RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 L1TD1Q5T7N2 865 aaKnown RBP16.65■□□□□ 0.26
GFAP-221ENST00000592065 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
GFAP-221ENST00000592065 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
GFAP-221ENST00000592065 BRPF1P55201 1214 aaPredicted RBP16.64■□□□□ 0.25
GFAP-221ENST00000592065 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
GFAP-221ENST00000592065 SCN7AQ01118 1682 aa16.64■□□□□ 0.25
GFAP-221ENST00000592065 PXDNLA1KZ92 1463 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 DPEP1P16444 411 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 MCM4P33991 863 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 NUCB1Q02818 461 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 CFAP44Q96MT7 982 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 SERPINB2P05120 415 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 PDIA6Q15084 440 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
GFAP-221ENST00000592065 C8orf58Q8NAV2 365 aa16.62■□□□□ 0.25
GFAP-221ENST00000592065 CHPF2Q9P2E5 772 aa16.62■□□□□ 0.25
GFAP-221ENST00000592065 C10orf71Q711Q0 1435 aa16.62■□□□□ 0.25
GFAP-221ENST00000592065 GPTP24298 496 aa16.62■□□□□ 0.25
GFAP-221ENST00000592065 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
GFAP-221ENST00000592065 KIAA1551Q9HCM1 1747 aa16.61■□□□□ 0.25
GFAP-221ENST00000592065 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
GFAP-221ENST00000592065 ZNF853P0CG23 659 aa16.6■□□□□ 0.25
GFAP-221ENST00000592065 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
GFAP-221ENST00000592065 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
GFAP-221ENST00000592065 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
GFAP-221ENST00000592065 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
GFAP-221ENST00000592065 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
GFAP-221ENST00000592065 NIP7Q9Y221 180 aaKnown RBP eCLIP16.59■□□□□ 0.25
GFAP-221ENST00000592065 NPHP1O15259 732 aa16.59■□□□□ 0.25
GFAP-221ENST00000592065 KCNA3P22001 575 aa16.59■□□□□ 0.25
GFAP-221ENST00000592065 DDIT3P35638 169 aa16.59■□□□□ 0.25
GFAP-221ENST00000592065 A0A087WZG4 1122 aa16.58■□□□□ 0.25
GFAP-221ENST00000592065 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.25
GFAP-221ENST00000592065 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.25
GFAP-221ENST00000592065 NUTM1Q86Y26 1132 aa16.58■□□□□ 0.25
GFAP-221ENST00000592065 SNX21Q969T3 373 aa16.58■□□□□ 0.25
GFAP-221ENST00000592065 COPS6Q7L5N1 327 aa16.58■□□□□ 0.24
GFAP-221ENST00000592065 HSCBQ8IWL3 235 aa16.58■□□□□ 0.24
GFAP-221ENST00000592065 SETDB2Q96T68 719 aa16.58■□□□□ 0.24
GFAP-221ENST00000592065 IFT57Q9NWB7 429 aa16.58■□□□□ 0.24
GFAP-221ENST00000592065 KIF13BQ9NQT8 1826 aa16.58■□□□□ 0.24
GFAP-221ENST00000592065 DCAF8L1A6NGE4 600 aa16.57■□□□□ 0.24
GFAP-221ENST00000592065 YY1P25490 414 aa16.57■□□□□ 0.24
GFAP-221ENST00000592065 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
GFAP-221ENST00000592065 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
GFAP-221ENST00000592065 CEP350Q5VT06 3117 aa16.57■□□□□ 0.24
GFAP-221ENST00000592065 BMP2KLQ5H9B9 411 aa16.57■□□□□ 0.24
GFAP-221ENST00000592065 SLC51AQ86UW1 340 aa16.57■□□□□ 0.24
GFAP-221ENST00000592065 LNPKQ9C0E8 428 aa16.57■□□□□ 0.24
GFAP-221ENST00000592065 UBN2Q6ZU65 1347 aa16.56■□□□□ 0.24
GFAP-221ENST00000592065 GNAI1P63096 354 aa16.56■□□□□ 0.24
GFAP-221ENST00000592065 ARHGAP45Q92619 1136 aa16.56■□□□□ 0.24
GFAP-221ENST00000592065 PHAXQ9H814 394 aaKnown RBP16.56■□□□□ 0.24
GFAP-221ENST00000592065 ANKRD31Q8N7Z5 1873 aa16.56■□□□□ 0.24
GFAP-221ENST00000592065 ZBTB7BO15156 539 aaPredicted RBP16.56■□□□□ 0.24
GFAP-221ENST00000592065 NUP98P52948 1817 aa16.56■□□□□ 0.24
GFAP-221ENST00000592065 GOLGA6L3A6NEY3 463 aa16.55■□□□□ 0.24
GFAP-221ENST00000592065 VAMP4O75379 141 aa16.55■□□□□ 0.24
GFAP-221ENST00000592065 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
GFAP-221ENST00000592065 GLIPR1L2Q4G1C9 344 aa16.55■□□□□ 0.24
GFAP-221ENST00000592065 NBPF5PQ86XG9 351 aaPredicted RBP16.55■□□□□ 0.24
GFAP-221ENST00000592065 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
GFAP-221ENST00000592065 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
GFAP-221ENST00000592065 TRAK2O60296 914 aa16.54■□□□□ 0.24
GFAP-221ENST00000592065 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
GFAP-221ENST00000592065 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
GFAP-221ENST00000592065 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
GFAP-221ENST00000592065 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
GFAP-221ENST00000592065 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
GFAP-221ENST00000592065 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
GFAP-221ENST00000592065 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
GFAP-221ENST00000592065 BRCA1P38398 1863 aaKnown RBP16.53■□□□□ 0.24
GFAP-221ENST00000592065 BABAM1Q9NWV8 329 aa16.53■□□□□ 0.24
GFAP-221ENST00000592065 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
GFAP-221ENST00000592065 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
GFAP-221ENST00000592065 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
GFAP-221ENST00000592065 ABCC12Q96J65 1359 aa16.52■□□□□ 0.24
GFAP-221ENST00000592065 CACNA1SQ13698 1873 aa16.52■□□□□ 0.24
GFAP-221ENST00000592065 TGFB2P61812 414 aa16.52■□□□□ 0.23
GFAP-221ENST00000592065 C2CD5Q86YS7 1000 aa16.52■□□□□ 0.23
GFAP-221ENST00000592065 ZNF622Q969S3 477 aaKnown RBP eCLIP16.52■□□□□ 0.23
GFAP-221ENST00000592065 KIF2CQ99661 725 aa16.52■□□□□ 0.23
GFAP-221ENST00000592065 DDX21Q9NR30 783 aaKnown RBP eCLIP16.52■□□□□ 0.23
GFAP-221ENST00000592065 ZNF652Q9Y2D9 606 aa16.52■□□□□ 0.23
GFAP-221ENST00000592065 ABCC4O15439 1325 aa16.52■□□□□ 0.23
GFAP-221ENST00000592065 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
GFAP-221ENST00000592065 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
GFAP-221ENST00000592065 OLFM4Q6UX06 510 aa16.51■□□□□ 0.23
GFAP-221ENST00000592065 CIZ1Q9ULV3 898 aaPredicted RBP16.51■□□□□ 0.23
GFAP-221ENST00000592065 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
GFAP-221ENST00000592065 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
GFAP-221ENST00000592065 ERFEQ4G0M1 354 aa16.5■□□□□ 0.23
GFAP-221ENST00000592065 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
GFAP-221ENST00000592065 ZNF526Q8TF50 670 aaPredicted RBP16.5■□□□□ 0.23
GFAP-221ENST00000592065 PCNTO95613 3336 aa16.5■□□□□ 0.23
GFAP-221ENST00000592065 TWISTNBQ3B726 338 aaPredicted RBP16.5■□□□□ 0.23
GFAP-221ENST00000592065 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
GFAP-221ENST00000592065 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms