RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 LTBP1Q14766 1721 aa30.16■■■□□ 2.42
LSM7-206ENST00000591515 FAM161AQ3B820 660 aa30.16■■■□□ 2.42
LSM7-206ENST00000591515 CNTROBQ8N137 903 aa30.16■■■□□ 2.42
LSM7-206ENST00000591515 NGEFQ8N5V2 710 aa30.16■■■□□ 2.42
LSM7-206ENST00000591515 KLRG2A4D1S0 409 aaPredicted RBP30.15■■■□□ 2.42
LSM7-206ENST00000591515 WDR33Q9C0J8 1336 aaKnown RBP30.15■■■□□ 2.42
LSM7-206ENST00000591515 PNMA8AQ86V59 439 aaPredicted RBP30.14■■■□□ 2.42
LSM7-206ENST00000591515 FZD9O00144 591 aa30.13■■■□□ 2.41
LSM7-206ENST00000591515 CLEC4GQ6UXB4 293 aa30.13■■■□□ 2.41
LSM7-206ENST00000591515 USP16Q9Y5T5 823 aa30.13■■■□□ 2.41
LSM7-206ENST00000591515 SNED1Q8TER0 1413 aa30.13■■■□□ 2.41
LSM7-206ENST00000591515 IARSP41252 1262 aaKnown RBP30.12■■■□□ 2.41
LSM7-206ENST00000591515 BABAM1Q9NWV8 329 aa30.12■■■□□ 2.41
LSM7-206ENST00000591515 COL4A5P29400 1685 aa30.11■■■□□ 2.41
LSM7-206ENST00000591515 MAP2K1Q02750 393 aaPredicted RBP30.11■■■□□ 2.41
LSM7-206ENST00000591515 RTKN2Q8IZC4 609 aa30.11■■■□□ 2.41
LSM7-206ENST00000591515 ABT1Q9ULW3 272 aaKnown RBP30.11■■■□□ 2.41
LSM7-206ENST00000591515 TRIM35Q9UPQ4 493 aa30.11■■■□□ 2.41
LSM7-206ENST00000591515 PRAMEF22A3QJZ6 481 aa30.1■■■□□ 2.41
LSM7-206ENST00000591515 CCDC27Q2M243 656 aa30.1■■■□□ 2.41
LSM7-206ENST00000591515 THUMPD2Q9BTF0 503 aaKnown RBP30.1■■■□□ 2.41
LSM7-206ENST00000591515 GPC2Q8N158 579 aa30.09■■■□□ 2.41
LSM7-206ENST00000591515 SYNE4Q8N205 404 aa30.09■■■□□ 2.41
LSM7-206ENST00000591515 ZNF652Q9Y2D9 606 aa30.09■■■□□ 2.41
LSM7-206ENST00000591515 DDX21Q9NR30 783 aaKnown RBP eCLIP30.07■■■□□ 2.4
LSM7-206ENST00000591515 TPTE2Q6XPS3 522 aa30.06■■■□□ 2.4
LSM7-206ENST00000591515 NIP7Q9Y221 180 aaKnown RBP eCLIP30.06■■■□□ 2.4
LSM7-206ENST00000591515 FMR1Q06787 632 aaKnown RBP eCLIP30.05■■■□□ 2.4
LSM7-206ENST00000591515 TSPYL4Q9UJ04 414 aa30.05■■■□□ 2.4
LSM7-206ENST00000591515 NUP98P52948 1817 aa30.04■■■□□ 2.4
LSM7-206ENST00000591515 FAM177BA6PVY3 158 aa30.04■■■□□ 2.4
LSM7-206ENST00000591515 LAMB4A4D0S4 1761 aa30.03■■■□□ 2.4
LSM7-206ENST00000591515 NBPF26B4DH59 902 aa30.02■■■□□ 2.4
LSM7-206ENST00000591515 ALDH1B1P30837 517 aa30.02■■■□□ 2.4
LSM7-206ENST00000591515 NBPF10Q6P3W6 841 aaKnown RBP30.02■■■□□ 2.4
LSM7-206ENST00000591515 NBPF15Q8N660 670 aa30.02■■■□□ 2.4
LSM7-206ENST00000591515 CAPNS2Q96L46 248 aa30.02■■■□□ 2.4
LSM7-206ENST00000591515 PSMD1Q99460 953 aa30.02■■■□□ 2.4
LSM7-206ENST00000591515 RGL2O15211 777 aa30.01■■■□□ 2.39
LSM7-206ENST00000591515 GNAI1P63096 354 aa30.01■■■□□ 2.39
LSM7-206ENST00000591515 LAS1LQ9Y4W2 734 aaKnown RBP30.01■■■□□ 2.39
LSM7-206ENST00000591515 CCDC85CA6NKD9 419 aa30■■■□□ 2.39
LSM7-206ENST00000591515 JDP2Q8WYK2 163 aa30■■■□□ 2.39
LSM7-206ENST00000591515 CFAP44Q96MT7 982 aa30■■■□□ 2.39
LSM7-206ENST00000591515 GJA3Q9Y6H8 435 aa30■■■□□ 2.39
LSM7-206ENST00000591515 ABCC12Q96J65 1359 aa30■■■□□ 2.39
LSM7-206ENST00000591515 KDM3BQ7LBC6 1761 aa30■■■□□ 2.39
LSM7-206ENST00000591515 CASP8AP2Q9UKL3 1982 aa29.99■■■□□ 2.39
LSM7-206ENST00000591515 SNRPA1P09661 255 aaKnown RBP29.99■■■□□ 2.39
LSM7-206ENST00000591515 CYP4F22Q6NT55 531 aa29.99■■■□□ 2.39
LSM7-206ENST00000591515 PAXIP1Q6ZW49 1069 aaPredicted RBP29.99■■■□□ 2.39
LSM7-206ENST00000591515 WWC1Q8IX03 1113 aa29.99■■■□□ 2.39
LSM7-206ENST00000591515 IFT57Q9NWB7 429 aa29.99■■■□□ 2.39
LSM7-206ENST00000591515 MIS18AQ9NYP9 233 aa29.99■■■□□ 2.39
LSM7-206ENST00000591515 SCNN1DP51172 638 aa29.98■■■□□ 2.39
LSM7-206ENST00000591515 EIF6P56537 245 aaKnown RBP29.98■■■□□ 2.39
LSM7-206ENST00000591515 MLLT1Q03111 559 aaPredicted RBP29.98■■■□□ 2.39
LSM7-206ENST00000591515 HLFQ16534 295 aa29.98■■■□□ 2.39
LSM7-206ENST00000591515 CHL1O00533 1208 aa29.97■■■□□ 2.39
LSM7-206ENST00000591515 EPS15P42566 896 aa29.97■■■□□ 2.39
LSM7-206ENST00000591515 RGS19P49795 217 aa29.97■■■□□ 2.39
LSM7-206ENST00000591515 CRY2Q49AN0 593 aa29.97■■■□□ 2.39
LSM7-206ENST00000591515 IL16Q14005 1332 aa29.96■■■□□ 2.39
LSM7-206ENST00000591515 LMOD1P29536 600 aaPredicted RBP29.96■■■□□ 2.39
LSM7-206ENST00000591515 ECE1P42892 770 aa29.96■■■□□ 2.39
LSM7-206ENST00000591515 GRM1Q13255 1194 aa29.96■■■□□ 2.39
LSM7-206ENST00000591515 WDR63Q8IWG1 891 aa29.96■■■□□ 2.39
LSM7-206ENST00000591515 GPR101Q96P66 508 aaPredicted RBP29.96■■■□□ 2.39
LSM7-206ENST00000591515 SALL2Q9Y467 1007 aaPredicted RBP29.96■■■□□ 2.39
LSM7-206ENST00000591515 CST9Q5W186 159 aa29.95■■■□□ 2.39
LSM7-206ENST00000591515 BEGAINQ9BUH8 593 aa29.95■■■□□ 2.39
LSM7-206ENST00000591515 TRAF5O00463 557 aa29.94■■■□□ 2.38
LSM7-206ENST00000591515 EIF4A1P60842 406 aaKnown RBP29.94■■■□□ 2.38
LSM7-206ENST00000591515 TSKSQ9UJT2 592 aa29.94■■■□□ 2.38
LSM7-206ENST00000591515 GTF2E1P29083 439 aaPredicted RBP29.93■■■□□ 2.38
LSM7-206ENST00000591515 SLC51AQ86UW1 340 aa29.93■■■□□ 2.38
LSM7-206ENST00000591515 CC2D2BQ6DHV5 1058 aa29.92■■■□□ 2.38
LSM7-206ENST00000591515 NUTM1Q86Y26 1132 aa29.92■■■□□ 2.38
LSM7-206ENST00000591515 TLL2Q9Y6L7 1015 aa29.92■■■□□ 2.38
LSM7-206ENST00000591515 RIC1Q4ADV7 1423 aa29.9■■■□□ 2.38
LSM7-206ENST00000591515 AOC2O75106 756 aa29.9■■■□□ 2.38
LSM7-206ENST00000591515 ZNF853P0CG23 659 aa29.9■■■□□ 2.38
LSM7-206ENST00000591515 USP50Q70EL3 339 aaPredicted RBP29.9■■■□□ 2.38
LSM7-206ENST00000591515 LARGE2Q8N3Y3 721 aa29.9■■■□□ 2.38
LSM7-206ENST00000591515 CHMP4AQ9BY43 222 aa29.88■■■□□ 2.37
LSM7-206ENST00000591515 NYXQ9GZU5 481 aa29.88■■■□□ 2.37
LSM7-206ENST00000591515 MBIPQ9NS73 344 aa29.88■■■□□ 2.37
LSM7-206ENST00000591515 HOXA10P31260 410 aaPredicted RBP29.87■■■□□ 2.37
LSM7-206ENST00000591515 MAP2K2P36507 400 aa29.86■■■□□ 2.37
LSM7-206ENST00000591515 PDE4DIPQ5VU43 2346 aa29.86■■■□□ 2.37
LSM7-206ENST00000591515 RPGRQ92834 1020 aaKnown RBP29.85■■■□□ 2.37
LSM7-206ENST00000591515 MYH16Q9H6N6 1097 aa29.85■■■□□ 2.37
LSM7-206ENST00000591515 HOXB7P09629 217 aa29.84■■■□□ 2.37
LSM7-206ENST00000591515 MCOLN1Q9GZU1 580 aa29.84■■■□□ 2.37
LSM7-206ENST00000591515 IBTKQ9P2D0 1353 aaPredicted RBP29.84■■■□□ 2.37
LSM7-206ENST00000591515 GRIPAP1Q4V328 841 aa29.83■■■□□ 2.37
LSM7-206ENST00000591515 SAPCD2Q86UD0 394 aa29.83■■■□□ 2.37
LSM7-206ENST00000591515 NIM1KQ8IY84 436 aa29.83■■■□□ 2.37
LSM7-206ENST00000591515 UBN2Q6ZU65 1347 aa29.82■■■□□ 2.36
LSM7-206ENST00000591515 ADARB2Q9NS39 739 aaKnown RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms