RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 SYNE4Q8N205 404 aa23.99■■□□□ 1.43
CIRBP-237ENST00000592234 LAS1LQ9Y4W2 734 aaKnown RBP23.99■■□□□ 1.43
CIRBP-237ENST00000592234 IQCA1LA6NCM1 817 aa23.98■■□□□ 1.43
CIRBP-237ENST00000592234 IARSP41252 1262 aaKnown RBP23.98■■□□□ 1.43
CIRBP-237ENST00000592234 RBM17Q96I25 401 aaKnown RBP23.98■■□□□ 1.43
CIRBP-237ENST00000592234 CHL1O00533 1208 aa23.97■■□□□ 1.43
CIRBP-237ENST00000592234 HOXA10P31260 410 aaPredicted RBP23.97■■□□□ 1.43
CIRBP-237ENST00000592234 CC2D2BQ6DHV5 1058 aa23.97■■□□□ 1.43
CIRBP-237ENST00000592234 ADAMTS8Q9UP79 889 aa23.97■■□□□ 1.43
CIRBP-237ENST00000592234 TRIM35Q9UPQ4 493 aa23.97■■□□□ 1.43
CIRBP-237ENST00000592234 ZNF541Q9H0D2 1346 aa23.96■■□□□ 1.43
CIRBP-237ENST00000592234 AIMP1Q12904 312 aaKnown RBP23.96■■□□□ 1.43
CIRBP-237ENST00000592234 CHADLQ6NUI6 762 aa23.96■■□□□ 1.43
CIRBP-237ENST00000592234 COPS6Q7L5N1 327 aa23.96■■□□□ 1.43
CIRBP-237ENST00000592234 JMYQ8N9B5 988 aa23.96■■□□□ 1.43
CIRBP-237ENST00000592234 L3MBTL3Q96JM7 780 aaPredicted RBP23.96■■□□□ 1.43
CIRBP-237ENST00000592234 PSMD1Q99460 953 aa23.96■■□□□ 1.43
CIRBP-237ENST00000592234 UTP14AQ9BVJ6 771 aaKnown RBP23.96■■□□□ 1.43
CIRBP-237ENST00000592234 SNED1Q8TER0 1413 aa23.95■■□□□ 1.42
CIRBP-237ENST00000592234 KRT24Q2M2I5 525 aa23.95■■□□□ 1.42
CIRBP-237ENST00000592234 XAGE3Q8WTP9 111 aa23.95■■□□□ 1.42
CIRBP-237ENST00000592234 NLRP3Q96P20 1036 aa23.95■■□□□ 1.42
CIRBP-237ENST00000592234 CRAMP1Q96RY5 1269 aa23.95■■□□□ 1.42
CIRBP-237ENST00000592234 LAMB2P55268 1798 aa23.94■■□□□ 1.42
CIRBP-237ENST00000592234 POTEIP0CG38 1075 aa23.94■■□□□ 1.42
CIRBP-237ENST00000592234 POTEJP0CG39 1038 aa23.94■■□□□ 1.42
CIRBP-237ENST00000592234 HSP90AB3PQ58FF7 597 aa23.94■■□□□ 1.42
CIRBP-237ENST00000592234 PRKRIP1Q9H875 184 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-237ENST00000592234 DDX21Q9NR30 783 aaKnown RBP eCLIP23.94■■□□□ 1.42
CIRBP-237ENST00000592234 PPEF1O14829 653 aaPredicted RBP23.93■■□□□ 1.42
CIRBP-237ENST00000592234 C3orf67Q6ZVT6 689 aa23.93■■□□□ 1.42
CIRBP-237ENST00000592234 JDP2Q8WYK2 163 aa23.93■■□□□ 1.42
CIRBP-237ENST00000592234 FZD9O00144 591 aa23.92■■□□□ 1.42
CIRBP-237ENST00000592234 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
CIRBP-237ENST00000592234 GRIPAP1Q4V328 841 aa23.92■■□□□ 1.42
CIRBP-237ENST00000592234 TAF1DQ9H5J8 278 aaPredicted RBP23.92■■□□□ 1.42
CIRBP-237ENST00000592234 RNF123Q5XPI4 1314 aa23.91■■□□□ 1.42
CIRBP-237ENST00000592234 SLC10A5Q5PT55 438 aa23.91■■□□□ 1.42
CIRBP-237ENST00000592234 LDHDQ86WU2 507 aa23.91■■□□□ 1.42
CIRBP-237ENST00000592234 HACL1Q9UJ83 578 aa23.91■■□□□ 1.42
CIRBP-237ENST00000592234 HDGFL1Q5TGJ6 251 aa23.9■■□□□ 1.42
CIRBP-237ENST00000592234 TMX4Q9H1E5 349 aaPredicted RBP23.9■■□□□ 1.42
CIRBP-237ENST00000592234 CHPF2Q9P2E5 772 aa23.9■■□□□ 1.42
CIRBP-237ENST00000592234 HOXB7P09629 217 aa23.89■■□□□ 1.41
CIRBP-237ENST00000592234 TCIRG1Q13488 830 aa23.89■■□□□ 1.41
CIRBP-237ENST00000592234 EAPPQ56P03 285 aaPredicted RBP23.89■■□□□ 1.41
CIRBP-237ENST00000592234 NLRP10Q86W26 655 aa23.89■■□□□ 1.41
CIRBP-237ENST00000592234 CFAP44Q96MT7 982 aa23.89■■□□□ 1.41
CIRBP-237ENST00000592234 PCNTO95613 3336 aa23.88■■□□□ 1.41
CIRBP-237ENST00000592234 EIF6P56537 245 aaKnown RBP23.88■■□□□ 1.41
CIRBP-237ENST00000592234 GPC2Q8N158 579 aa23.88■■□□□ 1.41
CIRBP-237ENST00000592234 LARGE2Q8N3Y3 721 aa23.88■■□□□ 1.41
CIRBP-237ENST00000592234 COL4A5P29400 1685 aa23.87■■□□□ 1.41
CIRBP-237ENST00000592234 EPHX2P34913 555 aa23.87■■□□□ 1.41
CIRBP-237ENST00000592234 SLC51AQ86UW1 340 aa23.87■■□□□ 1.41
CIRBP-237ENST00000592234 TRMT112Q9UI30 125 aaKnown RBP23.87■■□□□ 1.41
CIRBP-237ENST00000592234 ABCC4O15439 1325 aa23.86■■□□□ 1.41
CIRBP-237ENST00000592234 HCLS1P14317 486 aaPredicted RBP23.86■■□□□ 1.41
CIRBP-237ENST00000592234 CREBZFQ9NS37 354 aa23.86■■□□□ 1.41
CIRBP-237ENST00000592234 DBF4Q9UBU7 674 aaPredicted RBP23.86■■□□□ 1.41
CIRBP-237ENST00000592234 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
CIRBP-237ENST00000592234 ATP6V0A2Q9Y487 856 aa23.86■■□□□ 1.41
CIRBP-237ENST00000592234 SH3TC1Q8TE82 1336 aa23.85■■□□□ 1.41
CIRBP-237ENST00000592234 TAF1P21675 1872 aa23.85■■□□□ 1.41
CIRBP-237ENST00000592234 MBIPQ9NS73 344 aa23.85■■□□□ 1.41
CIRBP-237ENST00000592234 GJA3Q9Y6H8 435 aa23.85■■□□□ 1.41
CIRBP-237ENST00000592234 ADAMTSL1Q8N6G6 1762 aa23.85■■□□□ 1.41
CIRBP-237ENST00000592234 DUSP27Q5VZP5 1158 aa23.84■■□□□ 1.41
CIRBP-237ENST00000592234 PNMA8AQ86V59 439 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-237ENST00000592234 PLBD2Q8NHP8 589 aa23.84■■□□□ 1.41
CIRBP-237ENST00000592234 APAF1O14727 1248 aa23.83■■□□□ 1.41
CIRBP-237ENST00000592234 PPIP5K2O43314 1243 aa23.83■■□□□ 1.41
CIRBP-237ENST00000592234 ANKRD13DQ6ZTN6 518 aa23.83■■□□□ 1.41
CIRBP-237ENST00000592234 NIM1KQ8IY84 436 aa23.83■■□□□ 1.41
CIRBP-237ENST00000592234 DDX60Q8IY21 1712 aaKnown RBP23.83■■□□□ 1.41
CIRBP-237ENST00000592234 PASKQ96RG2 1323 aa23.83■■□□□ 1.4
CIRBP-237ENST00000592234 ZNF316A6NFI3 1004 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-237ENST00000592234 BBOX1O75936 387 aa23.82■■□□□ 1.4
CIRBP-237ENST00000592234 DDX46Q7L014 1031 aaKnown RBP23.82■■□□□ 1.4
CIRBP-237ENST00000592234 ZNF428Q96B54 188 aa23.82■■□□□ 1.4
CIRBP-237ENST00000592234 HYPKQ9NX55 129 aa23.82■■□□□ 1.4
CIRBP-237ENST00000592234 LMOD1P29536 600 aaPredicted RBP23.81■■□□□ 1.4
CIRBP-237ENST00000592234 SUPT20HQ8NEM7 779 aa23.81■■□□□ 1.4
CIRBP-237ENST00000592234 ZNF853P0CG23 659 aa23.8■■□□□ 1.4
CIRBP-237ENST00000592234 GNAI1P63096 354 aa23.8■■□□□ 1.4
CIRBP-237ENST00000592234 CALD1Q05682 793 aaKnown RBP23.8■■□□□ 1.4
CIRBP-237ENST00000592234 LTBP1Q14766 1721 aa23.8■■□□□ 1.4
CIRBP-237ENST00000592234 AOC3Q16853 763 aa23.8■■□□□ 1.4
CIRBP-237ENST00000592234 SP8Q8IXZ3 490 aa23.8■■□□□ 1.4
CIRBP-237ENST00000592234 VPS33BQ9H267 617 aa23.8■■□□□ 1.4
CIRBP-237ENST00000592234 IFT57Q9NWB7 429 aa23.8■■□□□ 1.4
CIRBP-237ENST00000592234 MKRN1Q9UHC7 482 aaKnown RBP23.8■■□□□ 1.4
CIRBP-237ENST00000592234 ITGBL1O95965 494 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-237ENST00000592234 GRAPQ13588 217 aa23.79■■□□□ 1.4
CIRBP-237ENST00000592234 DPP8Q6V1X1 898 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-237ENST00000592234 GRAPLQ8TC17 118 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-237ENST00000592234 ISCA1Q9BUE6 129 aa23.79■■□□□ 1.4
CIRBP-237ENST00000592234 ATP5J2-PTCD1G3V325 749 aa23.78■■□□□ 1.4
CIRBP-237ENST00000592234 HSPA1AP0DMV8 641 aaKnown RBP23.78■■□□□ 1.4
CIRBP-237ENST00000592234 HSPA1BP0DMV9 641 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms