RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 SPG7Q9UQ90 795 aa10.16□□□□□ -0.78
SDF2-210ENST00000592250 MAP3K5Q99683 1374 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 GNAT3A8MTJ3 354 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 GPR37O15354 613 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 PHKG2P15735 406 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 RRP1P56182 461 aaKnown RBP10.15□□□□□ -0.78
SDF2-210ENST00000592250 GNAI1P63096 354 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 FAM161AQ3B820 660 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 PLEKHO1Q53GL0 409 aaPredicted RBP10.15□□□□□ -0.78
SDF2-210ENST00000592250 MCM10Q7L590 875 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 DDX54Q8TDD1 881 aaKnown RBP10.15□□□□□ -0.78
SDF2-210ENST00000592250 TSR2Q969E8 191 aaKnown RBP10.15□□□□□ -0.78
SDF2-210ENST00000592250 LRCH3Q96II8 777 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 SPON1Q9HCB6 807 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 MBIPQ9NS73 344 aa10.15□□□□□ -0.78
SDF2-210ENST00000592250 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
SDF2-210ENST00000592250 TNS1Q9HBL0 1735 aaKnown RBP10.14□□□□□ -0.79
SDF2-210ENST00000592250 RARSP54136 660 aaKnown RBP10.14□□□□□ -0.79
SDF2-210ENST00000592250 EXOSC9Q06265 439 aaKnown RBP10.14□□□□□ -0.79
SDF2-210ENST00000592250 AKAP4Q5JQC9 854 aa10.14□□□□□ -0.79
SDF2-210ENST00000592250 ERICH6BQ5W0A0 696 aa10.14□□□□□ -0.79
SDF2-210ENST00000592250 IFNL2Q8IZJ0 200 aa10.14□□□□□ -0.79
SDF2-210ENST00000592250 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
SDF2-210ENST00000592250 TOGARAM1Q9Y4F4 1720 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 NHSQ6T4R5 1651 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 SBF2Q86WG5 1849 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 FECHP22830 423 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 HIC1Q14526 733 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 BABAM1Q9NWV8 329 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 DOT1LQ8TEK3 1739 aa10.13□□□□□ -0.79
SDF2-210ENST00000592250 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
SDF2-210ENST00000592250 KCNQ2O43526 872 aa10.12□□□□□ -0.79
SDF2-210ENST00000592250 VAMP4O75379 141 aa10.12□□□□□ -0.79
SDF2-210ENST00000592250 BRPF1P55201 1214 aaPredicted RBP10.12□□□□□ -0.79
SDF2-210ENST00000592250 LGR6Q9HBX8 967 aa10.12□□□□□ -0.79
SDF2-210ENST00000592250 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
SDF2-210ENST00000592250 KDM6AO15550 1401 aaPredicted RBP10.12□□□□□ -0.79
SDF2-210ENST00000592250 SIPA1L3O60292 1781 aaPredicted RBP10.11□□□□□ -0.79
SDF2-210ENST00000592250 GNPATO15228 680 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 RNMTO43148 476 aaKnown RBP10.11□□□□□ -0.79
SDF2-210ENST00000592250 BCAR3O75815 825 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 ZNF530Q6P9A1 599 aaPredicted RBP10.11□□□□□ -0.79
SDF2-210ENST00000592250 PTF1AQ7RTS3 328 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 TSPYL6Q8N831 410 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
SDF2-210ENST00000592250 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 DCAF5Q96JK2 942 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 TSR3Q9UJK0 312 aaKnown RBP10.11□□□□□ -0.79
SDF2-210ENST00000592250 SCN11AQ9UI33 1791 aa10.11□□□□□ -0.79
SDF2-210ENST00000592250 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
SDF2-210ENST00000592250 TAF7Q15545 349 aaPredicted RBP10.1□□□□□ -0.79
SDF2-210ENST00000592250 C1orf141Q5JVX7 400 aa10.1□□□□□ -0.79
SDF2-210ENST00000592250 GPIHBP1Q8IV16 184 aa10.1□□□□□ -0.79
SDF2-210ENST00000592250 C8orf58Q8NAV2 365 aa10.1□□□□□ -0.79
SDF2-210ENST00000592250 ACSBG1Q96GR2 724 aa10.1□□□□□ -0.79
SDF2-210ENST00000592250 KDM3BQ7LBC6 1761 aa10.09□□□□□ -0.79
SDF2-210ENST00000592250 PLIN1O60240 522 aa10.09□□□□□ -0.79
SDF2-210ENST00000592250 ZBTB7AO95365 584 aa10.09□□□□□ -0.79
SDF2-210ENST00000592250 NEFLP07196 543 aa10.09□□□□□ -0.79
SDF2-210ENST00000592250 IRX6P78412 446 aaPredicted RBP10.09□□□□□ -0.79
SDF2-210ENST00000592250 ALDH1L2Q3SY69 923 aa10.09□□□□□ -0.79
SDF2-210ENST00000592250 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
SDF2-210ENST00000592250 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
SDF2-210ENST00000592250 SSH1Q8WYL5 1049 aa10.09□□□□□ -0.79
SDF2-210ENST00000592250 MRC1P22897 1456 aa10.09□□□□□ -0.79
SDF2-210ENST00000592250 ERVV-2B6SEH9 535 aa10.08□□□□□ -0.8
SDF2-210ENST00000592250 TULP1O00294 542 aaPredicted RBP10.08□□□□□ -0.8
SDF2-210ENST00000592250 C20orf194Q5TEA3 1177 aa10.08□□□□□ -0.8
SDF2-210ENST00000592250 MPRIPQ6WCQ1 1025 aa10.08□□□□□ -0.8
SDF2-210ENST00000592250 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.08□□□□□ -0.8
SDF2-210ENST00000592250 ZNF784Q8NCA9 323 aaPredicted RBP10.08□□□□□ -0.8
SDF2-210ENST00000592250 LAS1LQ9Y4W2 734 aaKnown RBP10.08□□□□□ -0.8
SDF2-210ENST00000592250 HEG1Q9ULI3 1381 aa10.08□□□□□ -0.8
SDF2-210ENST00000592250 NUP188Q5SRE5 1749 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 BTAF1O14981 1849 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 ITGB4P16144 1822 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 RGPD3A6NKT7 1758 aaPredicted RBP10.07□□□□□ -0.8
SDF2-210ENST00000592250 RGPD4Q7Z3J3 1758 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 PLSCR1O15162 318 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 PPP4CP60510 307 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 KRT24Q2M2I5 525 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 TWISTNBQ3B726 338 aaPredicted RBP10.07□□□□□ -0.8
SDF2-210ENST00000592250 MIS18AQ9NYP9 233 aa10.07□□□□□ -0.8
SDF2-210ENST00000592250 SOS1Q07889 1333 aaPredicted RBP10.07□□□□□ -0.8
SDF2-210ENST00000592250 RCCD1A6NED2 376 aa10.06□□□□□ -0.8
SDF2-210ENST00000592250 PDE3AQ14432 1141 aa10.06□□□□□ -0.8
SDF2-210ENST00000592250 PIGBQ92521 554 aa10.06□□□□□ -0.8
SDF2-210ENST00000592250 SYTL4Q96C24 671 aaPredicted RBP10.06□□□□□ -0.8
SDF2-210ENST00000592250 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
SDF2-210ENST00000592250 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
SDF2-210ENST00000592250 EIF4A1P60842 406 aaKnown RBP10.05□□□□□ -0.8
SDF2-210ENST00000592250 NYAP1Q6ZVC0 841 aa10.05□□□□□ -0.8
SDF2-210ENST00000592250 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.05□□□□□ -0.8
SDF2-210ENST00000592250 NFATC2IPQ8NCF5 419 aa10.05□□□□□ -0.8
SDF2-210ENST00000592250 PXYLP1Q8TE99 480 aa10.05□□□□□ -0.8
SDF2-210ENST00000592250 SLC52A2Q9HAB3 445 aa10.05□□□□□ -0.8
SDF2-210ENST00000592250 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
SDF2-210ENST00000592250 RREB1Q92766 1687 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms