RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 FAM177A1Q8N128 213 aaPredicted RBP20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 CCDC47Q96A33 483 aaKnown RBP20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 DACT1Q9NYF0 836 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 NUP133Q8WUM0 1156 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 METTL24Q5JXM2 366 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 COPS6Q7L5N1 327 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 KRT28Q7Z3Y7 464 aa20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 NOL10Q9BSC4 688 aaKnown RBP20.04■□□□□ 0.8
SMARCA4-215ENST00000590574 AOX1Q06278 1338 aa20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 RNF17Q9BXT8 1623 aaKnown RBP20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 FAM200AQ8TCP9 573 aa20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 ARHGEF10O15013 1369 aa20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 STX1AQ16623 288 aa20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 ZNF853P0CG23 659 aa20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 NACAP1Q9BZK3 213 aa20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 TMEM63CQ9P1W3 806 aa20.03■□□□□ 0.8
SMARCA4-215ENST00000590574 LINS1Q8NG48 757 aa20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 NOC3LQ8WTT2 800 aaKnown RBP20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 SGSM2O43147 1006 aa20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 GADD45BO75293 160 aaPredicted RBP20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 IFNL2Q8IZJ0 200 aa20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 AATKQ6ZMQ8 1374 aa20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 Q6ZUG5 572 aa20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 ZBTB3Q9H5J0 574 aa20.02■□□□□ 0.8
SMARCA4-215ENST00000590574 ATP7BP35670 1465 aa20.02■□□□□ 0.79
SMARCA4-215ENST00000590574 GOLGA8BA8MQT2 603 aa20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 SNRPA1P09661 255 aaKnown RBP20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 ZSCAN16Q9H4T2 348 aaPredicted RBP20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 NBPF7P0C2Y1 421 aaPredicted RBP20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 PALD1Q9ULE6 856 aa20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 ABCC3O15438 1527 aa20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 CCDC70Q6NSX1 233 aa20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 AIDAQ96BJ3 306 aa20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 BICC1Q9H694 974 aaKnown RBP20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 TRMT1Q9NXH9 659 aaKnown RBP20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 DACH1Q9UI36 760 aa20.01■□□□□ 0.79
SMARCA4-215ENST00000590574 SFPQP23246 707 aaKnown RBP eCLIP20■□□□□ 0.79
SMARCA4-215ENST00000590574 CFAP100Q494V2 611 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 FILIP1LQ4L180 1135 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 MTMR7Q9Y216 660 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 BRD1O95696 1058 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 SNRKQ9NRH2 765 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 CCDC171Q6TFL3 1326 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 RAD50Q92878 1312 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 HAND2P61296 217 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 CHAMP1Q96JM3 812 aa20■□□□□ 0.79
SMARCA4-215ENST00000590574 TDO2P48775 406 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 BABAM1Q9NWV8 329 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 QRICH2Q9H0J4 1663 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 HECW2Q9P2P5 1572 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 ZNF213O14771 459 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 HSPA4P34932 840 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 MPHOSPH8Q99549 860 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 GLI2P10070 1586 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 DTNBO60941 627 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 TYRO3Q06418 890 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 ARAP3Q8WWN8 1544 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 MCMDC2Q4G0Z9 681 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 CCDC186Q7Z3E2 898 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 LGR6Q9HBX8 967 aa19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 CWC25Q9NXE8 425 aaPredicted RBP19.99■□□□□ 0.79
SMARCA4-215ENST00000590574 POLR3DP05423 398 aaPredicted RBP19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 RAB11FIP4Q86YS3 637 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 IP6K1Q92551 441 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 PLEKHG3A1L390 1219 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 PPP4R3BQ5MIZ7 849 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 METP08581 1390 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 BIN1O00499 593 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 RNMTO43148 476 aaKnown RBP19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 DNAJC25Q9H1X3 360 aa19.98■□□□□ 0.79
SMARCA4-215ENST00000590574 IFIT5Q13325 482 aaKnown RBP19.97■□□□□ 0.79
SMARCA4-215ENST00000590574 CLSTN1O94985 981 aa19.97■□□□□ 0.79
SMARCA4-215ENST00000590574 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
SMARCA4-215ENST00000590574 KCNA6P17658 529 aa19.97■□□□□ 0.79
SMARCA4-215ENST00000590574 KIF18AQ8NI77 898 aa19.97■□□□□ 0.79
SMARCA4-215ENST00000590574 PPFIBP1Q86W92 1011 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 USP44Q9H0E7 712 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 USP16Q9Y5T5 823 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 NEMFO60524 1076 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 SMARCE1Q969G3 411 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 G3V3G9 751 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 DCAF8Q5TAQ9 597 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 PPP1R9BQ96SB3 815 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 CAVIN2O95810 425 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 WASF1Q92558 559 aa19.96■□□□□ 0.79
SMARCA4-215ENST00000590574 LMBR1LQ6UX01 489 aa19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 UBAC1Q9BSL1 405 aa19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 KIF2AO00139 706 aaPredicted RBP19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 SLC3A2P08195 630 aaKnown RBP19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 TFCP2Q12800 502 aa19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 TMX4Q9H1E5 349 aaPredicted RBP19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 STARD3NLO95772 234 aa19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 ORC3Q9UBD5 711 aaPredicted RBP19.95■□□□□ 0.78
SMARCA4-215ENST00000590574 SIRT1Q96EB6 747 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 FAM227BQ96M60 508 aa19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 IBTKQ9P2D0 1353 aaPredicted RBP19.94■□□□□ 0.78
SMARCA4-215ENST00000590574 ADGRB3O60242 1522 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms