27P14373 513 aa18.89■□□□□ 0.61
DDX39A-221ENST00000593026 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.61
DDX39A-221ENST00000593026 RPGRQ92834 1020 aaKnown RBP18.89■□□□□ 0.61
DDX39A-221ENST00000593026 BCS1LQ9Y276 419 aa18.89■□□□□ 0.61
DDX39A-221ENST00000593026 CCT4P50991 539 aaKnown RBP18.88■□□□□ 0.61
DDX39A-221ENST00000593026 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
DDX39A-221ENST00000593026 TTLL6Q8N841 843 aa18.88■□□□□ 0.61
DDX39A-221ENST00000593026 GRM8O00222 908 aa18.87■□□□□ 0.61
DDX39A-221ENST00000593026 ABCC4O15439 1325 aa18.87■□□□□ 0.61
DDX39A-221ENST00000593026 PDE8AO60658 829 aa18.87■□□□□ 0.61
DDX39A-221ENST00000593026 YBX3P16989 372 aaKnown RBP eCLIP18.87■□□□□ 0.61
DDX39A-221ENST00000593026 YY1P25490 414 aa18.87■□□□□ 0.61
DDX39A-221ENST00000593026 CNKSR1Q969H4 720 aa18.87■□□□□ 0.61
DDX39A-221ENST00000593026 RBM17Q96I25 401 aaKnown RBP18.87■□□□□ 0.61
DDX39A-221ENST00000593026 C9orf78Q9NZ63 289 aaPredicted RBP18.87■□□□□ 0.61
DDX39A-221ENST00000593026 CLUAP1Q96AJ1 413 aa18.86■□□□□ 0.61
DDX39A-221ENST00000593026 CACNA1SQ13698 1873 aa18.86■□□□□ 0.61
DDX39A-221ENST00000593026 ALDH1B1P30837 517 aa18.85■□□□□ 0.61
DDX39A-221ENST00000593026 HOXA10P31260 410 aaPredicted RBP18.85■□□□□ 0.61
DDX39A-221ENST00000593026 CASP7P55210 303 aa18.85■□□□□ 0.61
DDX39A-221ENST00000593026 SF3B3Q15393 1217 aaKnown RBP18.85■□□□□ 0.61
DDX39A-221ENST00000593026 PRPF40BQ6NWY9 871 aaKnown RBP18.85■□□□□ 0.61
DDX39A-221ENST00000593026 TNNQ9UQP3 1299 aa18.85■□□□□ 0.61
DDX39A-221ENST00000593026 ARFGEF1Q9Y6D6 1849 aa18.85■□□□□ 0.61
DDX39A-221ENST00000593026 FTSJ3Q8IY81 847 aaKnown RBP18.84■□□□□ 0.61
DDX39A-221ENST00000593026 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
DDX39A-221ENST00000593026 MYH3P11055 1940 aa18.83■□□□□ 0.6
DDX39A-221ENST00000593026 GRIN3BO60391 1043 aa18.83■□□□□ 0.6
DDX39A-221ENST00000593026 CTSWP56202 376 aa18.83■□□□□ 0.6
DDX39A-221ENST00000593026 CCDC152Q4G0S7 254 aa18.83■□□□□ 0.6
DDX39A-221ENST00000593026 INTS3Q68E01 1043 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms